RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
TNXB-202ENST00000442721 ABCC9O60706 1549 aa27.37■■□□□ 1.97
TNXB-202ENST00000442721 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
TNXB-202ENST00000442721 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
TNXB-202ENST00000442721 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
TNXB-202ENST00000442721 NACADO15069 1562 aa25.8■■□□□ 1.72
TNXB-202ENST00000442721 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
TNXB-202ENST00000442721 PABPN1Q86U42 306 aaKnown RBP eCLIP25.44■■□□□ 1.66
TNXB-202ENST00000442721 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
TNXB-202ENST00000442721 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
TNXB-202ENST00000442721 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
TNXB-202ENST00000442721 ZCCHC6Q5VYS8 1495 aaKnown RBP25.08■■□□□ 1.6
TNXB-202ENST00000442721 DCAF1Q9Y4B6 1507 aa25.04■■□□□ 1.6
TNXB-202ENST00000442721 SHROOM4Q9ULL8 1493 aa24.96■■□□□ 1.59
TNXB-202ENST00000442721 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
TNXB-202ENST00000442721 CC2D2AQ9P2K1 1620 aa24.74■■□□□ 1.55
TNXB-202ENST00000442721 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.54
TNXB-202ENST00000442721 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
TNXB-202ENST00000442721 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
TNXB-202ENST00000442721 NCAPD3P42695 1498 aa23.83■■□□□ 1.41
TNXB-202ENST00000442721 ATAD2BQ9ULI0 1458 aa23.72■■□□□ 1.39
TNXB-202ENST00000442721 CUX2O14529 1486 aa23.71■■□□□ 1.39
TNXB-202ENST00000442721 SMARCA4P51532 1647 aa23.65■■□□□ 1.38
TNXB-202ENST00000442721 HMGXB3Q12766 1538 aa23.64■■□□□ 1.38
TNXB-202ENST00000442721 SMARCA2P51531 1590 aa23.64■■□□□ 1.37
TNXB-202ENST00000442721 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
TNXB-202ENST00000442721 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
TNXB-202ENST00000442721 NESP48681 1621 aa23.48■■□□□ 1.35
TNXB-202ENST00000442721 PEG3Q9GZU2 1588 aa23.47■■□□□ 1.35
TNXB-202ENST00000442721 BAZ1BQ9UIG0 1483 aaKnown RBP23.46■■□□□ 1.35
TNXB-202ENST00000442721 MROH2BQ7Z745 1585 aa23.32■■□□□ 1.32
TNXB-202ENST00000442721 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
TNXB-202ENST00000442721 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
TNXB-202ENST00000442721 KIF21AQ7Z4S6 1674 aa23.18■■□□□ 1.3
TNXB-202ENST00000442721 PDS5BQ9NTI5 1447 aa23.16■■□□□ 1.3
TNXB-202ENST00000442721 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
TNXB-202ENST00000442721 WIZO95785 1651 aa23.01■■□□□ 1.27
TNXB-202ENST00000442721 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
TNXB-202ENST00000442721 WDR62O43379 1518 aa22.96■■□□□ 1.27
TNXB-202ENST00000442721 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
TNXB-202ENST00000442721 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
TNXB-202ENST00000442721 FANCD2Q9BXW9 1451 aa22.81■■□□□ 1.24
TNXB-202ENST00000442721 CFTRP13569 1480 aa22.8■■□□□ 1.24
TNXB-202ENST00000442721 RSF1Q96T23 1441 aaPredicted RBP22.78■■□□□ 1.24
TNXB-202ENST00000442721 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
TNXB-202ENST00000442721 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
TNXB-202ENST00000442721 TOP2AP11388 1531 aaKnown RBP22.73■■□□□ 1.23
TNXB-202ENST00000442721 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
TNXB-202ENST00000442721 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
TNXB-202ENST00000442721 OSCARQ8IYS5 282 aa22.55■■□□□ 1.2
TNXB-202ENST00000442721 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
TNXB-202ENST00000442721 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
TNXB-202ENST00000442721 ZNF608Q9ULD9 1512 aaPredicted RBP22.39■■□□□ 1.17
TNXB-202ENST00000442721 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
TNXB-202ENST00000442721 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
TNXB-202ENST00000442721 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
TNXB-202ENST00000442721 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
TNXB-202ENST00000442721 ABCC8Q09428 1581 aa22.3■■□□□ 1.16
TNXB-202ENST00000442721 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
TNXB-202ENST00000442721 EIF4G3O43432 1585 aaKnown RBP22.26■■□□□ 1.15
TNXB-202ENST00000442721 ARHGEF11O15085 1522 aa22.22■■□□□ 1.15
TNXB-202ENST00000442721 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
TNXB-202ENST00000442721 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.14
TNXB-202ENST00000442721 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
TNXB-202ENST00000442721 CHD1O14646 1710 aa22.12■■□□□ 1.13
TNXB-202ENST00000442721 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
TNXB-202ENST00000442721 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
TNXB-202ENST00000442721 CYB5RLQ6IPT4 315 aa22■■□□□ 1.11
TNXB-202ENST00000442721 SOGA1O94964 1423 aa21.99■■□□□ 1.11
TNXB-202ENST00000442721 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
TNXB-202ENST00000442721 TDRD9Q8NDG6 1382 aaKnown RBP21.98■■□□□ 1.11
TNXB-202ENST00000442721 FBLN2P98095 1184 aa21.96■■□□□ 1.11
TNXB-202ENST00000442721 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
TNXB-202ENST00000442721 SNAPC4Q5SXM2 1469 aa21.93■■□□□ 1.1
TNXB-202ENST00000442721 CUX1P39880 1505 aa21.92■■□□□ 1.1
TNXB-202ENST00000442721 CLASP1Q7Z460 1538 aa21.9■■□□□ 1.1
TNXB-202ENST00000442721 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
TNXB-202ENST00000442721 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
TNXB-202ENST00000442721 SYNJ1O43426 1573 aa21.82■■□□□ 1.08
TNXB-202ENST00000442721 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
TNXB-202ENST00000442721 SYNJ2O15056 1496 aa21.8■■□□□ 1.08
TNXB-202ENST00000442721 TRHP20396 242 aaPredicted RBP21.79■■□□□ 1.08
TNXB-202ENST00000442721 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
TNXB-202ENST00000442721 GAPVD1Q14C86 1478 aa21.74■■□□□ 1.07
TNXB-202ENST00000442721 ABCA10Q8WWZ4 1543 aa21.72■■□□□ 1.07
TNXB-202ENST00000442721 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
TNXB-202ENST00000442721 GRIN2AQ12879 1464 aa21.57■■□□□ 1.04
TNXB-202ENST00000442721 WRNQ14191 1432 aaPredicted RBP eCLIP21.56■■□□□ 1.04
TNXB-202ENST00000442721 ADAMTS12P58397 1594 aa21.55■■□□□ 1.04
TNXB-202ENST00000442721 NUP160Q12769 1436 aa21.54■■□□□ 1.04
TNXB-202ENST00000442721 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
TNXB-202ENST00000442721 BIVM-ERCC5R4GMW8 1640 aa21.53■■□□□ 1.04
TNXB-202ENST00000442721 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
TNXB-202ENST00000442721 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
TNXB-202ENST00000442721 CEP170Q5SW79 1584 aa21.51■■□□□ 1.03
TNXB-202ENST00000442721 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
TNXB-202ENST00000442721 SHROOM2Q13796 1616 aa21.46■■□□□ 1.03
TNXB-202ENST00000442721 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
TNXB-202ENST00000442721 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
TNXB-202ENST00000442721 JPH4Q96JJ6 628 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms