RNA–Protein interactions for RNA: ENST00000398838.8

YPEL3-201, Transcript of yippee like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YPEL3, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL3-201ENST00000398838 NISCHQ9Y2I1 1504 aa45.67■■■■■ 4.9
YPEL3-201ENST00000398838 CCDC180Q9P1Z9 1646 aa40.82■■■■■ 4.12
YPEL3-201ENST00000398838 ABCC9O60706 1549 aa40.11■■■■■ 4.01
YPEL3-201ENST00000398838 RB1CC1Q8TDY2 1594 aa38.55■■■■□ 3.76
YPEL3-201ENST00000398838 NACADO15069 1562 aa38.45■■■■□ 3.75
YPEL3-201ENST00000398838 DCAF8L2P0C7V8 631 aa38.2■■■■□ 3.71
YPEL3-201ENST00000398838 MYO15BQ96JP2 1530 aa38.17■■■■□ 3.7
YPEL3-201ENST00000398838 ZCCHC6Q5VYS8 1495 aaKnown RBP37.95■■■■□ 3.67
YPEL3-201ENST00000398838 DCAF1Q9Y4B6 1507 aa37.86■■■■□ 3.65
YPEL3-201ENST00000398838 UNC13AQ9UPW8 1703 aa37.67■■■■□ 3.62
YPEL3-201ENST00000398838 PABPN1Q86U42 306 aaKnown RBP eCLIP37.4■■■■□ 3.58
YPEL3-201ENST00000398838 BICRAQ9NZM4 1560 aa37.36■■■■□ 3.57
YPEL3-201ENST00000398838 DNAJC5BQ9UF47 199 aa37.13■■■■□ 3.53
YPEL3-201ENST00000398838 SCRIBQ14160 1630 aa37.07■■■■□ 3.52
YPEL3-201ENST00000398838 SHROOM4Q9ULL8 1493 aa37.05■■■■□ 3.52
YPEL3-201ENST00000398838 EIF4G1Q04637 1599 aaKnown RBP36.4■■■■□ 3.42
YPEL3-201ENST00000398838 CC2D2AQ9P2K1 1620 aa36.33■■■■□ 3.41
YPEL3-201ENST00000398838 CECR2Q9BXF3 1484 aa36.12■■■■□ 3.37
YPEL3-201ENST00000398838 SMARCA4P51532 1647 aa35.5■■■■□ 3.27
YPEL3-201ENST00000398838 NCAPD3P42695 1498 aa35.48■■■■□ 3.27
YPEL3-201ENST00000398838 BAZ1AQ9NRL2 1556 aaPredicted RBP35.43■■■■□ 3.26
YPEL3-201ENST00000398838 ATAD2BQ9ULI0 1458 aa35.39■■■■□ 3.26
YPEL3-201ENST00000398838 SMARCA2P51531 1590 aa35.38■■■■□ 3.25
YPEL3-201ENST00000398838 HMGXB3Q12766 1538 aa35.26■■■■□ 3.23
YPEL3-201ENST00000398838 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
YPEL3-201ENST00000398838 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
YPEL3-201ENST00000398838 BAZ1BQ9UIG0 1483 aaKnown RBP35.07■■■■□ 3.2
YPEL3-201ENST00000398838 WIZO95785 1651 aa34.76■■■■□ 3.15
YPEL3-201ENST00000398838 RSF1Q96T23 1441 aaPredicted RBP34.64■■■■□ 3.14
YPEL3-201ENST00000398838 ERCC6Q03468 1493 aa34.63■■■■□ 3.13
YPEL3-201ENST00000398838 NESP48681 1621 aa34.6■■■■□ 3.13
YPEL3-201ENST00000398838 LAMC3Q9Y6N6 1575 aa34.59■■■■□ 3.13
YPEL3-201ENST00000398838 CUX2O14529 1486 aa34.46■■■■□ 3.11
YPEL3-201ENST00000398838 CADPSQ9ULU8 1353 aa34.39■■■■□ 3.1
YPEL3-201ENST00000398838 TOP2AP11388 1531 aaKnown RBP34.39■■■■□ 3.1
YPEL3-201ENST00000398838 PDS5BQ9NTI5 1447 aa34.36■■■■□ 3.09
YPEL3-201ENST00000398838 KIF21AQ7Z4S6 1674 aa34.25■■■■□ 3.07
YPEL3-201ENST00000398838 THOC2Q8NI27 1593 aaKnown RBP34.21■■■■□ 3.07
YPEL3-201ENST00000398838 CFTRP13569 1480 aa34.13■■■■□ 3.05
YPEL3-201ENST00000398838 CCDC88BA6NC98 1476 aa33.98■■■■□ 3.03
YPEL3-201ENST00000398838 MRC2Q9UBG0 1479 aa33.98■■■■□ 3.03
YPEL3-201ENST00000398838 FANCD2Q9BXW9 1451 aa33.96■■■■□ 3.03
YPEL3-201ENST00000398838 CEP164Q9UPV0 1460 aa33.95■■■■□ 3.03
YPEL3-201ENST00000398838 PRDM2Q13029 1718 aa33.9■■■■□ 3.02
YPEL3-201ENST00000398838 WDR62O43379 1518 aa33.89■■■■□ 3.02
YPEL3-201ENST00000398838 DNAJC5Q9H3Z4 198 aa33.8■■■■□ 3
YPEL3-201ENST00000398838 URB2Q14146 1524 aaKnown RBP33.63■■■□□ 2.97
YPEL3-201ENST00000398838 ABCC8Q09428 1581 aa33.47■■■□□ 2.95
YPEL3-201ENST00000398838 SUPT5HO00267 1087 aaKnown RBP33.43■■■□□ 2.94
YPEL3-201ENST00000398838 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
YPEL3-201ENST00000398838 DNMBPQ6XZF7 1577 aa33.34■■■□□ 2.93
YPEL3-201ENST00000398838 IFT140Q96RY7 1462 aa33.29■■■□□ 2.92
YPEL3-201ENST00000398838 ZNF608Q9ULD9 1512 aaPredicted RBP33.09■■■□□ 2.89
YPEL3-201ENST00000398838 TARBP1Q13395 1621 aaKnown RBP33.08■■■□□ 2.89
YPEL3-201ENST00000398838 POLA1P09884 1462 aaPredicted RBP33.07■■■□□ 2.88
YPEL3-201ENST00000398838 CUX1P39880 1505 aa32.99■■■□□ 2.87
YPEL3-201ENST00000398838 EIF4G3O43432 1585 aaKnown RBP32.97■■■□□ 2.87
YPEL3-201ENST00000398838 OSCARQ8IYS5 282 aa32.97■■■□□ 2.87
YPEL3-201ENST00000398838 SOGA1O94964 1423 aa32.95■■■□□ 2.87
YPEL3-201ENST00000398838 FGD5Q6ZNL6 1462 aa32.93■■■□□ 2.86
YPEL3-201ENST00000398838 RAD54L2Q9Y4B4 1467 aa32.89■■■□□ 2.86
YPEL3-201ENST00000398838 WDR97A6NE52 1622 aa32.88■■■□□ 2.85
YPEL3-201ENST00000398838 AQRO60306 1485 aaKnown RBP eCLIP32.88■■■□□ 2.856e-9■■■■□ 26.1
YPEL3-201ENST00000398838 TDRD9Q8NDG6 1382 aaKnown RBP32.76■■■□□ 2.83
YPEL3-201ENST00000398838 BIVM-ERCC5R4GMW8 1640 aa32.68■■■□□ 2.82
YPEL3-201ENST00000398838 TOP2BQ02880 1626 aa32.67■■■□□ 2.82
YPEL3-201ENST00000398838 WRNQ14191 1432 aaPredicted RBP eCLIP32.67■■■□□ 2.82
YPEL3-201ENST00000398838 ABCA10Q8WWZ4 1543 aa32.65■■■□□ 2.82
YPEL3-201ENST00000398838 CHD1O14646 1710 aa32.65■■■□□ 2.82
YPEL3-201ENST00000398838 GRIN2BQ13224 1484 aa32.61■■■□□ 2.81
YPEL3-201ENST00000398838 MAGI1Q96QZ7 1491 aaPredicted RBP32.59■■■□□ 2.81
YPEL3-201ENST00000398838 SYNJ1O43426 1573 aa32.58■■■□□ 2.81
YPEL3-201ENST00000398838 GAPVD1Q14C86 1478 aa32.56■■■□□ 2.8
YPEL3-201ENST00000398838 SNAPC4Q5SXM2 1469 aa32.55■■■□□ 2.8
YPEL3-201ENST00000398838 FBLN2P98095 1184 aa32.54■■■□□ 2.8
YPEL3-201ENST00000398838 ABCA5Q8WWZ7 1642 aa32.53■■■□□ 2.8
YPEL3-201ENST00000398838 PBRM1Q86U86 1689 aa32.53■■■□□ 2.8
YPEL3-201ENST00000398838 CHMP7Q8WUX9 453 aaPredicted RBP32.46■■■□□ 2.79
YPEL3-201ENST00000398838 SYNJ2O15056 1496 aa32.45■■■□□ 2.79
YPEL3-201ENST00000398838 RIMBP3CA6NJZ7 1639 aa32.44■■■□□ 2.78
YPEL3-201ENST00000398838 RIMBP3BA6NNM3 1639 aa32.44■■■□□ 2.78
YPEL3-201ENST00000398838 RIMBP3Q9UFD9 1639 aa32.44■■■□□ 2.78
YPEL3-201ENST00000398838 TRIM41Q8WV44 630 aa32.41■■■□□ 2.78
YPEL3-201ENST00000398838 ARHGEF11O15085 1522 aa32.38■■■□□ 2.77
YPEL3-201ENST00000398838 CLASP1Q7Z460 1538 aa32.3■■■□□ 2.76
YPEL3-201ENST00000398838 ERICH3Q5RHP9 1530 aa32.27■■■□□ 2.76
YPEL3-201ENST00000398838 ADAMTS12P58397 1594 aa32.21■■■□□ 2.75
YPEL3-201ENST00000398838 FHAD1B1AJZ9 1412 aa32.19■■■□□ 2.74
YPEL3-201ENST00000398838 GRIN2AQ12879 1464 aa32.17■■■□□ 2.74
YPEL3-201ENST00000398838 CYB5RLQ6IPT4 315 aa32.09■■■□□ 2.73
YPEL3-201ENST00000398838 ARAP1Q96P48 1450 aa32.08■■■□□ 2.73
YPEL3-201ENST00000398838 NUP160Q12769 1436 aa32.07■■■□□ 2.72
YPEL3-201ENST00000398838 KIF27Q86VH2 1401 aa32.04■■■□□ 2.72
YPEL3-201ENST00000398838 CEP170Q5SW79 1584 aa32.01■■■□□ 2.71
YPEL3-201ENST00000398838 IGF1RP08069 1367 aa31.95■■■□□ 2.71
YPEL3-201ENST00000398838 CUL7Q14999 1698 aa31.92■■■□□ 2.7
YPEL3-201ENST00000398838 SHROOM2Q13796 1616 aa31.89■■■□□ 2.7
YPEL3-201ENST00000398838 JPH4Q96JJ6 628 aa31.75■■■□□ 2.67
YPEL3-201ENST00000398838 CARMIL1Q5VZK9 1371 aa31.75■■■□□ 2.67
YPEL3-201ENST00000398838 ERCC6L2Q5T890 1561 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms