RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 NISCHQ9Y2I1 1504 aa44.09■■■■■ 4.65
SCAMP3-204ENST00000465312 CCDC180Q9P1Z9 1646 aa39.07■■■■□ 3.85
SCAMP3-204ENST00000465312 ABCC9O60706 1549 aa38.03■■■■□ 3.68
SCAMP3-204ENST00000465312 DCAF8L2P0C7V8 631 aa36.97■■■■□ 3.51
SCAMP3-204ENST00000465312 ZCCHC6Q5VYS8 1495 aaKnown RBP36.79■■■■□ 3.48
SCAMP3-204ENST00000465312 RB1CC1Q8TDY2 1594 aa36.68■■■■□ 3.46
SCAMP3-204ENST00000465312 NACADO15069 1562 aa36.66■■■■□ 3.46
SCAMP3-204ENST00000465312 MYO15BQ96JP2 1530 aa36.43■■■■□ 3.42
SCAMP3-204ENST00000465312 DCAF1Q9Y4B6 1507 aa36.41■■■■□ 3.42
SCAMP3-204ENST00000465312 UNC13AQ9UPW8 1703 aa35.83■■■■□ 3.33
SCAMP3-204ENST00000465312 SCRIBQ14160 1630 aa35.81■■■■□ 3.32
SCAMP3-204ENST00000465312 PABPN1Q86U42 306 aaKnown RBP eCLIP35.6■■■■□ 3.29
SCAMP3-204ENST00000465312 BICRAQ9NZM4 1560 aa35.46■■■■□ 3.27
SCAMP3-204ENST00000465312 SHROOM4Q9ULL8 1493 aa35.24■■■■□ 3.23
SCAMP3-204ENST00000465312 EIF4G1Q04637 1599 aaKnown RBP34.57■■■■□ 3.12
SCAMP3-204ENST00000465312 DNAJC5BQ9UF47 199 aa34.48■■■■□ 3.11
SCAMP3-204ENST00000465312 CC2D2AQ9P2K1 1620 aa34.37■■■■□ 3.09
SCAMP3-204ENST00000465312 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
SCAMP3-204ENST00000465312 BAZ1AQ9NRL2 1556 aaPredicted RBP34.19■■■■□ 3.06
SCAMP3-204ENST00000465312 SMARCA4P51532 1647 aa34.19■■■■□ 3.06
SCAMP3-204ENST00000465312 MROH2BQ7Z745 1585 aa34.01■■■■□ 3.03
SCAMP3-204ENST00000465312 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
SCAMP3-204ENST00000465312 ATAD2BQ9ULI0 1458 aa33.88■■■■□ 3.01
SCAMP3-204ENST00000465312 NCAPD3P42695 1498 aa33.76■■■■□ 3
SCAMP3-204ENST00000465312 PEG3Q9GZU2 1588 aa33.74■■■□□ 2.99
SCAMP3-204ENST00000465312 RSF1Q96T23 1441 aaPredicted RBP33.71■■■□□ 2.99
SCAMP3-204ENST00000465312 WIZO95785 1651 aa33.71■■■□□ 2.99
SCAMP3-204ENST00000465312 BAZ1BQ9UIG0 1483 aaKnown RBP33.71■■■□□ 2.99
SCAMP3-204ENST00000465312 HMGXB3Q12766 1538 aa33.68■■■□□ 2.98
SCAMP3-204ENST00000465312 TOP2AP11388 1531 aaKnown RBP33.34■■■□□ 2.93
SCAMP3-204ENST00000465312 SUPT5HO00267 1087 aaKnown RBP33.32■■■□□ 2.92
SCAMP3-204ENST00000465312 NESP48681 1621 aa32.96■■■□□ 2.87
SCAMP3-204ENST00000465312 CCDC88BA6NC98 1476 aa32.93■■■□□ 2.86
SCAMP3-204ENST00000465312 LAMC3Q9Y6N6 1575 aa32.9■■■□□ 2.86
SCAMP3-204ENST00000465312 CADPSQ9ULU8 1353 aa32.85■■■□□ 2.85
SCAMP3-204ENST00000465312 ERCC6Q03468 1493 aa32.82■■■□□ 2.84
SCAMP3-204ENST00000465312 PDS5BQ9NTI5 1447 aa32.69■■■□□ 2.82
SCAMP3-204ENST00000465312 CFTRP13569 1480 aa32.69■■■□□ 2.82
SCAMP3-204ENST00000465312 KIF21AQ7Z4S6 1674 aa32.61■■■□□ 2.81
SCAMP3-204ENST00000465312 PRDM2Q13029 1718 aa32.57■■■□□ 2.8
SCAMP3-204ENST00000465312 FANCD2Q9BXW9 1451 aa32.53■■■□□ 2.8
SCAMP3-204ENST00000465312 CEP164Q9UPV0 1460 aa32.49■■■□□ 2.79
SCAMP3-204ENST00000465312 THOC2Q8NI27 1593 aaKnown RBP32.36■■■□□ 2.77
SCAMP3-204ENST00000465312 MRC2Q9UBG0 1479 aa32.35■■■□□ 2.77
SCAMP3-204ENST00000465312 CUX2O14529 1486 aa32.22■■■□□ 2.75
SCAMP3-204ENST00000465312 WDR62O43379 1518 aa32.18■■■□□ 2.74
SCAMP3-204ENST00000465312 URB2Q14146 1524 aaKnown RBP32.15■■■□□ 2.74
SCAMP3-204ENST00000465312 DNMBPQ6XZF7 1577 aa32.03■■■□□ 2.72
SCAMP3-204ENST00000465312 TOPBP1Q92547 1522 aa32.03■■■□□ 2.72
SCAMP3-204ENST00000465312 ABCC8Q09428 1581 aa32.02■■■□□ 2.72
SCAMP3-204ENST00000465312 CUX1P39880 1505 aa31.9■■■□□ 2.7
SCAMP3-204ENST00000465312 WRNQ14191 1432 aaPredicted RBP eCLIP31.85■■■□□ 2.69
SCAMP3-204ENST00000465312 POLA1P09884 1462 aaPredicted RBP31.78■■■□□ 2.68
SCAMP3-204ENST00000465312 FGD5Q6ZNL6 1462 aa31.78■■■□□ 2.68
SCAMP3-204ENST00000465312 IFT140Q96RY7 1462 aa31.75■■■□□ 2.67
SCAMP3-204ENST00000465312 SYNJ1O43426 1573 aa31.74■■■□□ 2.67
SCAMP3-204ENST00000465312 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
SCAMP3-204ENST00000465312 BIVM-ERCC5R4GMW8 1640 aa31.71■■■□□ 2.67
SCAMP3-204ENST00000465312 SOGA1O94964 1423 aa31.68■■■□□ 2.66
SCAMP3-204ENST00000465312 RAD54L2Q9Y4B4 1467 aa31.66■■■□□ 2.66
SCAMP3-204ENST00000465312 TARBP1Q13395 1621 aaKnown RBP31.61■■■□□ 2.65
SCAMP3-204ENST00000465312 ZNF608Q9ULD9 1512 aaPredicted RBP31.58■■■□□ 2.65
SCAMP3-204ENST00000465312 EIF4G3O43432 1585 aaKnown RBP31.51■■■□□ 2.63
SCAMP3-204ENST00000465312 TDRD9Q8NDG6 1382 aaKnown RBP31.47■■■□□ 2.63
SCAMP3-204ENST00000465312 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.63
SCAMP3-204ENST00000465312 WDR97A6NE52 1622 aa31.46■■■□□ 2.63
SCAMP3-204ENST00000465312 ABCA10Q8WWZ4 1543 aa31.43■■■□□ 2.62
SCAMP3-204ENST00000465312 TRIM41Q8WV44 630 aa31.41■■■□□ 2.62
SCAMP3-204ENST00000465312 GAPVD1Q14C86 1478 aa31.32■■■□□ 2.6
SCAMP3-204ENST00000465312 ABCA5Q8WWZ7 1642 aa31.29■■■□□ 2.6
SCAMP3-204ENST00000465312 PBRM1Q86U86 1689 aa31.28■■■□□ 2.6
SCAMP3-204ENST00000465312 GRIN2BQ13224 1484 aa31.26■■■□□ 2.59
SCAMP3-204ENST00000465312 SNAPC4Q5SXM2 1469 aa31.21■■■□□ 2.59
SCAMP3-204ENST00000465312 FBLN2P98095 1184 aa31.18■■■□□ 2.58
SCAMP3-204ENST00000465312 KIF27Q86VH2 1401 aa31.16■■■□□ 2.58
SCAMP3-204ENST00000465312 CHIC1Q5VXU3 224 aa31.13■■■□□ 2.57
SCAMP3-204ENST00000465312 MAGI1Q96QZ7 1491 aaPredicted RBP31.13■■■□□ 2.57
SCAMP3-204ENST00000465312 CHD1O14646 1710 aa31.07■■■□□ 2.56
SCAMP3-204ENST00000465312 ERICH3Q5RHP9 1530 aa31.07■■■□□ 2.56
SCAMP3-204ENST00000465312 CHMP7Q8WUX9 453 aaPredicted RBP31.06■■■□□ 2.56
SCAMP3-204ENST00000465312 SYNJ2O15056 1496 aa31.01■■■□□ 2.55
SCAMP3-204ENST00000465312 ADAMTS12P58397 1594 aa31■■■□□ 2.55
SCAMP3-204ENST00000465312 OSCARQ8IYS5 282 aa30.98■■■□□ 2.55
SCAMP3-204ENST00000465312 RUSC2Q8N2Y8 1516 aa30.96■■■□□ 2.55
SCAMP3-204ENST00000465312 FHAD1B1AJZ9 1412 aa30.95■■■□□ 2.54
SCAMP3-204ENST00000465312 IGF1RP08069 1367 aa30.92■■■□□ 2.54
SCAMP3-204ENST00000465312 CUL7Q14999 1698 aa30.9■■■□□ 2.54
SCAMP3-204ENST00000465312 GRIN2AQ12879 1464 aa30.86■■■□□ 2.53
SCAMP3-204ENST00000465312 FAM9AQ8IZU1 332 aaPredicted RBP30.83■■■□□ 2.53
SCAMP3-204ENST00000465312 DNAJC5Q9H3Z4 198 aa30.82■■■□□ 2.52
SCAMP3-204ENST00000465312 CARMIL1Q5VZK9 1371 aa30.81■■■□□ 2.52
SCAMP3-204ENST00000465312 EEA1Q15075 1411 aa30.76■■■□□ 2.51
SCAMP3-204ENST00000465312 CSRNP3Q8WYN3 585 aa30.69■■■□□ 2.5
SCAMP3-204ENST00000465312 CEP170Q5SW79 1584 aa30.69■■■□□ 2.5
SCAMP3-204ENST00000465312 RAPGEF2Q9Y4G8 1499 aa30.67■■■□□ 2.5
SCAMP3-204ENST00000465312 CLASP1Q7Z460 1538 aa30.64■■■□□ 2.5
SCAMP3-204ENST00000465312 NUP160Q12769 1436 aa30.64■■■□□ 2.49
SCAMP3-204ENST00000465312 PRXQ9BXM0 1461 aa30.56■■■□□ 2.48
SCAMP3-204ENST00000465312 EHMT2Q96KQ7 1210 aa30.5■■■□□ 2.47
SCAMP3-204ENST00000465312 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms