RNA–Protein interactions for RNA: ENST00000310496.8

RFNG-201, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFNG, Length 1,828 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-201ENST00000310496 NISCHQ9Y2I1 1504 aa53.98■■■■■ 6.23
RFNG-201ENST00000310496 CCDC180Q9P1Z9 1646 aa47.23■■■■■ 5.15
RFNG-201ENST00000310496 ZCCHC6Q5VYS8 1495 aaKnown RBP45.27■■■■■ 4.84
RFNG-201ENST00000310496 ABCC9O60706 1549 aa45.03■■■■■ 4.8
RFNG-201ENST00000310496 DCAF1Q9Y4B6 1507 aa44.67■■■■■ 4.74
RFNG-201ENST00000310496 DCAF8L2P0C7V8 631 aa44.59■■■■■ 4.73
RFNG-201ENST00000310496 MYO15BQ96JP2 1530 aa44.31■■■■■ 4.68
RFNG-201ENST00000310496 NACADO15069 1562 aa44.11■■■■■ 4.65
RFNG-201ENST00000310496 RB1CC1Q8TDY2 1594 aa43.81■■■■■ 4.6
RFNG-201ENST00000310496 SHROOM4Q9ULL8 1493 aa43.64■■■■■ 4.58
RFNG-201ENST00000310496 SCRIBQ14160 1630 aa43.35■■■■■ 4.53
RFNG-201ENST00000310496 UNC13AQ9UPW8 1703 aa42.87■■■■■ 4.45
RFNG-201ENST00000310496 BICRAQ9NZM4 1560 aa42.54■■■■■ 4.4
RFNG-201ENST00000310496 PABPN1Q86U42 306 aaKnown RBP eCLIP42.37■■■■■ 4.372e-8■□□□□ 10.2
RFNG-201ENST00000310496 CECR2Q9BXF3 1484 aa41.97■■■■■ 4.31
RFNG-201ENST00000310496 SUPT5HO00267 1087 aaKnown RBP41.77■■■■■ 4.28
RFNG-201ENST00000310496 RSF1Q96T23 1441 aaPredicted RBP41.71■■■■■ 4.27
RFNG-201ENST00000310496 BAZ1AQ9NRL2 1556 aaPredicted RBP41.69■■■■■ 4.26
RFNG-201ENST00000310496 MROH2BQ7Z745 1585 aa41.68■■■■■ 4.26
RFNG-201ENST00000310496 SMARCA4P51532 1647 aa41.56■■■■■ 4.24
RFNG-201ENST00000310496 WIZO95785 1651 aa41.27■■■■■ 4.2
RFNG-201ENST00000310496 EIF4G1Q04637 1599 aaKnown RBP41.27■■■■■ 4.2
RFNG-201ENST00000310496 PEG3Q9GZU2 1588 aa41.12■■■■■ 4.17
RFNG-201ENST00000310496 ATAD2BQ9ULI0 1458 aa41.01■■■■■ 4.16
RFNG-201ENST00000310496 SMARCA2P51531 1590 aa40.95■■■■■ 4.15
RFNG-201ENST00000310496 TOP2AP11388 1531 aaKnown RBP40.87■■■■■ 4.13
RFNG-201ENST00000310496 NCAPD3P42695 1498 aa40.75■■■■■ 4.11
RFNG-201ENST00000310496 CC2D2AQ9P2K1 1620 aa40.74■■■■■ 4.11
RFNG-201ENST00000310496 BAZ1BQ9UIG0 1483 aaKnown RBP40.72■■■■■ 4.11
RFNG-201ENST00000310496 HMGXB3Q12766 1538 aa40.64■■■■■ 4.1
RFNG-201ENST00000310496 CCDC88BA6NC98 1476 aa40.45■■■■■ 4.07
RFNG-201ENST00000310496 DNAJC5BQ9UF47 199 aa40.14■■■■■ 4.02
RFNG-201ENST00000310496 CHIC1Q5VXU3 224 aa39.83■■■■□ 3.97
RFNG-201ENST00000310496 CFTRP13569 1480 aa39.72■■■■□ 3.95
RFNG-201ENST00000310496 CADPSQ9ULU8 1353 aa39.65■■■■□ 3.94
RFNG-201ENST00000310496 ABCC8Q09428 1581 aa39.43■■■■□ 3.9
RFNG-201ENST00000310496 NESP48681 1621 aa39.41■■■■□ 3.9
RFNG-201ENST00000310496 PRDM2Q13029 1718 aa39.39■■■■□ 3.9
RFNG-201ENST00000310496 LAMC3Q9Y6N6 1575 aa39.39■■■■□ 3.9
RFNG-201ENST00000310496 TRIM41Q8WV44 630 aa39.33■■■■□ 3.89
RFNG-201ENST00000310496 WRNQ14191 1432 aaPredicted RBP eCLIP39.26■■■■□ 3.87
RFNG-201ENST00000310496 FANCD2Q9BXW9 1451 aa39.19■■■■□ 3.86
RFNG-201ENST00000310496 SYNJ1O43426 1573 aa39.1■■■■□ 3.85
RFNG-201ENST00000310496 PDS5BQ9NTI5 1447 aa39.1■■■■□ 3.85
RFNG-201ENST00000310496 CUX1P39880 1505 aa38.99■■■■□ 3.83
RFNG-201ENST00000310496 TOP2BQ02880 1626 aa38.98■■■■□ 3.83
RFNG-201ENST00000310496 CEP164Q9UPV0 1460 aa38.98■■■■□ 3.83
RFNG-201ENST00000310496 BIVM-ERCC5R4GMW8 1640 aa38.95■■■■□ 3.83
RFNG-201ENST00000310496 KIF21AQ7Z4S6 1674 aa38.9■■■■□ 3.82
RFNG-201ENST00000310496 DNMBPQ6XZF7 1577 aa38.76■■■■□ 3.8
RFNG-201ENST00000310496 URB2Q14146 1524 aaKnown RBP38.74■■■■□ 3.79
RFNG-201ENST00000310496 TOPBP1Q92547 1522 aa38.73■■■■□ 3.79
RFNG-201ENST00000310496 ERCC6Q03468 1493 aa38.63■■■■□ 3.77
RFNG-201ENST00000310496 MRC2Q9UBG0 1479 aa38.63■■■■□ 3.77
RFNG-201ENST00000310496 SOGA1O94964 1423 aa38.62■■■■□ 3.77
RFNG-201ENST00000310496 FGD5Q6ZNL6 1462 aa38.62■■■■□ 3.77
RFNG-201ENST00000310496 FAM9AQ8IZU1 332 aaPredicted RBP38.56■■■■□ 3.76
RFNG-201ENST00000310496 POLA1P09884 1462 aaPredicted RBP38.52■■■■□ 3.76
RFNG-201ENST00000310496 RUSC2Q8N2Y8 1516 aa38.5■■■■□ 3.75
RFNG-201ENST00000310496 EEA1Q15075 1411 aa38.47■■■■□ 3.75
RFNG-201ENST00000310496 WDR62O43379 1518 aa38.46■■■■□ 3.75
RFNG-201ENST00000310496 THOC2Q8NI27 1593 aaKnown RBP38.42■■■■□ 3.74
RFNG-201ENST00000310496 RAD54L2Q9Y4B4 1467 aa38.37■■■■□ 3.73
RFNG-201ENST00000310496 ABCA10Q8WWZ4 1543 aa38.3■■■■□ 3.72
RFNG-201ENST00000310496 KIF27Q86VH2 1401 aa38.29■■■■□ 3.72
RFNG-201ENST00000310496 CSRNP3Q8WYN3 585 aa38.28■■■■□ 3.72
RFNG-201ENST00000310496 CUX2O14529 1486 aa38.28■■■■□ 3.72
RFNG-201ENST00000310496 LOC105371045A0A1W2PR82 267 aa38.25■■■■□ 3.71
RFNG-201ENST00000310496 TARBP1Q13395 1621 aaKnown RBP38.19■■■■□ 3.7
RFNG-201ENST00000310496 WDR97A6NE52 1622 aa38.18■■■■□ 3.7
RFNG-201ENST00000310496 IFT140Q96RY7 1462 aa38.09■■■■□ 3.69
RFNG-201ENST00000310496 IGF1RP08069 1367 aa38.03■■■■□ 3.68
RFNG-201ENST00000310496 TDRD9Q8NDG6 1382 aaKnown RBP38.03■■■■□ 3.68
RFNG-201ENST00000310496 ABCA5Q8WWZ7 1642 aa38.01■■■■□ 3.68
RFNG-201ENST00000310496 EHMT2Q96KQ7 1210 aa37.99■■■■□ 3.67
RFNG-201ENST00000310496 KIF21BO75037 1637 aa37.98■■■■□ 3.67
RFNG-201ENST00000310496 PRXQ9BXM0 1461 aa37.97■■■■□ 3.67
RFNG-201ENST00000310496 GAPVD1Q14C86 1478 aa37.94■■■■□ 3.66
RFNG-201ENST00000310496 ZNF608Q9ULD9 1512 aaPredicted RBP37.9■■■■□ 3.66
RFNG-201ENST00000310496 GOLGA3Q08378 1498 aa37.9■■■■□ 3.66
RFNG-201ENST00000310496 AQRO60306 1485 aaKnown RBP eCLIP37.86■■■■□ 3.658e-10■■■■□ 22.4
RFNG-201ENST00000310496 RAPGEF2Q9Y4G8 1499 aa37.86■■■■□ 3.65
RFNG-201ENST00000310496 ERICH3Q5RHP9 1530 aa37.83■■■■□ 3.65
RFNG-201ENST00000310496 CARMIL1Q5VZK9 1371 aa37.81■■■■□ 3.64
RFNG-201ENST00000310496 EIF4G3O43432 1585 aaKnown RBP37.74■■■■□ 3.63
RFNG-201ENST00000310496 CUL7Q14999 1698 aa37.73■■■■□ 3.63
RFNG-201ENST00000310496 TNIKQ9UKE5 1360 aa37.72■■■■□ 3.63
RFNG-201ENST00000310496 GRIN2BQ13224 1484 aa37.72■■■■□ 3.63
RFNG-201ENST00000310496 PBRM1Q86U86 1689 aa37.71■■■■□ 3.63
RFNG-201ENST00000310496 UBTFP17480 764 aaKnown RBP37.7■■■■□ 3.63
RFNG-201ENST00000310496 FHAD1B1AJZ9 1412 aa37.54■■■■□ 3.6
RFNG-201ENST00000310496 ADAMTS12P58397 1594 aa37.54■■■■□ 3.6
RFNG-201ENST00000310496 SNAPC4Q5SXM2 1469 aa37.51■■■■□ 3.6
RFNG-201ENST00000310496 CEP162Q5TB80 1403 aa37.47■■■■□ 3.59
RFNG-201ENST00000310496 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
RFNG-201ENST00000310496 SYNJ2O15056 1496 aa37.31■■■■□ 3.56
RFNG-201ENST00000310496 CLIP1P30622 1438 aa37.28■■■■□ 3.56
RFNG-201ENST00000310496 GRIN2AQ12879 1464 aa37.25■■■■□ 3.55
RFNG-201ENST00000310496 CTTNBP2Q8WZ74 1663 aa37.21■■■■□ 3.55
RFNG-201ENST00000310496 CHMP7Q8WUX9 453 aaPredicted RBP37.2■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms