RNA–Protein interactions for RNA: ENST00000483814.1

PKD1-217, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-217ENST00000483814 NISCHQ9Y2I1 1504 aa46.43■■■■■ 5.02
PKD1-217ENST00000483814 CCDC180Q9P1Z9 1646 aa41.35■■■■■ 4.21
PKD1-217ENST00000483814 ABCC9O60706 1549 aa40.58■■■■■ 4.09
PKD1-217ENST00000483814 RB1CC1Q8TDY2 1594 aa38.96■■■■□ 3.83
PKD1-217ENST00000483814 DCAF8L2P0C7V8 631 aa38.92■■■■□ 3.82
PKD1-217ENST00000483814 NACADO15069 1562 aa38.87■■■■□ 3.81
PKD1-217ENST00000483814 ZCCHC6Q5VYS8 1495 aaKnown RBP38.65■■■■□ 3.78
PKD1-217ENST00000483814 MYO15BQ96JP2 1530 aa38.53■■■■□ 3.76
PKD1-217ENST00000483814 DCAF1Q9Y4B6 1507 aa38.35■■■■□ 3.73
PKD1-217ENST00000483814 UNC13AQ9UPW8 1703 aa38.18■■■■□ 3.7
PKD1-217ENST00000483814 PABPN1Q86U42 306 aaKnown RBP eCLIP37.9■■■■□ 3.66
PKD1-217ENST00000483814 BICRAQ9NZM4 1560 aa37.78■■■■□ 3.64
PKD1-217ENST00000483814 SCRIBQ14160 1630 aa37.78■■■■□ 3.64
PKD1-217ENST00000483814 SHROOM4Q9ULL8 1493 aa37.29■■■■□ 3.56
PKD1-217ENST00000483814 DNAJC5BQ9UF47 199 aa37.29■■■■□ 3.56
PKD1-217ENST00000483814 EIF4G1Q04637 1599 aaKnown RBP36.8■■■■□ 3.48
PKD1-217ENST00000483814 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
PKD1-217ENST00000483814 CECR2Q9BXF3 1484 aa36.44■■■■□ 3.42
PKD1-217ENST00000483814 SMARCA4P51532 1647 aa36.08■■■■□ 3.37
PKD1-217ENST00000483814 BAZ1AQ9NRL2 1556 aaPredicted RBP36■■■■□ 3.35
PKD1-217ENST00000483814 ATAD2BQ9ULI0 1458 aa35.87■■■■□ 3.33
PKD1-217ENST00000483814 SMARCA2P51531 1590 aa35.83■■■■□ 3.33
PKD1-217ENST00000483814 NCAPD3P42695 1498 aa35.82■■■■□ 3.32
PKD1-217ENST00000483814 MROH2BQ7Z745 1585 aa35.81■■■■□ 3.32
PKD1-217ENST00000483814 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
PKD1-217ENST00000483814 PEG3Q9GZU2 1588 aa35.67■■■■□ 3.3
PKD1-217ENST00000483814 BAZ1BQ9UIG0 1483 aaKnown RBP35.6■■■■□ 3.29
PKD1-217ENST00000483814 WIZO95785 1651 aa35.46■■■■□ 3.27
PKD1-217ENST00000483814 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.25
PKD1-217ENST00000483814 NESP48681 1621 aa35.09■■■■□ 3.21
PKD1-217ENST00000483814 TOP2AP11388 1531 aaKnown RBP35.02■■■■□ 3.2
PKD1-217ENST00000483814 ERCC6Q03468 1493 aa34.99■■■■□ 3.19
PKD1-217ENST00000483814 LAMC3Q9Y6N6 1575 aa34.95■■■■□ 3.18
PKD1-217ENST00000483814 CADPSQ9ULU8 1353 aa34.8■■■■□ 3.16
PKD1-217ENST00000483814 KIF21AQ7Z4S6 1674 aa34.73■■■■□ 3.15
PKD1-217ENST00000483814 PDS5BQ9NTI5 1447 aa34.7■■■■□ 3.15
PKD1-217ENST00000483814 CCDC88BA6NC98 1476 aa34.61■■■■□ 3.13
PKD1-217ENST00000483814 CUX2O14529 1486 aa34.58■■■■□ 3.13
PKD1-217ENST00000483814 CFTRP13569 1480 aa34.57■■■■□ 3.12
PKD1-217ENST00000483814 THOC2Q8NI27 1593 aaKnown RBP34.57■■■■□ 3.12
PKD1-217ENST00000483814 SUPT5HO00267 1087 aaKnown RBP34.45■■■■□ 3.11
PKD1-217ENST00000483814 FANCD2Q9BXW9 1451 aa34.44■■■■□ 3.1
PKD1-217ENST00000483814 PRDM2Q13029 1718 aa34.42■■■■□ 3.1
PKD1-217ENST00000483814 CEP164Q9UPV0 1460 aa34.41■■■■□ 3.1
PKD1-217ENST00000483814 MRC2Q9UBG0 1479 aa34.37■■■■□ 3.09
PKD1-217ENST00000483814 WDR62O43379 1518 aa34.25■■■■□ 3.07
PKD1-217ENST00000483814 URB2Q14146 1524 aaKnown RBP34.1■■■■□ 3.05
PKD1-217ENST00000483814 TOPBP1Q92547 1522 aa33.88■■■■□ 3.01
PKD1-217ENST00000483814 DNMBPQ6XZF7 1577 aa33.84■■■■□ 3.01
PKD1-217ENST00000483814 ABCC8Q09428 1581 aa33.83■■■■□ 3.01
PKD1-217ENST00000483814 IFT140Q96RY7 1462 aa33.66■■■□□ 2.98
PKD1-217ENST00000483814 DNAJC5Q9H3Z4 198 aa33.63■■■□□ 2.97
PKD1-217ENST00000483814 CUX1P39880 1505 aa33.59■■■□□ 2.97
PKD1-217ENST00000483814 POLA1P09884 1462 aaPredicted RBP33.58■■■□□ 2.97
PKD1-217ENST00000483814 ZNF608Q9ULD9 1512 aaPredicted RBP33.56■■■□□ 2.96
PKD1-217ENST00000483814 TARBP1Q13395 1621 aaKnown RBP33.52■■■□□ 2.96
PKD1-217ENST00000483814 FGD5Q6ZNL6 1462 aa33.5■■■□□ 2.95
PKD1-217ENST00000483814 RAD54L2Q9Y4B4 1467 aa33.46■■■□□ 2.95
PKD1-217ENST00000483814 EIF4G3O43432 1585 aaKnown RBP33.45■■■□□ 2.95
PKD1-217ENST00000483814 SOGA1O94964 1423 aa33.44■■■□□ 2.94
PKD1-217ENST00000483814 AQRO60306 1485 aaKnown RBP eCLIP33.36■■■□□ 2.93
PKD1-217ENST00000483814 WRNQ14191 1432 aaPredicted RBP eCLIP33.33■■■□□ 2.93
PKD1-217ENST00000483814 SYNJ1O43426 1573 aa33.3■■■□□ 2.92
PKD1-217ENST00000483814 BIVM-ERCC5R4GMW8 1640 aa33.29■■■□□ 2.92
PKD1-217ENST00000483814 TDRD9Q8NDG6 1382 aaKnown RBP33.28■■■□□ 2.92
PKD1-217ENST00000483814 TOP2BQ02880 1626 aa33.28■■■□□ 2.92
PKD1-217ENST00000483814 WDR97A6NE52 1622 aa33.25■■■□□ 2.91
PKD1-217ENST00000483814 OSCARQ8IYS5 282 aa33.15■■■□□ 2.9
PKD1-217ENST00000483814 ABCA10Q8WWZ4 1543 aa33.13■■■□□ 2.89
PKD1-217ENST00000483814 CHD1O14646 1710 aa33.1■■■□□ 2.89
PKD1-217ENST00000483814 PBRM1Q86U86 1689 aa33.07■■■□□ 2.89
PKD1-217ENST00000483814 GRIN2BQ13224 1484 aa33.05■■■□□ 2.88
PKD1-217ENST00000483814 GAPVD1Q14C86 1478 aa33.05■■■□□ 2.88
PKD1-217ENST00000483814 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
PKD1-217ENST00000483814 ABCA5Q8WWZ7 1642 aa33.05■■■□□ 2.88
PKD1-217ENST00000483814 FBLN2P98095 1184 aa33.02■■■□□ 2.88
PKD1-217ENST00000483814 MAGI1Q96QZ7 1491 aaPredicted RBP32.97■■■□□ 2.87
PKD1-217ENST00000483814 CHMP7Q8WUX9 453 aaPredicted RBP32.87■■■□□ 2.85
PKD1-217ENST00000483814 SYNJ2O15056 1496 aa32.85■■■□□ 2.85
PKD1-217ENST00000483814 ERICH3Q5RHP9 1530 aa32.75■■■□□ 2.83
PKD1-217ENST00000483814 ADAMTS12P58397 1594 aa32.75■■■□□ 2.83
PKD1-217ENST00000483814 RIMBP3CA6NJZ7 1639 aa32.69■■■□□ 2.82
PKD1-217ENST00000483814 RIMBP3BA6NNM3 1639 aa32.69■■■□□ 2.82
PKD1-217ENST00000483814 RIMBP3Q9UFD9 1639 aa32.69■■■□□ 2.82
PKD1-217ENST00000483814 FHAD1B1AJZ9 1412 aa32.65■■■□□ 2.82
PKD1-217ENST00000483814 ARHGEF11O15085 1522 aa32.64■■■□□ 2.82
PKD1-217ENST00000483814 GRIN2AQ12879 1464 aa32.64■■■□□ 2.82
PKD1-217ENST00000483814 CLASP1Q7Z460 1538 aa32.64■■■□□ 2.82
PKD1-217ENST00000483814 KIF27Q86VH2 1401 aa32.63■■■□□ 2.81
PKD1-217ENST00000483814 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
PKD1-217ENST00000483814 CEP170Q5SW79 1584 aa32.5■■■□□ 2.79
PKD1-217ENST00000483814 IGF1RP08069 1367 aa32.49■■■□□ 2.79
PKD1-217ENST00000483814 CUL7Q14999 1698 aa32.47■■■□□ 2.79
PKD1-217ENST00000483814 NUP160Q12769 1436 aa32.46■■■□□ 2.79
PKD1-217ENST00000483814 ARAP1Q96P48 1450 aa32.37■■■□□ 2.77
PKD1-217ENST00000483814 CYB5RLQ6IPT4 315 aa32.36■■■□□ 2.77
PKD1-217ENST00000483814 RUSC2Q8N2Y8 1516 aa32.36■■■□□ 2.77
PKD1-217ENST00000483814 CARMIL1Q5VZK9 1371 aa32.32■■■□□ 2.76
PKD1-217ENST00000483814 SHROOM2Q13796 1616 aa32.26■■■□□ 2.76
PKD1-217ENST00000483814 ERCC6L2Q5T890 1561 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms