RNA–Protein interactions for RNA: ENST00000397854.7

ITGB2-207, Transcript of integrin subunit beta 2, humanhuman

TSL 1 (best) BASIC

Gene ITGB2, Length 2,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-207ENST00000397854 NISCHQ9Y2I1 1504 aa31.29■■■□□ 2.6
ITGB2-207ENST00000397854 PELP1Q8IZL8 1130 aaKnown RBP27.11■■□□□ 1.93
ITGB2-207ENST00000397854 HRCP23327 699 aa27.06■■□□□ 1.92
ITGB2-207ENST00000397854 SHROOM4Q9ULL8 1493 aa26.8■■□□□ 1.88
ITGB2-207ENST00000397854 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
ITGB2-207ENST00000397854 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
ITGB2-207ENST00000397854 MYT1Q01538 1121 aa26.3■■□□□ 1.8
ITGB2-207ENST00000397854 PPARGC1BQ86YN6 1023 aaKnown RBP26.24■■□□□ 1.79
ITGB2-207ENST00000397854 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
ITGB2-207ENST00000397854 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
ITGB2-207ENST00000397854 PCGF6Q9BYE7 350 aa26.06■■□□□ 1.76
ITGB2-207ENST00000397854 SCAF1Q9H7N4 1312 aaKnown RBP25.81■■□□□ 1.72
ITGB2-207ENST00000397854 MYO15BQ96JP2 1530 aa25.77■■□□□ 1.72
ITGB2-207ENST00000397854 DCAF1Q9Y4B6 1507 aa25.55■■□□□ 1.68
ITGB2-207ENST00000397854 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
ITGB2-207ENST00000397854 ZEB1P37275 1124 aaPredicted RBP25.36■■□□□ 1.65
ITGB2-207ENST00000397854 TRIM26Q12899 539 aaPredicted RBP25.25■■□□□ 1.63
ITGB2-207ENST00000397854 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
ITGB2-207ENST00000397854 SCRIBQ14160 1630 aa25.08■■□□□ 1.61
ITGB2-207ENST00000397854 ABCC9O60706 1549 aa24.95■■□□□ 1.59
ITGB2-207ENST00000397854 NEUROD1Q13562 356 aa24.9■■□□□ 1.58
ITGB2-207ENST00000397854 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
ITGB2-207ENST00000397854 GTF3C3Q9Y5Q9 886 aa24.82■■□□□ 1.56
ITGB2-207ENST00000397854 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
ITGB2-207ENST00000397854 LOC105371045A0A1W2PR82 267 aa24.75■■□□□ 1.55
ITGB2-207ENST00000397854 CENPBP07199 599 aaPredicted RBP24.75■■□□□ 1.55
ITGB2-207ENST00000397854 NACADO15069 1562 aa24.6■■□□□ 1.53
ITGB2-207ENST00000397854 CECR2Q9BXF3 1484 aa24.54■■□□□ 1.52
ITGB2-207ENST00000397854 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
ITGB2-207ENST00000397854 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
ITGB2-207ENST00000397854 DIEXFQ68CQ4 756 aaKnown RBP24.32■■□□□ 1.48
ITGB2-207ENST00000397854 WIZO95785 1651 aa24.29■■□□□ 1.48
ITGB2-207ENST00000397854 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
ITGB2-207ENST00000397854 BCL11AQ9H165 835 aa24.26■■□□□ 1.47
ITGB2-207ENST00000397854 FAM9AQ8IZU1 332 aaPredicted RBP24.23■■□□□ 1.47
ITGB2-207ENST00000397854 EHMT2Q96KQ7 1210 aa24.14■■□□□ 1.45
ITGB2-207ENST00000397854 UNC13AQ9UPW8 1703 aa24.06■■□□□ 1.44
ITGB2-207ENST00000397854 CCER1Q8TC90 406 aaPredicted RBP24.01■■□□□ 1.43
ITGB2-207ENST00000397854 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
ITGB2-207ENST00000397854 ANP32EQ9BTT0 268 aa23.98■■□□□ 1.43
ITGB2-207ENST00000397854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.95■■□□□ 1.42
ITGB2-207ENST00000397854 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
ITGB2-207ENST00000397854 SMARCA4P51532 1647 aa23.87■■□□□ 1.41
ITGB2-207ENST00000397854 YTHDC1Q96MU7 727 aaKnown RBP23.84■■□□□ 1.41
ITGB2-207ENST00000397854 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
ITGB2-207ENST00000397854 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
ITGB2-207ENST00000397854 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
ITGB2-207ENST00000397854 CLSPNQ9HAW4 1339 aa23.77■■□□□ 1.4
ITGB2-207ENST00000397854 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
ITGB2-207ENST00000397854 BICRAQ9NZM4 1560 aa23.73■■□□□ 1.39
ITGB2-207ENST00000397854 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
ITGB2-207ENST00000397854 SMARCA2P51531 1590 aa23.7■■□□□ 1.38
ITGB2-207ENST00000397854 PRKCSHP14314 528 aaPredicted RBP23.67■■□□□ 1.38
ITGB2-207ENST00000397854 CSRNP3Q8WYN3 585 aa23.64■■□□□ 1.37
ITGB2-207ENST00000397854 TSHZ2Q9NRE2 1034 aa23.61■■□□□ 1.37
ITGB2-207ENST00000397854 MIER1Q8N108 512 aa23.59■■□□□ 1.37
ITGB2-207ENST00000397854 SUPT16HQ9Y5B9 1047 aaKnown RBP23.55■■□□□ 1.36
ITGB2-207ENST00000397854 SOGA1O94964 1423 aa23.45■■□□□ 1.35
ITGB2-207ENST00000397854 RUSC2Q8N2Y8 1516 aa23.4■■□□□ 1.34
ITGB2-207ENST00000397854 ERICH6Q7L0X2 663 aa23.34■■□□□ 1.33
ITGB2-207ENST00000397854 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.33
ITGB2-207ENST00000397854 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
ITGB2-207ENST00000397854 WRNQ14191 1432 aaPredicted RBP eCLIP23.22■■□□□ 1.31
ITGB2-207ENST00000397854 BAZ1BQ9UIG0 1483 aaKnown RBP23.22■■□□□ 1.31
ITGB2-207ENST00000397854 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
ITGB2-207ENST00000397854 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
ITGB2-207ENST00000397854 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
ITGB2-207ENST00000397854 TNIKQ9UKE5 1360 aa23.1■■□□□ 1.29
ITGB2-207ENST00000397854 EEA1Q15075 1411 aa23.06■■□□□ 1.28
ITGB2-207ENST00000397854 APLP2Q06481 763 aa23.01■■□□□ 1.27
ITGB2-207ENST00000397854 GOLGA3Q08378 1498 aa23■■□□□ 1.27
ITGB2-207ENST00000397854 RBM19Q9Y4C8 960 aaKnown RBP22.98■■□□□ 1.27
ITGB2-207ENST00000397854 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
ITGB2-207ENST00000397854 CEP164Q9UPV0 1460 aa22.88■■□□□ 1.25
ITGB2-207ENST00000397854 RAPGEF2Q9Y4G8 1499 aa22.86■■□□□ 1.25
ITGB2-207ENST00000397854 MYT1LQ9UL68 1186 aa22.86■■□□□ 1.25
ITGB2-207ENST00000397854 KIF21BO75037 1637 aa22.85■■□□□ 1.25
ITGB2-207ENST00000397854 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
ITGB2-207ENST00000397854 BCANQ96GW7 911 aa22.82■■□□□ 1.24
ITGB2-207ENST00000397854 NCAPD3P42695 1498 aa22.81■■□□□ 1.24
ITGB2-207ENST00000397854 MSH5O43196 834 aa22.81■■□□□ 1.24
ITGB2-207ENST00000397854 CLIP1P30622 1438 aa22.79■■□□□ 1.24
ITGB2-207ENST00000397854 HMGXB3Q12766 1538 aa22.76■■□□□ 1.23
ITGB2-207ENST00000397854 FKBP8Q14318 412 aa22.76■■□□□ 1.23
ITGB2-207ENST00000397854 BIVM-ERCC5R4GMW8 1640 aa22.73■■□□□ 1.23
ITGB2-207ENST00000397854 FANCIQ9NVI1 1328 aa22.72■■□□□ 1.23
ITGB2-207ENST00000397854 CUX1P39880 1505 aa22.71■■□□□ 1.23
ITGB2-207ENST00000397854 HNRNPUL2Q1KMD3 747 aaKnown RBP22.66■■□□□ 1.22
ITGB2-207ENST00000397854 NEFLP07196 543 aa22.64■■□□□ 1.22
ITGB2-207ENST00000397854 VPS8Q8N3P4 1428 aa22.63■■□□□ 1.21
ITGB2-207ENST00000397854 CFTRP13569 1480 aa22.62■■□□□ 1.21
ITGB2-207ENST00000397854 DEKP35659 375 aaKnown RBP22.61■■□□□ 1.21
ITGB2-207ENST00000397854 ANO8Q9HCE9 1232 aaPredicted RBP22.61■■□□□ 1.21
ITGB2-207ENST00000397854 PRXQ9BXM0 1461 aa22.56■■□□□ 1.2
ITGB2-207ENST00000397854 ERICH6BQ5W0A0 696 aa22.54■■□□□ 1.2
ITGB2-207ENST00000397854 ITGAEP38570 1179 aa22.48■■□□□ 1.19
ITGB2-207ENST00000397854 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
ITGB2-207ENST00000397854 KIF27Q86VH2 1401 aa22.47■■□□□ 1.19
ITGB2-207ENST00000397854 KCNH8Q96L42 1107 aa22.47■■□□□ 1.19
ITGB2-207ENST00000397854 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms