RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 NISCHQ9Y2I1 1504 aa35.34■■■■□ 3.25
SEMA6C-201ENST00000341697 DCAF8L2P0C7V8 631 aa35.21■■■■□ 3.23
SEMA6C-201ENST00000341697 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
SEMA6C-201ENST00000341697 SHROOM4Q9ULL8 1493 aa32.92■■■□□ 2.86
SEMA6C-201ENST00000341697 EHMT2Q96KQ7 1210 aa31.55■■■□□ 2.64
SEMA6C-201ENST00000341697 FAM9AQ8IZU1 332 aaPredicted RBP31.06■■■□□ 2.56
SEMA6C-201ENST00000341697 APLP2Q06481 763 aa31.04■■■□□ 2.56
SEMA6C-201ENST00000341697 TRIM41Q8WV44 630 aa30.8■■■□□ 2.52
SEMA6C-201ENST00000341697 ABCC9O60706 1549 aa30.48■■■□□ 2.47
SEMA6C-201ENST00000341697 RANGAP1P46060 587 aaPredicted RBP30.46■■■□□ 2.47
SEMA6C-201ENST00000341697 TTBK1Q5TCY1 1321 aaPredicted RBP30.38■■■□□ 2.45
SEMA6C-201ENST00000341697 UBTFP17480 764 aaKnown RBP30.3■■■□□ 2.44
SEMA6C-201ENST00000341697 ATP1B4Q9UN42 357 aaPredicted RBP30.18■■■□□ 2.42
SEMA6C-201ENST00000341697 PCGF6Q9BYE7 350 aa30.09■■■□□ 2.41
SEMA6C-201ENST00000341697 PABPN1Q86U42 306 aaKnown RBP eCLIP30.01■■■□□ 2.392e-6■■□□□ 14.4
SEMA6C-201ENST00000341697 CCER1Q8TC90 406 aaPredicted RBP29.63■■■□□ 2.33
SEMA6C-201ENST00000341697 CHIC1Q5VXU3 224 aa29.63■■■□□ 2.33
SEMA6C-201ENST00000341697 ZEB1P37275 1124 aaPredicted RBP29.55■■■□□ 2.32
SEMA6C-201ENST00000341697 PPARGC1BQ86YN6 1023 aaKnown RBP29.43■■■□□ 2.3
SEMA6C-201ENST00000341697 CCDC180Q9P1Z9 1646 aa29.35■■■□□ 2.29
SEMA6C-201ENST00000341697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.35■■■□□ 2.29
SEMA6C-201ENST00000341697 HNRNPUL2Q1KMD3 747 aaKnown RBP29.35■■■□□ 2.29
SEMA6C-201ENST00000341697 PELP1Q8IZL8 1130 aaKnown RBP29.35■■■□□ 2.29
SEMA6C-201ENST00000341697 LOC105371045A0A1W2PR82 267 aa29.34■■■□□ 2.29
SEMA6C-201ENST00000341697 ZCCHC6Q5VYS8 1495 aaKnown RBP29.27■■■□□ 2.28
SEMA6C-201ENST00000341697 TRIM26Q12899 539 aaPredicted RBP29.19■■■□□ 2.26
SEMA6C-201ENST00000341697 SCRIBQ14160 1630 aa29.1■■■□□ 2.25
SEMA6C-201ENST00000341697 MYT1LQ9UL68 1186 aa29.06■■■□□ 2.24
SEMA6C-201ENST00000341697 ITGAEP38570 1179 aa29.06■■■□□ 2.24
SEMA6C-201ENST00000341697 CENPBP07199 599 aaPredicted RBP28.84■■■□□ 2.21
SEMA6C-201ENST00000341697 RB1CC1Q8TDY2 1594 aa28.73■■■□□ 2.19
SEMA6C-201ENST00000341697 FBLN2P98095 1184 aa28.71■■■□□ 2.19
SEMA6C-201ENST00000341697 FAM50AQ14320 339 aaKnown RBP28.55■■■□□ 2.16
SEMA6C-201ENST00000341697 CSRNP3Q8WYN3 585 aa28.54■■■□□ 2.16
SEMA6C-201ENST00000341697 NACADO15069 1562 aa28.5■■■□□ 2.15
SEMA6C-201ENST00000341697 HRCP23327 699 aa28.4■■■□□ 2.14
SEMA6C-201ENST00000341697 POLR3GLQ9BT43 218 aa28.39■■■□□ 2.14
SEMA6C-201ENST00000341697 YTHDC1Q96MU7 727 aaKnown RBP28.39■■■□□ 2.14
SEMA6C-201ENST00000341697 NEFLP07196 543 aa28.32■■■□□ 2.12
SEMA6C-201ENST00000341697 P3H3Q8IVL6 736 aa28.3■■■□□ 2.12
SEMA6C-201ENST00000341697 TRIM52Q96A61 297 aa28.29■■■□□ 2.12
SEMA6C-201ENST00000341697 ARID3CA6NKF2 412 aa28.12■■■□□ 2.09
SEMA6C-201ENST00000341697 RSF1Q96T23 1441 aaPredicted RBP28.1■■■□□ 2.09
SEMA6C-201ENST00000341697 DCAF1Q9Y4B6 1507 aa28.08■■■□□ 2.09
SEMA6C-201ENST00000341697 CDK11AQ9UQ88 783 aaPredicted RBP28.05■■■□□ 2.08
SEMA6C-201ENST00000341697 NEUROD1Q13562 356 aa28■■■□□ 2.07
SEMA6C-201ENST00000341697 CNGB1Q14028 1251 aaPredicted RBP28■■■□□ 2.07
SEMA6C-201ENST00000341697 SLC4A1APQ9BWU0 796 aaKnown RBP27.96■■■□□ 2.07
SEMA6C-201ENST00000341697 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
SEMA6C-201ENST00000341697 ERICH6Q7L0X2 663 aa27.94■■■□□ 2.06
SEMA6C-201ENST00000341697 ZNF777Q9ULD5 760 aaPredicted RBP27.89■■■□□ 2.05
SEMA6C-201ENST00000341697 BAZ1AQ9NRL2 1556 aaPredicted RBP27.8■■■□□ 2.04
SEMA6C-201ENST00000341697 ZNF326Q5BKZ1 582 aaKnown RBP27.79■■■□□ 2.04
SEMA6C-201ENST00000341697 CHMP7Q8WUX9 453 aaPredicted RBP27.78■■■□□ 2.04
SEMA6C-201ENST00000341697 NPM1P06748 294 aaKnown RBP eCLIP27.77■■■□□ 2.04
SEMA6C-201ENST00000341697 DIEXFQ68CQ4 756 aaKnown RBP27.73■■■□□ 2.03
SEMA6C-201ENST00000341697 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
SEMA6C-201ENST00000341697 WRNQ14191 1432 aaPredicted RBP eCLIP27.66■■■□□ 2.02
SEMA6C-201ENST00000341697 EEA1Q15075 1411 aa27.6■■■□□ 2.01
SEMA6C-201ENST00000341697 CLIP1P30622 1438 aa27.51■■□□□ 1.99
SEMA6C-201ENST00000341697 ESF1Q9H501 851 aaKnown RBP27.48■■□□□ 1.99
SEMA6C-201ENST00000341697 BCANQ96GW7 911 aa27.47■■□□□ 1.99
SEMA6C-201ENST00000341697 KIF27Q86VH2 1401 aa27.47■■□□□ 1.99
SEMA6C-201ENST00000341697 ERCC6Q03468 1493 aa27.46■■□□□ 1.99
SEMA6C-201ENST00000341697 MTUS2Q5JR59 1369 aa27.45■■□□□ 1.99
SEMA6C-201ENST00000341697 GOLGA3Q08378 1498 aa27.44■■□□□ 1.98
SEMA6C-201ENST00000341697 ANP32CO43423 234 aa27.43■■□□□ 1.98
SEMA6C-201ENST00000341697 MYO15BQ96JP2 1530 aa27.39■■□□□ 1.98
SEMA6C-201ENST00000341697 ZNF316A6NFI3 1004 aaPredicted RBP27.37■■□□□ 1.97
SEMA6C-201ENST00000341697 CHIC2Q9UKJ5 165 aa27.35■■□□□ 1.97
SEMA6C-201ENST00000341697 TSPY4P0CV99 314 aa27.34■■□□□ 1.97
SEMA6C-201ENST00000341697 TSPY10P0CW01 314 aa27.34■■□□□ 1.97
SEMA6C-201ENST00000341697 MROH2BQ7Z745 1585 aa27.32■■□□□ 1.96
SEMA6C-201ENST00000341697 SMARCA2P51531 1590 aa27.28■■□□□ 1.96
SEMA6C-201ENST00000341697 TONSLQ96HA7 1378 aa27.27■■□□□ 1.96
SEMA6C-201ENST00000341697 CEP162Q5TB80 1403 aa27.26■■□□□ 1.95
SEMA6C-201ENST00000341697 CHGAP10645 457 aaKnown RBP27.26■■□□□ 1.95
SEMA6C-201ENST00000341697 STAG3Q9UJ98 1225 aa27.25■■□□□ 1.95
SEMA6C-201ENST00000341697 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
SEMA6C-201ENST00000341697 PLEKHD1A6NEE1 506 aa27.23■■□□□ 1.95
SEMA6C-201ENST00000341697 DAXXQ9UER7 740 aaPredicted RBP27.23■■□□□ 1.95
SEMA6C-201ENST00000341697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.21■■□□□ 1.957e-6■□□□□ 10.8
SEMA6C-201ENST00000341697 TNIKQ9UKE5 1360 aa27.18■■□□□ 1.94
SEMA6C-201ENST00000341697 KCNH8Q96L42 1107 aa27.17■■□□□ 1.94
SEMA6C-201ENST00000341697 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
SEMA6C-201ENST00000341697 PLPPR3Q6T4P5 718 aa27.1■■□□□ 1.93
SEMA6C-201ENST00000341697 CUX2O14529 1486 aa27.08■■□□□ 1.93
SEMA6C-201ENST00000341697 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
SEMA6C-201ENST00000341697 NEFMP07197 916 aa27.05■■□□□ 1.92
SEMA6C-201ENST00000341697 CARMIL1Q5VZK9 1371 aa27.04■■□□□ 1.92
SEMA6C-201ENST00000341697 CLSPNQ9HAW4 1339 aa27.02■■□□□ 1.92
SEMA6C-201ENST00000341697 RRP7BPQ9NSQ0 103 aa26.99■■□□□ 1.91
SEMA6C-201ENST00000341697 CFDP1Q9UEE9 299 aaPredicted RBP26.96■■□□□ 1.91
SEMA6C-201ENST00000341697 TOP2AP11388 1531 aaKnown RBP26.96■■□□□ 1.91
SEMA6C-201ENST00000341697 SOGA1O94964 1423 aa26.95■■□□□ 1.91
SEMA6C-201ENST00000341697 WIZO95785 1651 aa26.91■■□□□ 1.9
SEMA6C-201ENST00000341697 ACIN1Q9UKV3 1341 aaKnown RBP26.88■■□□□ 1.89
SEMA6C-201ENST00000341697 SLC24A1O60721 1099 aa26.87■■□□□ 1.89
SEMA6C-201ENST00000341697 KDM2AQ9Y2K7 1162 aa26.87■■□□□ 1.89
SEMA6C-201ENST00000341697 ATAD2BQ9ULI0 1458 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms