Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CAPZA2-204ENST00000426421 1214 ntTSL 54.28□□□□□ -1.724e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-210ENST00000466023 626 ntTSL 34.11□□□□□ -1.754e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-203ENST00000417431 517 ntTSL 33.97□□□□□ -1.774e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-208ENST00000464669 898 ntTSL 23.93□□□□□ -1.784e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-205ENST00000449080 814 ntTSL 53.74□□□□□ -1.814e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-207ENST00000464223 164 ntTSL 1 (best)3.74□□□□□ -1.814e-15■■■■■ 48.6
XRN2Q9H0D6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.493e-7■■■■■ 48.6
XRN2Q9H0D6 ZNF580-204ENST00000590190 335 ntTSL 322.86■■□□□ 1.253e-7■■■■■ 48.6
XRN2Q9H0D6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.44e-11■■■■■ 48.6
XRN2Q9H0D6 SUN1-222ENST00000457861 2975 ntTSL 215.28■□□□□ 0.044e-11■■■■■ 48.6
XRN2Q9H0D6 MBD6-212ENST00000552163 570 ntTSL 325.41■■□□□ 1.664e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.38■■□□□ 1.334e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-208ENST00000566401 522 ntTSL 323.38■■□□□ 1.334e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-205ENST00000565110 575 ntTSL 522.87■■□□□ 1.254e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-206ENST00000565479 865 ntTSL 522.68■■□□□ 1.224e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-210ENST00000568674 371 ntTSL 222.68■■□□□ 1.224e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.124e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.064e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.54■■□□□ 1.044e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.944e-12■■■■■ 48.5
XRN2Q9H0D6 MBD6-204ENST00000547545 1884 ntTSL 1 (best)19.18■□□□□ 0.664e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.38■□□□□ 0.534e-12■■■■■ 48.5
XRN2Q9H0D6 YPEL3-211ENST00000568681 1739 ntTSL 217.81■□□□□ 0.444e-12■■■■■ 48.5
XRN2Q9H0D6 MBD6-206ENST00000548550 563 ntTSL 417.62■□□□□ 0.414e-12■■■■■ 48.5
XRN2Q9H0D6 TNXB-205ENST00000486148 2669 ntTSL 1 (best)17.35■□□□□ 0.374e-12■■■■■ 48.5
XRN2Q9H0D6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.26■□□□□ 0.354e-12■■■■■ 48.5
XRN2Q9H0D6 ATF6B-216ENST00000494022 320 ntTSL 215.05■□□□□ -04e-12■■■■■ 48.5
XRN2Q9H0D6 TNXB-202ENST00000442721 372 ntTSL 1 (best)14.7□□□□□ -0.064e-12■■■■■ 48.5
XRN2Q9H0D6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.074e-12■■■■■ 48.5
XRN2Q9H0D6 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.724e-12■■■■■ 48.5
XRN2Q9H0D6 FNDC3B-206ENST00000443501 678 ntTSL 310.37□□□□□ -0.754e-12■■■■■ 48.5
XRN2Q9H0D6 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.014e-12■■■■■ 48.5
XRN2Q9H0D6 FNDC3B-209ENST00000478016 554 ntTSL 43.71□□□□□ -1.824e-12■■■■■ 48.5
XRN2Q9H0D6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.71■□□□□ 0.755e-7■■■■■ 48.4
XRN2Q9H0D6 ANO7-204ENST00000451047 555 ntTSL 326.3■■□□□ 1.85e-13■■■■■ 47.9
XRN2Q9H0D6 ANO7-208ENST00000481071 1905 ntTSL 519.67■□□□□ 0.745e-13■■■■■ 47.9
XRN2Q9H0D6 ANO7-209ENST00000487192 2196 ntTSL 1 (best)18.15■□□□□ 0.55e-13■■■■■ 47.9
XRN2Q9H0D6 ANO7-205ENST00000459928 2139 ntTSL 1 (best)17.44■□□□□ 0.385e-13■■■■■ 47.9
XRN2Q9H0D6 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.385e-13■■■■■ 47.9
XRN2Q9H0D6 ANO7-201ENST00000274979 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.765e-13■■■■■ 47.9
XRN2Q9H0D6 MVD-212ENST00000565842 285 ntTSL 328.97■■■□□ 2.231e-8■■■■■ 47.8
XRN2Q9H0D6 MVD-204ENST00000562741 217 ntTSL 226■■□□□ 1.751e-8■■■■■ 47.8
XRN2Q9H0D6 MIER3-201ENST00000336942 601 ntTSL 59.45□□□□□ -0.96e-8■■■■■ 47.8
XRN2Q9H0D6 MIER3-209ENST00000480115 394 ntTSL 56.71□□□□□ -1.346e-8■■■■■ 47.8
XRN2Q9H0D6 MIER3-211ENST00000546593 244 ntTSL 55.62□□□□□ -1.516e-8■■■■■ 47.8
XRN2Q9H0D6 MIER3-210ENST00000497185 108 ntTSL 54.22□□□□□ -1.736e-8■■■■■ 47.8
XRN2Q9H0D6 MIER3-208ENST00000452157 5240 ntTSL 1 (best)3.49□□□□□ -1.856e-8■■■■■ 47.8
XRN2Q9H0D6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.936e-8■■■■■ 47.8
XRN2Q9H0D6 MIER3-206ENST00000440000 219 ntTSL 52.4□□□□□ -2.036e-8■■■■■ 47.8
XRN2Q9H0D6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.076e-8■■■■■ 47.8
XRN2Q9H0D6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.086e-8■■■■■ 47.8
XRN2Q9H0D6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.77■■■□□ 2.525e-7■■■■■ 47.8
XRN2Q9H0D6 R3HDM4-205ENST00000589445 705 ntTSL 325.68■■□□□ 1.75e-7■■■■■ 47.8
XRN2Q9H0D6 R3HDM4-206ENST00000590454 1006 ntTSL 325.5■■□□□ 1.675e-7■■■■■ 47.8
XRN2Q9H0D6 GNAS-233ENST00000476935 828 ntTSL 328.32■■■□□ 2.123e-7■■■■■ 47.6
XRN2Q9H0D6 GNAS-248ENST00000488652 953 ntTSL 525.38■■□□□ 1.653e-7■■■■■ 47.6
XRN2Q9H0D6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.48■■□□□ 1.672e-6■■■■■ 47.3
XRN2Q9H0D6 DNMT3A-204ENST00000380756 4477 ntTSL 1 (best)12.67□□□□□ -0.382e-6■■■■■ 47.3
XRN2Q9H0D6 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.572e-6■■■■■ 47.3
XRN2Q9H0D6 MVD-210ENST00000565610 507 ntTSL 323.53■■□□□ 1.366e-7■■■■■ 47.2
XRN2Q9H0D6 GRHL1-204ENST00000464418 2099 ntTSL 214.26□□□□□ -0.138e-15■■■■■ 47
XRN2Q9H0D6 GRHL1-208ENST00000497403 5400 ntTSL 211.97□□□□□ -0.498e-15■■■■■ 47
XRN2Q9H0D6 GRHL1-205ENST00000472167 2060 ntTSL 1 (best)10.1□□□□□ -0.798e-15■■■■■ 47
XRN2Q9H0D6 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.088e-15■■■■■ 47
XRN2Q9H0D6 GRHL1-203ENST00000439493 564 ntTSL 57.59□□□□□ -1.198e-15■■■■■ 47
XRN2Q9H0D6 GALNT2-203ENST00000488903 593 ntTSL 230.71■■■□□ 2.513e-8■■■■■ 46.9
XRN2Q9H0D6 FRMD8-209ENST00000533782 677 ntTSL 529.06■■■□□ 2.243e-8■■■■■ 46.9
XRN2Q9H0D6 FRMD8-205ENST00000526201 568 ntTSL 527.09■■□□□ 1.933e-8■■■■■ 46.9
XRN2Q9H0D6 PKD1-240ENST00000570253 603 ntTSL 525.82■■□□□ 1.723e-8■■■■■ 46.9
XRN2Q9H0D6 ST6GAL1-214ENST00000455441 596 ntTSL 424.45■■□□□ 1.53e-8■■■■■ 46.9
XRN2Q9H0D6 DTNA-217ENST00000590412 604 ntTSL 324.42■■□□□ 1.53e-8■■■■■ 46.9
XRN2Q9H0D6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.25■■□□□ 1.473e-8■■■■■ 46.9
XRN2Q9H0D6 ST6GAL1-205ENST00000427315 544 ntTSL 424.23■■□□□ 1.473e-8■■■■■ 46.9
XRN2Q9H0D6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.21■■□□□ 1.473e-8■■■■■ 46.9
XRN2Q9H0D6 ST6GAL1-222ENST00000487031 592 ntTSL 423.71■■□□□ 1.393e-8■■■■■ 46.9
XRN2Q9H0D6 ST6GAL1-217ENST00000463542 516 ntTSL 423.39■■□□□ 1.333e-8■■■■■ 46.9
XRN2Q9H0D6 CBX8-203ENST00000427800 665 ntTSL 222.83■■□□□ 1.253e-8■■■■■ 46.9
XRN2Q9H0D6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.233e-8■■■■■ 46.9
XRN2Q9H0D6 CBX8-204ENST00000485449 581 ntTSL 322.54■■□□□ 1.23e-8■■■■■ 46.9
XRN2Q9H0D6 EML1-208ENST00000554479 1277 ntTSL 1 (best)22.54■■□□□ 1.23e-8■■■■■ 46.9
XRN2Q9H0D6 PKD1-232ENST00000566905 559 ntTSL 322.36■■□□□ 1.173e-8■■■■■ 46.9
XRN2Q9H0D6 PKD1-217ENST00000483814 563 ntTSL 222.36■■□□□ 1.173e-8■■■■■ 46.9
XRN2Q9H0D6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.25■■□□□ 1.153e-8■■■■■ 46.9
XRN2Q9H0D6 SCAMP3-209ENST00000497470 845 ntTSL 522.19■■□□□ 1.143e-8■■■■■ 46.9
XRN2Q9H0D6 C21orf2-206ENST00000478674 485 ntTSL 321.48■■□□□ 1.033e-8■■■■■ 46.9
XRN2Q9H0D6 PKD1-206ENST00000469851 661 ntTSL 521.27■■□□□ 13e-8■■■■■ 46.9
XRN2Q9H0D6 SCAMP3-204ENST00000465312 715 ntTSL 521.23■□□□□ 0.993e-8■■■■■ 46.9
XRN2Q9H0D6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.993e-8■■■■■ 46.9
XRN2Q9H0D6 KAT6A-205ENST00000426524 588 ntTSL 221.21■□□□□ 0.993e-8■■■■■ 46.9
XRN2Q9H0D6 SEMA6C-201ENST00000341697 5262 ntTSL 1 (best)20.17■□□□□ 0.823e-8■■■■■ 46.9
XRN2Q9H0D6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.14■□□□□ 0.813e-8■■■■■ 46.9
XRN2Q9H0D6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.98■□□□□ 0.793e-8■■■■■ 46.9
XRN2Q9H0D6 CBX8-202ENST00000413392 777 ntTSL 319.9■□□□□ 0.783e-8■■■■■ 46.9
XRN2Q9H0D6 UNKL-209ENST00000503648 742 ntTSL 319.79■□□□□ 0.763e-8■■■■■ 46.9
XRN2Q9H0D6 SCAMP3-208ENST00000490999 1011 ntTSL 219.15■□□□□ 0.663e-8■■■■■ 46.9
XRN2Q9H0D6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.652e-13■■■■■ 46.9
XRN2Q9H0D6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.623e-8■■■■■ 46.9
XRN2Q9H0D6 FURIN-203ENST00000559353 587 ntTSL 318.94■□□□□ 0.623e-8■■■■■ 46.9
XRN2Q9H0D6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.63e-8■■■■■ 46.9
XRN2Q9H0D6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.54■□□□□ 0.563e-8■■■■■ 46.9
Retrieved 100 of 21,068 protein–RNA pairs in 58.6 ms