RNA–Protein interactions for RNA: ENST00000469851.1

PKD1-206, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 661 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-206ENST00000469851 NISCHQ9Y2I1 1504 aa43.99■■■■■ 4.63
PKD1-206ENST00000469851 CCDC180Q9P1Z9 1646 aa39.47■■■■□ 3.91
PKD1-206ENST00000469851 ABCC9O60706 1549 aa39.14■■■■□ 3.86
PKD1-206ENST00000469851 RB1CC1Q8TDY2 1594 aa37.43■■■■□ 3.58
PKD1-206ENST00000469851 NACADO15069 1562 aa37.24■■■■□ 3.55
PKD1-206ENST00000469851 DCAF8L2P0C7V8 631 aa36.88■■■■□ 3.49
PKD1-206ENST00000469851 MYO15BQ96JP2 1530 aa36.84■■■■□ 3.49
PKD1-206ENST00000469851 UNC13AQ9UPW8 1703 aa36.63■■■■□ 3.45
PKD1-206ENST00000469851 DNAJC5BQ9UF47 199 aa36.53■■■■□ 3.44
PKD1-206ENST00000469851 ZCCHC6Q5VYS8 1495 aaKnown RBP36.51■■■■□ 3.44
PKD1-206ENST00000469851 PABPN1Q86U42 306 aaKnown RBP eCLIP36.42■■■■□ 3.42
PKD1-206ENST00000469851 DCAF1Q9Y4B6 1507 aa36.41■■■■□ 3.42
PKD1-206ENST00000469851 BICRAQ9NZM4 1560 aa36.33■■■■□ 3.41
PKD1-206ENST00000469851 SHROOM4Q9ULL8 1493 aa35.93■■■■□ 3.34
PKD1-206ENST00000469851 SCRIBQ14160 1630 aa35.88■■■■□ 3.33
PKD1-206ENST00000469851 CC2D2AQ9P2K1 1620 aa35.43■■■■□ 3.26
PKD1-206ENST00000469851 EIF4G1Q04637 1599 aaKnown RBP35.42■■■■□ 3.26
PKD1-206ENST00000469851 CECR2Q9BXF3 1484 aa35.27■■■■□ 3.24
PKD1-206ENST00000469851 NCAPD3P42695 1498 aa34.35■■■■□ 3.09
PKD1-206ENST00000469851 SMARCA4P51532 1647 aa34.3■■■■□ 3.08
PKD1-206ENST00000469851 ATAD2BQ9ULI0 1458 aa34.25■■■■□ 3.07
PKD1-206ENST00000469851 SMARCA2P51531 1590 aa34.2■■■■□ 3.07
PKD1-206ENST00000469851 BAZ1AQ9NRL2 1556 aaPredicted RBP34.15■■■■□ 3.06
PKD1-206ENST00000469851 HMGXB3Q12766 1538 aa34.14■■■■□ 3.06
PKD1-206ENST00000469851 PEG3Q9GZU2 1588 aa34.01■■■■□ 3.03
PKD1-206ENST00000469851 BAZ1BQ9UIG0 1483 aaKnown RBP33.93■■■■□ 3.02
PKD1-206ENST00000469851 MROH2BQ7Z745 1585 aa33.87■■■■□ 3.01
PKD1-206ENST00000469851 ERCC6Q03468 1493 aa33.79■■■■□ 3
PKD1-206ENST00000469851 CUX2O14529 1486 aa33.74■■■□□ 2.99
PKD1-206ENST00000469851 NESP48681 1621 aa33.69■■■□□ 2.98
PKD1-206ENST00000469851 LAMC3Q9Y6N6 1575 aa33.57■■■□□ 2.96
PKD1-206ENST00000469851 WIZO95785 1651 aa33.49■■■□□ 2.95
PKD1-206ENST00000469851 DNAJC5Q9H3Z4 198 aa33.44■■■□□ 2.94
PKD1-206ENST00000469851 THOC2Q8NI27 1593 aaKnown RBP33.39■■■□□ 2.94
PKD1-206ENST00000469851 KIF21AQ7Z4S6 1674 aa33.33■■■□□ 2.93
PKD1-206ENST00000469851 PDS5BQ9NTI5 1447 aa33.32■■■□□ 2.92
PKD1-206ENST00000469851 CADPSQ9ULU8 1353 aa33.28■■■□□ 2.92
PKD1-206ENST00000469851 RSF1Q96T23 1441 aaPredicted RBP33.24■■■□□ 2.91
PKD1-206ENST00000469851 TOP2AP11388 1531 aaKnown RBP33.11■■■□□ 2.89
PKD1-206ENST00000469851 MRC2Q9UBG0 1479 aa33.03■■■□□ 2.88
PKD1-206ENST00000469851 CFTRP13569 1480 aa32.98■■■□□ 2.87
PKD1-206ENST00000469851 WDR62O43379 1518 aa32.97■■■□□ 2.87
PKD1-206ENST00000469851 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
PKD1-206ENST00000469851 FANCD2Q9BXW9 1451 aa32.91■■■□□ 2.86
PKD1-206ENST00000469851 PRDM2Q13029 1718 aa32.75■■■□□ 2.83
PKD1-206ENST00000469851 CCDC88BA6NC98 1476 aa32.69■■■□□ 2.82
PKD1-206ENST00000469851 URB2Q14146 1524 aaKnown RBP32.63■■■□□ 2.81
PKD1-206ENST00000469851 TOPBP1Q92547 1522 aa32.32■■■□□ 2.76
PKD1-206ENST00000469851 ABCC8Q09428 1581 aa32.29■■■□□ 2.76
PKD1-206ENST00000469851 IFT140Q96RY7 1462 aa32.28■■■□□ 2.76
PKD1-206ENST00000469851 DNMBPQ6XZF7 1577 aa32.24■■■□□ 2.75
PKD1-206ENST00000469851 ZNF608Q9ULD9 1512 aaPredicted RBP32.17■■■□□ 2.74
PKD1-206ENST00000469851 OSCARQ8IYS5 282 aa32.15■■■□□ 2.74
PKD1-206ENST00000469851 EIF4G3O43432 1585 aaKnown RBP32.06■■■□□ 2.72
PKD1-206ENST00000469851 TARBP1Q13395 1621 aaKnown RBP32.05■■■□□ 2.72
PKD1-206ENST00000469851 POLA1P09884 1462 aaPredicted RBP31.99■■■□□ 2.71
PKD1-206ENST00000469851 TRIM41Q8WV44 630 aa31.97■■■□□ 2.71
PKD1-206ENST00000469851 AQRO60306 1485 aaKnown RBP eCLIP31.89■■■□□ 2.7
PKD1-206ENST00000469851 RAD54L2Q9Y4B4 1467 aa31.84■■■□□ 2.69
PKD1-206ENST00000469851 SOGA1O94964 1423 aa31.83■■■□□ 2.69
PKD1-206ENST00000469851 CUX1P39880 1505 aa31.82■■■□□ 2.68
PKD1-206ENST00000469851 FGD5Q6ZNL6 1462 aa31.81■■■□□ 2.68
PKD1-206ENST00000469851 WDR97A6NE52 1622 aa31.79■■■□□ 2.68
PKD1-206ENST00000469851 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
PKD1-206ENST00000469851 CHD1O14646 1710 aa31.79■■■□□ 2.68
PKD1-206ENST00000469851 RIMBP3CA6NJZ7 1639 aa31.78■■■□□ 2.68
PKD1-206ENST00000469851 RIMBP3BA6NNM3 1639 aa31.78■■■□□ 2.68
PKD1-206ENST00000469851 RIMBP3Q9UFD9 1639 aa31.78■■■□□ 2.68
PKD1-206ENST00000469851 TDRD9Q8NDG6 1382 aaKnown RBP31.7■■■□□ 2.67
PKD1-206ENST00000469851 ARHGEF11O15085 1522 aa31.68■■■□□ 2.66
PKD1-206ENST00000469851 SNAPC4Q5SXM2 1469 aa31.59■■■□□ 2.65
PKD1-206ENST00000469851 FBLN2P98095 1184 aa31.58■■■□□ 2.65
PKD1-206ENST00000469851 MAGI1Q96QZ7 1491 aaPredicted RBP31.56■■■□□ 2.64
PKD1-206ENST00000469851 GRIN2BQ13224 1484 aa31.55■■■□□ 2.64
PKD1-206ENST00000469851 PBRM1Q86U86 1689 aa31.5■■■□□ 2.63
PKD1-206ENST00000469851 ABCA10Q8WWZ4 1543 aa31.49■■■□□ 2.63
PKD1-206ENST00000469851 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
PKD1-206ENST00000469851 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
PKD1-206ENST00000469851 SYNJ2O15056 1496 aa31.44■■■□□ 2.62
PKD1-206ENST00000469851 CLASP1Q7Z460 1538 aa31.44■■■□□ 2.62
PKD1-206ENST00000469851 BIVM-ERCC5R4GMW8 1640 aa31.42■■■□□ 2.62
PKD1-206ENST00000469851 CHMP7Q8WUX9 453 aaPredicted RBP31.42■■■□□ 2.62
PKD1-206ENST00000469851 SYNJ1O43426 1573 aa31.42■■■□□ 2.62
PKD1-206ENST00000469851 TOP2BQ02880 1626 aa31.4■■■□□ 2.62
PKD1-206ENST00000469851 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.61
PKD1-206ENST00000469851 ARAP1Q96P48 1450 aa31.38■■■□□ 2.61
PKD1-206ENST00000469851 CYB5RLQ6IPT4 315 aa31.35■■■□□ 2.61
PKD1-206ENST00000469851 ADAMTS12P58397 1594 aa31.18■■■□□ 2.58
PKD1-206ENST00000469851 GRIN2AQ12879 1464 aa31.15■■■□□ 2.58
PKD1-206ENST00000469851 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
PKD1-206ENST00000469851 FHAD1B1AJZ9 1412 aa31.07■■■□□ 2.57
PKD1-206ENST00000469851 NUP160Q12769 1436 aa31.06■■■□□ 2.56
PKD1-206ENST00000469851 CEP170Q5SW79 1584 aa31.05■■■□□ 2.56
PKD1-206ENST00000469851 SHROOM2Q13796 1616 aa30.95■■■□□ 2.54
PKD1-206ENST00000469851 TRHP20396 242 aaPredicted RBP30.92■■■□□ 2.54
PKD1-206ENST00000469851 ERCC6L2Q5T890 1561 aa30.91■■■□□ 2.54
PKD1-206ENST00000469851 RUSC2Q8N2Y8 1516 aa30.75■■■□□ 2.51
PKD1-206ENST00000469851 KIF27Q86VH2 1401 aa30.74■■■□□ 2.51
PKD1-206ENST00000469851 CUL7Q14999 1698 aa30.72■■■□□ 2.51
PKD1-206ENST00000469851 IGF1RP08069 1367 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms