RNA–Protein interactions for RNA: ENST00000566401.1

YPEL3-208, Transcript of yippee like 3, humanhuman

TSL 3

Gene YPEL3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL3-208ENST00000566401 NISCHQ9Y2I1 1504 aa48.05■■■■■ 5.28
YPEL3-208ENST00000566401 ABCC9O60706 1549 aa43.15■■■■■ 4.5
YPEL3-208ENST00000566401 CCDC180Q9P1Z9 1646 aa43■■■■■ 4.47
YPEL3-208ENST00000566401 RB1CC1Q8TDY2 1594 aa40.97■■■■■ 4.15
YPEL3-208ENST00000566401 DCAF8L2P0C7V8 631 aa40.71■■■■■ 4.11
YPEL3-208ENST00000566401 NACADO15069 1562 aa40.7■■■■■ 4.11
YPEL3-208ENST00000566401 DNAJC5BQ9UF47 199 aa40.61■■■■■ 4.09
YPEL3-208ENST00000566401 PABPN1Q86U42 306 aaKnown RBP eCLIP40.27■■■■■ 4.04
YPEL3-208ENST00000566401 MYO15BQ96JP2 1530 aa40.12■■■■■ 4.01
YPEL3-208ENST00000566401 UNC13AQ9UPW8 1703 aa40.1■■■■■ 4.01
YPEL3-208ENST00000566401 BICRAQ9NZM4 1560 aa39.85■■■■□ 3.97
YPEL3-208ENST00000566401 ZCCHC6Q5VYS8 1495 aaKnown RBP39.79■■■■□ 3.96
YPEL3-208ENST00000566401 DCAF1Q9Y4B6 1507 aa39.63■■■■□ 3.93
YPEL3-208ENST00000566401 SCRIBQ14160 1630 aa39.28■■■■□ 3.88
YPEL3-208ENST00000566401 SHROOM4Q9ULL8 1493 aa39.17■■■■□ 3.86
YPEL3-208ENST00000566401 CC2D2AQ9P2K1 1620 aa38.93■■■■□ 3.82
YPEL3-208ENST00000566401 CECR2Q9BXF3 1484 aa38.84■■■■□ 3.81
YPEL3-208ENST00000566401 EIF4G1Q04637 1599 aaKnown RBP38.83■■■■□ 3.81
YPEL3-208ENST00000566401 NCAPD3P42695 1498 aa37.64■■■■□ 3.62
YPEL3-208ENST00000566401 ATAD2BQ9ULI0 1458 aa37.53■■■■□ 3.6
YPEL3-208ENST00000566401 SMARCA4P51532 1647 aa37.45■■■■□ 3.59
YPEL3-208ENST00000566401 SMARCA2P51531 1590 aa37.36■■■■□ 3.57
YPEL3-208ENST00000566401 HMGXB3Q12766 1538 aa37.28■■■■□ 3.56
YPEL3-208ENST00000566401 BAZ1AQ9NRL2 1556 aaPredicted RBP37.25■■■■□ 3.55
YPEL3-208ENST00000566401 DNAJC5Q9H3Z4 198 aa37.2■■■■□ 3.55
YPEL3-208ENST00000566401 ERCC6Q03468 1493 aa37.2■■■■□ 3.54
YPEL3-208ENST00000566401 BAZ1BQ9UIG0 1483 aaKnown RBP37.13■■■■□ 3.54
YPEL3-208ENST00000566401 NESP48681 1621 aa37.1■■■■□ 3.53
YPEL3-208ENST00000566401 CUX2O14529 1486 aa37.08■■■■□ 3.53
YPEL3-208ENST00000566401 MROH2BQ7Z745 1585 aa37.07■■■■□ 3.52
YPEL3-208ENST00000566401 PEG3Q9GZU2 1588 aa37.07■■■■□ 3.52
YPEL3-208ENST00000566401 LAMC3Q9Y6N6 1575 aa36.72■■■■□ 3.47
YPEL3-208ENST00000566401 WIZO95785 1651 aa36.61■■■■□ 3.45
YPEL3-208ENST00000566401 THOC2Q8NI27 1593 aaKnown RBP36.6■■■■□ 3.45
YPEL3-208ENST00000566401 PDS5BQ9NTI5 1447 aa36.55■■■■□ 3.44
YPEL3-208ENST00000566401 KIF21AQ7Z4S6 1674 aa36.54■■■■□ 3.44
YPEL3-208ENST00000566401 CADPSQ9ULU8 1353 aa36.51■■■■□ 3.43
YPEL3-208ENST00000566401 RSF1Q96T23 1441 aaPredicted RBP36.31■■■■□ 3.4
YPEL3-208ENST00000566401 MRC2Q9UBG0 1479 aa36.22■■■■□ 3.39
YPEL3-208ENST00000566401 WDR62O43379 1518 aa36.11■■■■□ 3.37
YPEL3-208ENST00000566401 TOP2AP11388 1531 aaKnown RBP36.08■■■■□ 3.37
YPEL3-208ENST00000566401 CFTRP13569 1480 aa36.07■■■■□ 3.37
YPEL3-208ENST00000566401 FANCD2Q9BXW9 1451 aa36.07■■■■□ 3.37
YPEL3-208ENST00000566401 CEP164Q9UPV0 1460 aa36.07■■■■□ 3.37
YPEL3-208ENST00000566401 URB2Q14146 1524 aaKnown RBP35.79■■■■□ 3.32
YPEL3-208ENST00000566401 CCDC88BA6NC98 1476 aa35.76■■■■□ 3.32
YPEL3-208ENST00000566401 PRDM2Q13029 1718 aa35.62■■■■□ 3.29
YPEL3-208ENST00000566401 TRIM41Q8WV44 630 aa35.58■■■■□ 3.29
YPEL3-208ENST00000566401 OSCARQ8IYS5 282 aa35.52■■■■□ 3.28
YPEL3-208ENST00000566401 TOPBP1Q92547 1522 aa35.4■■■■□ 3.26
YPEL3-208ENST00000566401 ZNF608Q9ULD9 1512 aaPredicted RBP35.38■■■■□ 3.25
YPEL3-208ENST00000566401 IFT140Q96RY7 1462 aa35.36■■■■□ 3.25
YPEL3-208ENST00000566401 ABCC8Q09428 1581 aa35.26■■■■□ 3.24
YPEL3-208ENST00000566401 DNMBPQ6XZF7 1577 aa35.22■■■■□ 3.23
YPEL3-208ENST00000566401 AQRO60306 1485 aaKnown RBP eCLIP35.09■■■■□ 3.216e-9■■■■□ 26.1
YPEL3-208ENST00000566401 EIF4G3O43432 1585 aaKnown RBP35.08■■■■□ 3.21
YPEL3-208ENST00000566401 TARBP1Q13395 1621 aaKnown RBP35.06■■■■□ 3.2
YPEL3-208ENST00000566401 POLA1P09884 1462 aaPredicted RBP35.03■■■■□ 3.2
YPEL3-208ENST00000566401 RIMBP3CA6NJZ7 1639 aa34.98■■■■□ 3.19
YPEL3-208ENST00000566401 RIMBP3BA6NNM3 1639 aa34.98■■■■□ 3.19
YPEL3-208ENST00000566401 RIMBP3Q9UFD9 1639 aa34.98■■■■□ 3.19
YPEL3-208ENST00000566401 RAD54L2Q9Y4B4 1467 aa34.97■■■■□ 3.19
YPEL3-208ENST00000566401 SOGA1O94964 1423 aa34.91■■■■□ 3.18
YPEL3-208ENST00000566401 TDRD9Q8NDG6 1382 aaKnown RBP34.88■■■■□ 3.17
YPEL3-208ENST00000566401 ARHGEF11O15085 1522 aa34.87■■■■□ 3.17
YPEL3-208ENST00000566401 FBLN2P98095 1184 aa34.87■■■■□ 3.17
YPEL3-208ENST00000566401 CHD1O14646 1710 aa34.86■■■■□ 3.17
YPEL3-208ENST00000566401 FGD5Q6ZNL6 1462 aa34.82■■■■□ 3.16
YPEL3-208ENST00000566401 SUPT5HO00267 1087 aaKnown RBP34.81■■■■□ 3.16
YPEL3-208ENST00000566401 CUX1P39880 1505 aa34.8■■■■□ 3.16
YPEL3-208ENST00000566401 CYB5RLQ6IPT4 315 aa34.73■■■■□ 3.15
YPEL3-208ENST00000566401 SNAPC4Q5SXM2 1469 aa34.65■■■■□ 3.14
YPEL3-208ENST00000566401 WDR97A6NE52 1622 aa34.6■■■■□ 3.13
YPEL3-208ENST00000566401 CHMP7Q8WUX9 453 aaPredicted RBP34.59■■■■□ 3.13
YPEL3-208ENST00000566401 GRIN2BQ13224 1484 aa34.56■■■■□ 3.12
YPEL3-208ENST00000566401 ARAP1Q96P48 1450 aa34.55■■■■□ 3.12
YPEL3-208ENST00000566401 MAGI1Q96QZ7 1491 aaPredicted RBP34.52■■■■□ 3.12
YPEL3-208ENST00000566401 GAPVD1Q14C86 1478 aa34.46■■■■□ 3.11
YPEL3-208ENST00000566401 CLASP1Q7Z460 1538 aa34.45■■■■□ 3.1
YPEL3-208ENST00000566401 SYNJ2O15056 1496 aa34.43■■■■□ 3.1
YPEL3-208ENST00000566401 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
YPEL3-208ENST00000566401 SYNJ1O43426 1573 aa34.4■■■■□ 3.1
YPEL3-208ENST00000566401 PBRM1Q86U86 1689 aa34.38■■■■□ 3.09
YPEL3-208ENST00000566401 ABCA5Q8WWZ7 1642 aa34.33■■■■□ 3.09
YPEL3-208ENST00000566401 TRHP20396 242 aaPredicted RBP34.31■■■■□ 3.08
YPEL3-208ENST00000566401 WRNQ14191 1432 aaPredicted RBP eCLIP34.29■■■■□ 3.08
YPEL3-208ENST00000566401 TOP2BQ02880 1626 aa34.2■■■■□ 3.07
YPEL3-208ENST00000566401 BIVM-ERCC5R4GMW8 1640 aa34.19■■■■□ 3.06
YPEL3-208ENST00000566401 GRIN2AQ12879 1464 aa34.11■■■■□ 3.05
YPEL3-208ENST00000566401 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
YPEL3-208ENST00000566401 FHAD1B1AJZ9 1412 aa34.01■■■■□ 3.03
YPEL3-208ENST00000566401 NUP160Q12769 1436 aa34■■■■□ 3.03
YPEL3-208ENST00000566401 CEP170Q5SW79 1584 aa34■■■■□ 3.03
YPEL3-208ENST00000566401 ERCC6L2Q5T890 1561 aa33.99■■■■□ 3.03
YPEL3-208ENST00000566401 ERICH3Q5RHP9 1530 aa33.94■■■■□ 3.02
YPEL3-208ENST00000566401 SHROOM2Q13796 1616 aa33.82■■■■□ 3.01
YPEL3-208ENST00000566401 JPH4Q96JJ6 628 aa33.75■■■□□ 2.99
YPEL3-208ENST00000566401 PRG4Q92954 1404 aaPredicted RBP33.71■■■□□ 2.99
YPEL3-208ENST00000566401 IGF1RP08069 1367 aa33.63■■■□□ 2.97
YPEL3-208ENST00000566401 RUSC2Q8N2Y8 1516 aa33.57■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms