RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 NISCHQ9Y2I1 1504 aa53.63■■■■■ 6.18
SYNGR3-202ENST00000562045 CCDC180Q9P1Z9 1646 aa47.48■■■■■ 5.19
SYNGR3-202ENST00000562045 ABCC9O60706 1549 aa46.21■■■■■ 4.99
SYNGR3-202ENST00000562045 ZCCHC6Q5VYS8 1495 aaKnown RBP44.75■■■■■ 4.75
SYNGR3-202ENST00000562045 DCAF8L2P0C7V8 631 aa44.68■■■■■ 4.74
SYNGR3-202ENST00000562045 NACADO15069 1562 aa44.52■■■■■ 4.72
SYNGR3-202ENST00000562045 RB1CC1Q8TDY2 1594 aa44.5■■■■■ 4.71
SYNGR3-202ENST00000562045 MYO15BQ96JP2 1530 aa44.33■■■■■ 4.69
SYNGR3-202ENST00000562045 DCAF1Q9Y4B6 1507 aa44.3■■■■■ 4.68
SYNGR3-202ENST00000562045 UNC13AQ9UPW8 1703 aa43.69■■■■■ 4.59
SYNGR3-202ENST00000562045 SCRIBQ14160 1630 aa43.47■■■■■ 4.55
SYNGR3-202ENST00000562045 BICRAQ9NZM4 1560 aa43.28■■■■■ 4.52
SYNGR3-202ENST00000562045 PABPN1Q86U42 306 aaKnown RBP eCLIP43.26■■■■■ 4.52
SYNGR3-202ENST00000562045 SHROOM4Q9ULL8 1493 aa42.69■■■■■ 4.42
SYNGR3-202ENST00000562045 DNAJC5BQ9UF47 199 aa42.17■■■■■ 4.34
SYNGR3-202ENST00000562045 EIF4G1Q04637 1599 aaKnown RBP42.05■■■■■ 4.32
SYNGR3-202ENST00000562045 CECR2Q9BXF3 1484 aa41.83■■■■■ 4.29
SYNGR3-202ENST00000562045 CC2D2AQ9P2K1 1620 aa41.81■■■■■ 4.28
SYNGR3-202ENST00000562045 SMARCA4P51532 1647 aa41.56■■■■■ 4.24
SYNGR3-202ENST00000562045 BAZ1AQ9NRL2 1556 aaPredicted RBP41.5■■■■■ 4.23
SYNGR3-202ENST00000562045 MROH2BQ7Z745 1585 aa41.41■■■■■ 4.22
SYNGR3-202ENST00000562045 ATAD2BQ9ULI0 1458 aa41.22■■■■■ 4.19
SYNGR3-202ENST00000562045 SMARCA2P51531 1590 aa41.11■■■■■ 4.17
SYNGR3-202ENST00000562045 PEG3Q9GZU2 1588 aa41.1■■■■■ 4.17
SYNGR3-202ENST00000562045 NCAPD3P42695 1498 aa41.09■■■■■ 4.17
SYNGR3-202ENST00000562045 RSF1Q96T23 1441 aaPredicted RBP41.02■■■■■ 4.16
SYNGR3-202ENST00000562045 WIZO95785 1651 aa41.02■■■■■ 4.16
SYNGR3-202ENST00000562045 HMGXB3Q12766 1538 aa40.93■■■■■ 4.14
SYNGR3-202ENST00000562045 BAZ1BQ9UIG0 1483 aaKnown RBP40.87■■■■■ 4.13
SYNGR3-202ENST00000562045 TOP2AP11388 1531 aaKnown RBP40.49■■■■■ 4.07
SYNGR3-202ENST00000562045 SUPT5HO00267 1087 aaKnown RBP40.28■■■■■ 4.04
SYNGR3-202ENST00000562045 NESP48681 1621 aa40.15■■■■■ 4.02
SYNGR3-202ENST00000562045 CCDC88BA6NC98 1476 aa40.05■■■■■ 4
SYNGR3-202ENST00000562045 LAMC3Q9Y6N6 1575 aa39.95■■■■□ 3.99
SYNGR3-202ENST00000562045 CADPSQ9ULU8 1353 aa39.92■■■■□ 3.98
SYNGR3-202ENST00000562045 CFTRP13569 1480 aa39.78■■■■□ 3.96
SYNGR3-202ENST00000562045 ERCC6Q03468 1493 aa39.71■■■■□ 3.95
SYNGR3-202ENST00000562045 KIF21AQ7Z4S6 1674 aa39.68■■■■□ 3.94
SYNGR3-202ENST00000562045 PDS5BQ9NTI5 1447 aa39.63■■■■□ 3.93
SYNGR3-202ENST00000562045 PRDM2Q13029 1718 aa39.56■■■■□ 3.92
SYNGR3-202ENST00000562045 FANCD2Q9BXW9 1451 aa39.5■■■■□ 3.91
SYNGR3-202ENST00000562045 THOC2Q8NI27 1593 aaKnown RBP39.41■■■■□ 3.9
SYNGR3-202ENST00000562045 CEP164Q9UPV0 1460 aa39.38■■■■□ 3.9
SYNGR3-202ENST00000562045 MRC2Q9UBG0 1479 aa39.25■■■■□ 3.87
SYNGR3-202ENST00000562045 WDR62O43379 1518 aa39.14■■■■□ 3.86
SYNGR3-202ENST00000562045 URB2Q14146 1524 aaKnown RBP39.14■■■■□ 3.86
SYNGR3-202ENST00000562045 CUX2O14529 1486 aa39.12■■■■□ 3.85
SYNGR3-202ENST00000562045 TOPBP1Q92547 1522 aa38.93■■■■□ 3.82
SYNGR3-202ENST00000562045 DNMBPQ6XZF7 1577 aa38.88■■■■□ 3.81
SYNGR3-202ENST00000562045 CUX1P39880 1505 aa38.81■■■■□ 3.8
SYNGR3-202ENST00000562045 ABCC8Q09428 1581 aa38.8■■■■□ 3.8
SYNGR3-202ENST00000562045 POLA1P09884 1462 aaPredicted RBP38.62■■■■□ 3.77
SYNGR3-202ENST00000562045 WRNQ14191 1432 aaPredicted RBP eCLIP38.62■■■■□ 3.77
SYNGR3-202ENST00000562045 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
SYNGR3-202ENST00000562045 FGD5Q6ZNL6 1462 aa38.59■■■■□ 3.77
SYNGR3-202ENST00000562045 TOP2BQ02880 1626 aa38.53■■■■□ 3.76
SYNGR3-202ENST00000562045 BIVM-ERCC5R4GMW8 1640 aa38.53■■■■□ 3.76
SYNGR3-202ENST00000562045 IFT140Q96RY7 1462 aa38.52■■■■□ 3.76
SYNGR3-202ENST00000562045 TARBP1Q13395 1621 aaKnown RBP38.51■■■■□ 3.75
SYNGR3-202ENST00000562045 RAD54L2Q9Y4B4 1467 aa38.51■■■■□ 3.75
SYNGR3-202ENST00000562045 ZNF608Q9ULD9 1512 aaPredicted RBP38.45■■■■□ 3.75
SYNGR3-202ENST00000562045 SOGA1O94964 1423 aa38.43■■■■□ 3.74
SYNGR3-202ENST00000562045 WDR97A6NE52 1622 aa38.3■■■■□ 3.72
SYNGR3-202ENST00000562045 EIF4G3O43432 1585 aaKnown RBP38.28■■■■□ 3.72
SYNGR3-202ENST00000562045 AQRO60306 1485 aaKnown RBP eCLIP38.25■■■■□ 3.71
SYNGR3-202ENST00000562045 TDRD9Q8NDG6 1382 aaKnown RBP38.23■■■■□ 3.71
SYNGR3-202ENST00000562045 ABCA10Q8WWZ4 1543 aa38.19■■■■□ 3.7
SYNGR3-202ENST00000562045 ABCA5Q8WWZ7 1642 aa38.06■■■■□ 3.68
SYNGR3-202ENST00000562045 GAPVD1Q14C86 1478 aa38■■■■□ 3.67
SYNGR3-202ENST00000562045 PBRM1Q86U86 1689 aa37.97■■■■□ 3.67
SYNGR3-202ENST00000562045 TRIM41Q8WV44 630 aa37.93■■■■□ 3.66
SYNGR3-202ENST00000562045 GRIN2BQ13224 1484 aa37.91■■■■□ 3.66
SYNGR3-202ENST00000562045 CHIC1Q5VXU3 224 aa37.91■■■■□ 3.66
SYNGR3-202ENST00000562045 SNAPC4Q5SXM2 1469 aa37.88■■■■□ 3.65
SYNGR3-202ENST00000562045 CHD1O14646 1710 aa37.77■■■■□ 3.64
SYNGR3-202ENST00000562045 MAGI1Q96QZ7 1491 aaPredicted RBP37.76■■■■□ 3.64
SYNGR3-202ENST00000562045 KIF27Q86VH2 1401 aa37.74■■■■□ 3.63
SYNGR3-202ENST00000562045 ERICH3Q5RHP9 1530 aa37.71■■■■□ 3.63
SYNGR3-202ENST00000562045 RUSC2Q8N2Y8 1516 aa37.71■■■■□ 3.63
SYNGR3-202ENST00000562045 FBLN2P98095 1184 aa37.67■■■■□ 3.62
SYNGR3-202ENST00000562045 ADAMTS12P58397 1594 aa37.66■■■■□ 3.62
SYNGR3-202ENST00000562045 SYNJ2O15056 1496 aa37.64■■■■□ 3.62
SYNGR3-202ENST00000562045 IGF1RP08069 1367 aa37.61■■■■□ 3.61
SYNGR3-202ENST00000562045 CHMP7Q8WUX9 453 aaPredicted RBP37.58■■■■□ 3.61
SYNGR3-202ENST00000562045 OSCARQ8IYS5 282 aa37.57■■■■□ 3.6
SYNGR3-202ENST00000562045 DNAJC5Q9H3Z4 198 aa37.55■■■■□ 3.6
SYNGR3-202ENST00000562045 FHAD1B1AJZ9 1412 aa37.54■■■■□ 3.6
SYNGR3-202ENST00000562045 GRIN2AQ12879 1464 aa37.47■■■■□ 3.59
SYNGR3-202ENST00000562045 CUL7Q14999 1698 aa37.45■■■■□ 3.59
SYNGR3-202ENST00000562045 CARMIL1Q5VZK9 1371 aa37.36■■■■□ 3.57
SYNGR3-202ENST00000562045 CEP170Q5SW79 1584 aa37.34■■■■□ 3.57
SYNGR3-202ENST00000562045 CLASP1Q7Z460 1538 aa37.31■■■■□ 3.56
SYNGR3-202ENST00000562045 NUP160Q12769 1436 aa37.27■■■■□ 3.56
SYNGR3-202ENST00000562045 FAM9AQ8IZU1 332 aaPredicted RBP37.26■■■■□ 3.56
SYNGR3-202ENST00000562045 EEA1Q15075 1411 aa37.19■■■■□ 3.54
SYNGR3-202ENST00000562045 CSRNP3Q8WYN3 585 aa37.19■■■■□ 3.54
SYNGR3-202ENST00000562045 RAPGEF2Q9Y4G8 1499 aa37.17■■■■□ 3.54
SYNGR3-202ENST00000562045 PRXQ9BXM0 1461 aa37.17■■■■□ 3.54
SYNGR3-202ENST00000562045 RIMBP3CA6NJZ7 1639 aa37.05■■■■□ 3.52
SYNGR3-202ENST00000562045 RIMBP3BA6NNM3 1639 aa37.05■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms