RNA–Protein interactions for RNA: ENST00000638711.1

AC006001.3-204, humanhuman

TSL 5 BASIC

Gene AC006001.3, Length 2,103 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-204ENST00000638711 NISCHQ9Y2I1 1504 aa43.19■■■■■ 4.5
AC006001.3-204ENST00000638711 CCDC180Q9P1Z9 1646 aa37.31■■■■□ 3.56
AC006001.3-204ENST00000638711 ZCCHC6Q5VYS8 1495 aaKnown RBP36.42■■■■□ 3.42
AC006001.3-204ENST00000638711 DCAF1Q9Y4B6 1507 aa35.72■■■■□ 3.31
AC006001.3-204ENST00000638711 SHROOM4Q9ULL8 1493 aa35.67■■■■□ 3.3
AC006001.3-204ENST00000638711 DCAF8L2P0C7V8 631 aa35.46■■■■□ 3.27
AC006001.3-204ENST00000638711 MYO15BQ96JP2 1530 aa35.07■■■■□ 3.2
AC006001.3-204ENST00000638711 ABCC9O60706 1549 aa34.83■■■■□ 3.17
AC006001.3-204ENST00000638711 NACADO15069 1562 aa34.65■■■■□ 3.14
AC006001.3-204ENST00000638711 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
AC006001.3-204ENST00000638711 SCRIBQ14160 1630 aa34.44■■■■□ 3.1
AC006001.3-204ENST00000638711 RB1CC1Q8TDY2 1594 aa34.2■■■■□ 3.07
AC006001.3-204ENST00000638711 RSF1Q96T23 1441 aaPredicted RBP33.77■■■■□ 3
AC006001.3-204ENST00000638711 CECR2Q9BXF3 1484 aa33.55■■■□□ 2.96
AC006001.3-204ENST00000638711 CHIC1Q5VXU3 224 aa33.46■■■□□ 2.95
AC006001.3-204ENST00000638711 UNC13AQ9UPW8 1703 aa33.45■■■□□ 2.95
AC006001.3-204ENST00000638711 MROH2BQ7Z745 1585 aa33.41■■■□□ 2.94
AC006001.3-204ENST00000638711 BAZ1AQ9NRL2 1556 aaPredicted RBP33.29■■■□□ 2.92
AC006001.3-204ENST00000638711 BICRAQ9NZM4 1560 aa33.2■■■□□ 2.91
AC006001.3-204ENST00000638711 WIZO95785 1651 aa33.12■■■□□ 2.89
AC006001.3-204ENST00000638711 SMARCA4P51532 1647 aa33.05■■■□□ 2.88
AC006001.3-204ENST00000638711 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.87
AC006001.3-204ENST00000638711 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.84
AC006001.3-204ENST00000638711 PEG3Q9GZU2 1588 aa32.64■■■□□ 2.82
AC006001.3-204ENST00000638711 SMARCA2P51531 1590 aa32.53■■■□□ 2.8
AC006001.3-204ENST00000638711 EIF4G1Q04637 1599 aaKnown RBP32.53■■■□□ 2.8
AC006001.3-204ENST00000638711 CCDC88BA6NC98 1476 aa32.51■■■□□ 2.8
AC006001.3-204ENST00000638711 TRIM41Q8WV44 630 aa32.48■■■□□ 2.79
AC006001.3-204ENST00000638711 ATAD2BQ9ULI0 1458 aa32.4■■■□□ 2.78
AC006001.3-204ENST00000638711 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
AC006001.3-204ENST00000638711 LOC105371045A0A1W2PR82 267 aa32.2■■■□□ 2.74
AC006001.3-204ENST00000638711 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
AC006001.3-204ENST00000638711 HMGXB3Q12766 1538 aa32■■■□□ 2.71
AC006001.3-204ENST00000638711 ABCC8Q09428 1581 aa32■■■□□ 2.71
AC006001.3-204ENST00000638711 FAM9AQ8IZU1 332 aaPredicted RBP31.91■■■□□ 2.7
AC006001.3-204ENST00000638711 WRNQ14191 1432 aaPredicted RBP eCLIP31.75■■■□□ 2.67
AC006001.3-204ENST00000638711 EEA1Q15075 1411 aa31.6■■■□□ 2.65
AC006001.3-204ENST00000638711 SYNJ1O43426 1573 aa31.58■■■□□ 2.65
AC006001.3-204ENST00000638711 SOGA1O94964 1423 aa31.56■■■□□ 2.64
AC006001.3-204ENST00000638711 CC2D2AQ9P2K1 1620 aa31.5■■■□□ 2.63
AC006001.3-204ENST00000638711 CFTRP13569 1480 aa31.48■■■□□ 2.63
AC006001.3-204ENST00000638711 EHMT2Q96KQ7 1210 aa31.43■■■□□ 2.62
AC006001.3-204ENST00000638711 RUSC2Q8N2Y8 1516 aa31.4■■■□□ 2.62
AC006001.3-204ENST00000638711 TOP2BQ02880 1626 aa31.39■■■□□ 2.62
AC006001.3-204ENST00000638711 CSRNP3Q8WYN3 585 aa31.38■■■□□ 2.61
AC006001.3-204ENST00000638711 PCGF6Q9BYE7 350 aa31.33■■■□□ 2.61
AC006001.3-204ENST00000638711 BIVM-ERCC5R4GMW8 1640 aa31.33■■■□□ 2.61
AC006001.3-204ENST00000638711 CADPSQ9ULU8 1353 aa31.25■■■□□ 2.59
AC006001.3-204ENST00000638711 TNIKQ9UKE5 1360 aa31.23■■■□□ 2.59
AC006001.3-204ENST00000638711 PRDM2Q13029 1718 aa31.2■■■□□ 2.58
AC006001.3-204ENST00000638711 CUX1P39880 1505 aa31.2■■■□□ 2.58
AC006001.3-204ENST00000638711 GOLGA3Q08378 1498 aa31.19■■■□□ 2.58
AC006001.3-204ENST00000638711 TRIM26Q12899 539 aaPredicted RBP31.18■■■□□ 2.58
AC006001.3-204ENST00000638711 CEP164Q9UPV0 1460 aa31.13■■■□□ 2.57
AC006001.3-204ENST00000638711 KIF21BO75037 1637 aa31.13■■■□□ 2.57
AC006001.3-204ENST00000638711 CEP162Q5TB80 1403 aa31.1■■■□□ 2.57
AC006001.3-204ENST00000638711 HRCP23327 699 aa31.1■■■□□ 2.57
AC006001.3-204ENST00000638711 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
AC006001.3-204ENST00000638711 FANCD2Q9BXW9 1451 aa30.9■■■□□ 2.54
AC006001.3-204ENST00000638711 RAPGEF2Q9Y4G8 1499 aa30.89■■■□□ 2.53
AC006001.3-204ENST00000638711 KIF27Q86VH2 1401 aa30.88■■■□□ 2.53
AC006001.3-204ENST00000638711 PRXQ9BXM0 1461 aa30.85■■■□□ 2.53
AC006001.3-204ENST00000638711 ERICH3Q5RHP9 1530 aa30.83■■■□□ 2.53
AC006001.3-204ENST00000638711 LAMC3Q9Y6N6 1575 aa30.78■■■□□ 2.52
AC006001.3-204ENST00000638711 NESP48681 1621 aa30.78■■■□□ 2.52
AC006001.3-204ENST00000638711 FGD5Q6ZNL6 1462 aa30.76■■■□□ 2.51
AC006001.3-204ENST00000638711 CLIP1P30622 1438 aa30.72■■■□□ 2.51
AC006001.3-204ENST00000638711 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
AC006001.3-204ENST00000638711 CUX2O14529 1486 aa30.68■■■□□ 2.5
AC006001.3-204ENST00000638711 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
AC006001.3-204ENST00000638711 PPARGC1BQ86YN6 1023 aaKnown RBP30.61■■■□□ 2.49
AC006001.3-204ENST00000638711 DNAJC5BQ9UF47 199 aa30.61■■■□□ 2.49
AC006001.3-204ENST00000638711 IGF1RP08069 1367 aa30.58■■■□□ 2.49
AC006001.3-204ENST00000638711 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
AC006001.3-204ENST00000638711 VPS8Q8N3P4 1428 aa30.54■■■□□ 2.48
AC006001.3-204ENST00000638711 POLA1P09884 1462 aaPredicted RBP30.53■■■□□ 2.48
AC006001.3-204ENST00000638711 ABCA10Q8WWZ4 1543 aa30.51■■■□□ 2.47
AC006001.3-204ENST00000638711 URB2Q14146 1524 aaKnown RBP30.49■■■□□ 2.47
AC006001.3-204ENST00000638711 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
AC006001.3-204ENST00000638711 CARMIL1Q5VZK9 1371 aa30.42■■■□□ 2.46
AC006001.3-204ENST00000638711 ARAP1Q96P48 1450 aa30.36■■■□□ 2.45
AC006001.3-204ENST00000638711 KIF21AQ7Z4S6 1674 aa30.32■■■□□ 2.44
AC006001.3-204ENST00000638711 RANGAP1P46060 587 aaPredicted RBP30.32■■■□□ 2.44
AC006001.3-204ENST00000638711 ZEB1P37275 1124 aaPredicted RBP30.31■■■□□ 2.44
AC006001.3-204ENST00000638711 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
AC006001.3-204ENST00000638711 TTBK1Q5TCY1 1321 aaPredicted RBP30.25■■■□□ 2.43
AC006001.3-204ENST00000638711 ARHGAP35Q9NRY4 1499 aa30.24■■■□□ 2.43
AC006001.3-204ENST00000638711 CUL7Q14999 1698 aa30.21■■■□□ 2.43
AC006001.3-204ENST00000638711 APLP2Q06481 763 aa30.2■■■□□ 2.42
AC006001.3-204ENST00000638711 ABCA5Q8WWZ7 1642 aa30.18■■■□□ 2.42
AC006001.3-204ENST00000638711 MRC2Q9UBG0 1479 aa30.15■■■□□ 2.42
AC006001.3-204ENST00000638711 GAPVD1Q14C86 1478 aa30.1■■■□□ 2.41
AC006001.3-204ENST00000638711 TDRD9Q8NDG6 1382 aaKnown RBP30.1■■■□□ 2.41
AC006001.3-204ENST00000638711 TARBP1Q13395 1621 aaKnown RBP30.1■■■□□ 2.41
AC006001.3-204ENST00000638711 WDR62O43379 1518 aa29.96■■■□□ 2.39
AC006001.3-204ENST00000638711 EFCAB5A4FU69 1503 aa29.93■■■□□ 2.38
AC006001.3-204ENST00000638711 CTTNBP2Q8WZ74 1663 aa29.91■■■□□ 2.38
AC006001.3-204ENST00000638711 MAP3K1Q13233 1512 aa29.89■■■□□ 2.38
AC006001.3-204ENST00000638711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.89■■■□□ 2.38
AC006001.3-204ENST00000638711 FHAD1B1AJZ9 1412 aa29.89■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms