RNA–Protein interactions for RNA: ENST00000548550.1

MBD6-206, Transcript of methyl-CpG binding domain protein 6, humanhuman

TSL 4

Gene MBD6, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD6-206ENST00000548550 NISCHQ9Y2I1 1504 aa37.1■■■■□ 3.53
MBD6-206ENST00000548550 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
MBD6-206ENST00000548550 ABCC9O60706 1549 aa31.74■■■□□ 2.67
MBD6-206ENST00000548550 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
MBD6-206ENST00000548550 ZCCHC6Q5VYS8 1495 aaKnown RBP30.99■■■□□ 2.55
MBD6-206ENST00000548550 NACADO15069 1562 aa30.93■■■□□ 2.54
MBD6-206ENST00000548550 DCAF1Q9Y4B6 1507 aa30.89■■■□□ 2.54
MBD6-206ENST00000548550 RB1CC1Q8TDY2 1594 aa30.84■■■□□ 2.53
MBD6-206ENST00000548550 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
MBD6-206ENST00000548550 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
MBD6-206ENST00000548550 BICRAQ9NZM4 1560 aa29.89■■■□□ 2.38
MBD6-206ENST00000548550 SHROOM4Q9ULL8 1493 aa29.85■■■□□ 2.37
MBD6-206ENST00000548550 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
MBD6-206ENST00000548550 PABPN1Q86U42 306 aaKnown RBP eCLIP29.6■■■□□ 2.33
MBD6-206ENST00000548550 EIF4G1Q04637 1599 aaKnown RBP29.07■■■□□ 2.24
MBD6-206ENST00000548550 DNAJC5BQ9UF47 199 aa28.88■■■□□ 2.21
MBD6-206ENST00000548550 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
MBD6-206ENST00000548550 BAZ1AQ9NRL2 1556 aaPredicted RBP28.76■■■□□ 2.19
MBD6-206ENST00000548550 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
MBD6-206ENST00000548550 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
MBD6-206ENST00000548550 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
MBD6-206ENST00000548550 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
MBD6-206ENST00000548550 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
MBD6-206ENST00000548550 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
MBD6-206ENST00000548550 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
MBD6-206ENST00000548550 HMGXB3Q12766 1538 aa28.44■■■□□ 2.14
MBD6-206ENST00000548550 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
MBD6-206ENST00000548550 BAZ1BQ9UIG0 1483 aaKnown RBP28.24■■■□□ 2.11
MBD6-206ENST00000548550 WIZO95785 1651 aa28.16■■■□□ 2.1
MBD6-206ENST00000548550 TOP2AP11388 1531 aaKnown RBP28.01■■■□□ 2.07
MBD6-206ENST00000548550 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
MBD6-206ENST00000548550 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
MBD6-206ENST00000548550 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
MBD6-206ENST00000548550 CFTRP13569 1480 aa27.57■■■□□ 2
MBD6-206ENST00000548550 NESP48681 1621 aa27.54■■■□□ 2
MBD6-206ENST00000548550 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
MBD6-206ENST00000548550 SUPT5HO00267 1087 aaKnown RBP27.45■■□□□ 1.98
MBD6-206ENST00000548550 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
MBD6-206ENST00000548550 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
MBD6-206ENST00000548550 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
MBD6-206ENST00000548550 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
MBD6-206ENST00000548550 THOC2Q8NI27 1593 aaKnown RBP27.24■■□□□ 1.95
MBD6-206ENST00000548550 CEP164Q9UPV0 1460 aa27.23■■□□□ 1.95
MBD6-206ENST00000548550 CUX2O14529 1486 aa27.19■■□□□ 1.94
MBD6-206ENST00000548550 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
MBD6-206ENST00000548550 WDR62O43379 1518 aa27.13■■□□□ 1.93
MBD6-206ENST00000548550 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
MBD6-206ENST00000548550 URB2Q14146 1524 aaKnown RBP26.98■■□□□ 1.91
MBD6-206ENST00000548550 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
MBD6-206ENST00000548550 TOPBP1Q92547 1522 aa26.88■■□□□ 1.89
MBD6-206ENST00000548550 CUX1P39880 1505 aa26.74■■□□□ 1.87
MBD6-206ENST00000548550 IFT140Q96RY7 1462 aa26.7■■□□□ 1.87
MBD6-206ENST00000548550 POLA1P09884 1462 aaPredicted RBP26.67■■□□□ 1.86
MBD6-206ENST00000548550 WRNQ14191 1432 aaPredicted RBP eCLIP26.66■■□□□ 1.86
MBD6-206ENST00000548550 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
MBD6-206ENST00000548550 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
MBD6-206ENST00000548550 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
MBD6-206ENST00000548550 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
MBD6-206ENST00000548550 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
MBD6-206ENST00000548550 SYNJ1O43426 1573 aa26.56■■□□□ 1.84
MBD6-206ENST00000548550 SOGA1O94964 1423 aa26.51■■□□□ 1.83
MBD6-206ENST00000548550 ABCA10Q8WWZ4 1543 aa26.46■■□□□ 1.83
MBD6-206ENST00000548550 RAD54L2Q9Y4B4 1467 aa26.43■■□□□ 1.82
MBD6-206ENST00000548550 ZNF608Q9ULD9 1512 aaPredicted RBP26.43■■□□□ 1.82
MBD6-206ENST00000548550 EIF4G3O43432 1585 aaKnown RBP26.41■■□□□ 1.82
MBD6-206ENST00000548550 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
MBD6-206ENST00000548550 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.8
MBD6-206ENST00000548550 TDRD9Q8NDG6 1382 aaKnown RBP26.25■■□□□ 1.79
MBD6-206ENST00000548550 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
MBD6-206ENST00000548550 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
MBD6-206ENST00000548550 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
MBD6-206ENST00000548550 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
MBD6-206ENST00000548550 ERICH3Q5RHP9 1530 aa26.17■■□□□ 1.78
MBD6-206ENST00000548550 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
MBD6-206ENST00000548550 SNAPC4Q5SXM2 1469 aa26.11■■□□□ 1.77
MBD6-206ENST00000548550 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
MBD6-206ENST00000548550 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
MBD6-206ENST00000548550 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
MBD6-206ENST00000548550 FHAD1B1AJZ9 1412 aa25.99■■□□□ 1.75
MBD6-206ENST00000548550 CHD1O14646 1710 aa25.99■■□□□ 1.75
MBD6-206ENST00000548550 CUL7Q14999 1698 aa25.96■■□□□ 1.75
MBD6-206ENST00000548550 IGF1RP08069 1367 aa25.95■■□□□ 1.75
MBD6-206ENST00000548550 OSCARQ8IYS5 282 aa25.95■■□□□ 1.74
MBD6-206ENST00000548550 DNAJC5Q9H3Z4 198 aa25.95■■□□□ 1.74
MBD6-206ENST00000548550 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
MBD6-206ENST00000548550 GRIN2AQ12879 1464 aa25.9■■□□□ 1.74
MBD6-206ENST00000548550 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
MBD6-206ENST00000548550 EEA1Q15075 1411 aa25.87■■□□□ 1.73
MBD6-206ENST00000548550 NUP160Q12769 1436 aa25.83■■□□□ 1.73
MBD6-206ENST00000548550 CLASP1Q7Z460 1538 aa25.83■■□□□ 1.72
MBD6-206ENST00000548550 RUSC2Q8N2Y8 1516 aa25.79■■□□□ 1.72
MBD6-206ENST00000548550 CARMIL1Q5VZK9 1371 aa25.78■■□□□ 1.72
MBD6-206ENST00000548550 FBLN2P98095 1184 aa25.77■■□□□ 1.72
MBD6-206ENST00000548550 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
MBD6-206ENST00000548550 PRXQ9BXM0 1461 aa25.72■■□□□ 1.71
MBD6-206ENST00000548550 RAPGEF2Q9Y4G8 1499 aa25.7■■□□□ 1.7
MBD6-206ENST00000548550 SHROOM2Q13796 1616 aa25.63■■□□□ 1.69
MBD6-206ENST00000548550 CSRNP3Q8WYN3 585 aa25.62■■□□□ 1.69
MBD6-206ENST00000548550 KIAA0586Q9BVV6 1533 aa25.62■■□□□ 1.69
MBD6-206ENST00000548550 ARHGEF11O15085 1522 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms