RNA–Protein interactions for RNA: ENST00000375244.7

TNXB-201, Transcript of tenascin XB, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNXB, Length 13,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-201ENST00000375244 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.45
TNXB-201ENST00000375244 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.37
TNXB-201ENST00000375244 SUPT5HO00267 1087 aaKnown RBP16.94■□□□□ 0.3
TNXB-201ENST00000375244 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
TNXB-201ENST00000375244 APLP2Q06481 763 aa16.62■□□□□ 0.25
TNXB-201ENST00000375244 ERICH6Q7L0X2 663 aa16.58■□□□□ 0.24
TNXB-201ENST00000375244 SHROOM4Q9ULL8 1493 aa16.53■□□□□ 0.24
TNXB-201ENST00000375244 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
TNXB-201ENST00000375244 FAM9AQ8IZU1 332 aaPredicted RBP16.37■□□□□ 0.21
TNXB-201ENST00000375244 CENPBP07199 599 aaPredicted RBP16.34■□□□□ 0.21
TNXB-201ENST00000375244 TTBK1Q5TCY1 1321 aaPredicted RBP16.22■□□□□ 0.19
TNXB-201ENST00000375244 MYT1Q01538 1121 aa16.2■□□□□ 0.18
TNXB-201ENST00000375244 PCGF6Q9BYE7 350 aa16.18■□□□□ 0.18
TNXB-201ENST00000375244 NISCHQ9Y2I1 1504 aa16.18■□□□□ 0.18
TNXB-201ENST00000375244 NEFLP07196 543 aa16.12■□□□□ 0.17
TNXB-201ENST00000375244 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
TNXB-201ENST00000375244 RANGAP1P46060 587 aaPredicted RBP15.94■□□□□ 0.14
TNXB-201ENST00000375244 ATP1B4Q9UN42 357 aaPredicted RBP15.89■□□□□ 0.13
TNXB-201ENST00000375244 DAXXQ9UER7 740 aaPredicted RBP15.86■□□□□ 0.13
TNXB-201ENST00000375244 YTHDC1Q96MU7 727 aaKnown RBP15.86■□□□□ 0.13
TNXB-201ENST00000375244 UBTFP17480 764 aaKnown RBP15.72■□□□□ 0.11
TNXB-201ENST00000375244 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
TNXB-201ENST00000375244 ZNF316A6NFI3 1004 aaPredicted RBP15.47■□□□□ 0.07
TNXB-201ENST00000375244 POLR3GLQ9BT43 218 aa15.47■□□□□ 0.07
TNXB-201ENST00000375244 RTL5Q5HYW3 569 aaPredicted RBP15.46■□□□□ 0.07
TNXB-201ENST00000375244 PPARGC1BQ86YN6 1023 aaKnown RBP15.38■□□□□ 0.05
TNXB-201ENST00000375244 MYT1LQ9UL68 1186 aa15.37■□□□□ 0.05
TNXB-201ENST00000375244 TRIM26Q12899 539 aaPredicted RBP15.34■□□□□ 0.05
TNXB-201ENST00000375244 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
TNXB-201ENST00000375244 ITGAEP38570 1179 aa15.29■□□□□ 0.04
TNXB-201ENST00000375244 HRCP23327 699 aa15.27■□□□□ 0.03
TNXB-201ENST00000375244 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.03
TNXB-201ENST00000375244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
TNXB-201ENST00000375244 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
TNXB-201ENST00000375244 CNGB1Q14028 1251 aaPredicted RBP15.24■□□□□ 0.03
TNXB-201ENST00000375244 CHIC1Q5VXU3 224 aa15.17■□□□□ 0.02
TNXB-201ENST00000375244 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
TNXB-201ENST00000375244 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
TNXB-201ENST00000375244 CDK11AQ9UQ88 783 aaPredicted RBP14.92□□□□□ -0.02
TNXB-201ENST00000375244 BCANQ96GW7 911 aa14.9□□□□□ -0.02
TNXB-201ENST00000375244 CANXP27824 592 aaKnown RBP14.86□□□□□ -0.03
TNXB-201ENST00000375244 ANP32CO43423 234 aa14.85□□□□□ -0.03
TNXB-201ENST00000375244 LOC105371045A0A1W2PR82 267 aa14.85□□□□□ -0.03
TNXB-201ENST00000375244 FAM50AQ14320 339 aaKnown RBP14.85□□□□□ -0.03
TNXB-201ENST00000375244 TRIM52Q96A61 297 aa14.81□□□□□ -0.04
TNXB-201ENST00000375244 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
TNXB-201ENST00000375244 SLC24A1O60721 1099 aa14.79□□□□□ -0.04
TNXB-201ENST00000375244 NEUROD1Q13562 356 aa14.79□□□□□ -0.04
TNXB-201ENST00000375244 ANP32AP39687 249 aaKnown RBP14.77□□□□□ -0.04
TNXB-201ENST00000375244 ANP32BQ92688 251 aaKnown RBP14.77□□□□□ -0.05
TNXB-201ENST00000375244 GTF3C3Q9Y5Q9 886 aa14.76□□□□□ -0.05
TNXB-201ENST00000375244 NEFMP07197 916 aa14.74□□□□□ -0.05
TNXB-201ENST00000375244 ZNF326Q5BKZ1 582 aaKnown RBP14.73□□□□□ -0.05
TNXB-201ENST00000375244 EIF5BO60841 1220 aaKnown RBP14.67□□□□□ -0.06
TNXB-201ENST00000375244 HSP90AA1P07900 732 aaKnown RBP14.67□□□□□ -0.06
TNXB-201ENST00000375244 NPM2Q86SE8 214 aaKnown RBP14.62□□□□□ -0.07
TNXB-201ENST00000375244 GLIPR1L2Q4G1C9 344 aa14.6□□□□□ -0.07
TNXB-201ENST00000375244 UPF2Q9HAU5 1272 aaKnown RBP14.53□□□□□ -0.08
TNXB-201ENST00000375244 ACIN1Q9UKV3 1341 aaKnown RBP14.44□□□□□ -0.1
TNXB-201ENST00000375244 NBR1Q14596 966 aa14.37□□□□□ -0.11
TNXB-201ENST00000375244 FBLN2P98095 1184 aa14.36□□□□□ -0.11
TNXB-201ENST00000375244 CDK11BP21127 795 aaKnown RBP14.35□□□□□ -0.11
TNXB-201ENST00000375244 ARXQ96QS3 562 aa14.34□□□□□ -0.11
TNXB-201ENST00000375244 FKBP8Q14318 412 aa14.33□□□□□ -0.12
TNXB-201ENST00000375244 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.33□□□□□ -0.12
TNXB-201ENST00000375244 ESF1Q9H501 851 aaKnown RBP14.3□□□□□ -0.12
TNXB-201ENST00000375244 CCDC136Q96JN2 1154 aa14.28□□□□□ -0.12
TNXB-201ENST00000375244 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
TNXB-201ENST00000375244 TONSLQ96HA7 1378 aa14.27□□□□□ -0.13
TNXB-201ENST00000375244 HNRNPUQ00839 825 aaKnown RBP eCLIP14.27□□□□□ -0.13
TNXB-201ENST00000375244 ZNF777Q9ULD5 760 aaPredicted RBP14.26□□□□□ -0.13
TNXB-201ENST00000375244 ARID3CA6NKF2 412 aa14.25□□□□□ -0.13
TNXB-201ENST00000375244 MYH16Q9H6N6 1097 aa14.24□□□□□ -0.13
TNXB-201ENST00000375244 FAM9BQ8IZU0 186 aa14.22□□□□□ -0.13
TNXB-201ENST00000375244 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
TNXB-201ENST00000375244 TNNT2P45379 298 aaPredicted RBP14.19□□□□□ -0.14
TNXB-201ENST00000375244 CHGAP10645 457 aaKnown RBP14.18□□□□□ -0.14
TNXB-201ENST00000375244 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
TNXB-201ENST00000375244 SALL2Q9Y467 1007 aaPredicted RBP14.16□□□□□ -0.14
TNXB-201ENST00000375244 BECN1Q14457 450 aa14.16□□□□□ -0.14
TNXB-201ENST00000375244 TMC1Q8TDI8 760 aa14.16□□□□□ -0.14
TNXB-201ENST00000375244 WDR43Q15061 677 aaKnown RBP eCLIP14.16□□□□□ -0.14
TNXB-201ENST00000375244 TRIM44Q96DX7 344 aaPredicted RBP14.15□□□□□ -0.14
TNXB-201ENST00000375244 ANP32EQ9BTT0 268 aa14.15□□□□□ -0.15
TNXB-201ENST00000375244 NCLP19338 710 aaKnown RBP14.14□□□□□ -0.15
TNXB-201ENST00000375244 GOLGA6L22H0YM25 854 aa14.13□□□□□ -0.15
TNXB-201ENST00000375244 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
TNXB-201ENST00000375244 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
TNXB-201ENST00000375244 DDX10Q13206 875 aaKnown RBP14.12□□□□□ -0.15
TNXB-201ENST00000375244 PTMAP06454 111 aaKnown RBP14.08□□□□□ -0.16
TNXB-201ENST00000375244 MRS2Q9HD23 443 aa14.06□□□□□ -0.16
TNXB-201ENST00000375244 A0A0G2JS52 829 aa14.06□□□□□ -0.16
TNXB-201ENST00000375244 ZRSR1Q15695 479 aaKnown RBP14.06□□□□□ -0.16
TNXB-201ENST00000375244 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
TNXB-201ENST00000375244 ABCC9O60706 1549 aa14.05□□□□□ -0.16
TNXB-201ENST00000375244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.01□□□□□ -0.17
TNXB-201ENST00000375244 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
TNXB-201ENST00000375244 DNTTIP2Q5QJE6 756 aaKnown RBP14.01□□□□□ -0.17
TNXB-201ENST00000375244 CASC1Q6TDU7 716 aa14□□□□□ -0.17
TNXB-201ENST00000375244 IRX6P78412 446 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms