RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 NISCHQ9Y2I1 1504 aa36.46■■■■□ 3.43
TNXB-205ENST00000486148 SHROOM4Q9ULL8 1493 aa31.06■■■□□ 2.56
TNXB-205ENST00000486148 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
TNXB-205ENST00000486148 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
TNXB-205ENST00000486148 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.46
TNXB-205ENST00000486148 DCAF8L2P0C7V8 631 aa30.16■■■□□ 2.42
TNXB-205ENST00000486148 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
TNXB-205ENST00000486148 CHIC1Q5VXU3 224 aa29.63■■■□□ 2.33
TNXB-205ENST00000486148 MYO15BQ96JP2 1530 aa29.56■■■□□ 2.32
TNXB-205ENST00000486148 ABCC9O60706 1549 aa29.11■■■□□ 2.25
TNXB-205ENST00000486148 SCRIBQ14160 1630 aa29.06■■■□□ 2.24
TNXB-205ENST00000486148 RSF1Q96T23 1441 aaPredicted RBP28.85■■■□□ 2.21
TNXB-205ENST00000486148 LOC105371045A0A1W2PR82 267 aa28.76■■■□□ 2.19
TNXB-205ENST00000486148 HRCP23327 699 aa28.71■■■□□ 2.19
TNXB-205ENST00000486148 PCGF6Q9BYE7 350 aa28.69■■■□□ 2.18
TNXB-205ENST00000486148 NACADO15069 1562 aa28.65■■■□□ 2.18
TNXB-205ENST00000486148 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
TNXB-205ENST00000486148 CECR2Q9BXF3 1484 aa28.45■■■□□ 2.14
TNXB-205ENST00000486148 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
TNXB-205ENST00000486148 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
TNXB-205ENST00000486148 WIZO95785 1651 aa28.21■■■□□ 2.11
TNXB-205ENST00000486148 TRIM26Q12899 539 aaPredicted RBP28.15■■■□□ 2.1
TNXB-205ENST00000486148 PPARGC1BQ86YN6 1023 aaKnown RBP28.13■■■□□ 2.09
TNXB-205ENST00000486148 FAM9AQ8IZU1 332 aaPredicted RBP28.13■■■□□ 2.09
TNXB-205ENST00000486148 BAZ1AQ9NRL2 1556 aaPredicted RBP28.02■■■□□ 2.08
TNXB-205ENST00000486148 EHMT2Q96KQ7 1210 aa27.89■■■□□ 2.05
TNXB-205ENST00000486148 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
TNXB-205ENST00000486148 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
TNXB-205ENST00000486148 SMARCA4P51532 1647 aa27.77■■■□□ 2.04
TNXB-205ENST00000486148 TOP2AP11388 1531 aaKnown RBP27.76■■■□□ 2.03
TNXB-205ENST00000486148 PELP1Q8IZL8 1130 aaKnown RBP27.73■■■□□ 2.03
TNXB-205ENST00000486148 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
TNXB-205ENST00000486148 SMARCA2P51531 1590 aa27.62■■■□□ 2.01
TNXB-205ENST00000486148 ABCC8Q09428 1581 aa27.58■■■□□ 2.01
TNXB-205ENST00000486148 ZEB1P37275 1124 aaPredicted RBP27.5■■□□□ 1.99
TNXB-205ENST00000486148 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.99
TNXB-205ENST00000486148 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.98
TNXB-205ENST00000486148 SOGA1O94964 1423 aa27.32■■□□□ 1.96
TNXB-205ENST00000486148 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
TNXB-205ENST00000486148 RUSC2Q8N2Y8 1516 aa27.19■■□□□ 1.94
TNXB-205ENST00000486148 SCAF1Q9H7N4 1312 aaKnown RBP27.18■■□□□ 1.94
TNXB-205ENST00000486148 CEP162Q5TB80 1403 aa27.17■■□□□ 1.94
TNXB-205ENST00000486148 WRNQ14191 1432 aaPredicted RBP eCLIP27.15■■□□□ 1.94
TNXB-205ENST00000486148 EEA1Q15075 1411 aa27.14■■□□□ 1.94
TNXB-205ENST00000486148 TNIKQ9UKE5 1360 aa27.13■■□□□ 1.93
TNXB-205ENST00000486148 CSRNP3Q8WYN3 585 aa27.13■■□□□ 1.93
TNXB-205ENST00000486148 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
TNXB-205ENST00000486148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.04■■□□□ 1.92
TNXB-205ENST00000486148 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
TNXB-205ENST00000486148 TTBK1Q5TCY1 1321 aaPredicted RBP26.99■■□□□ 1.91
TNXB-205ENST00000486148 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
TNXB-205ENST00000486148 GOLGA3Q08378 1498 aa26.97■■□□□ 1.91
TNXB-205ENST00000486148 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
TNXB-205ENST00000486148 CCER1Q8TC90 406 aaPredicted RBP26.94■■□□□ 1.9
TNXB-205ENST00000486148 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
TNXB-205ENST00000486148 KIF21BO75037 1637 aa26.81■■□□□ 1.88
TNXB-205ENST00000486148 CLIP1P30622 1438 aa26.66■■□□□ 1.86
TNXB-205ENST00000486148 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
TNXB-205ENST00000486148 RAPGEF2Q9Y4G8 1499 aa26.64■■□□□ 1.86
TNXB-205ENST00000486148 MYT1Q01538 1121 aa26.64■■□□□ 1.86
TNXB-205ENST00000486148 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
TNXB-205ENST00000486148 VPS8Q8N3P4 1428 aa26.56■■□□□ 1.84
TNXB-205ENST00000486148 HMGXB3Q12766 1538 aa26.52■■□□□ 1.84
TNXB-205ENST00000486148 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
TNXB-205ENST00000486148 RANGAP1P46060 587 aaPredicted RBP26.47■■□□□ 1.83
TNXB-205ENST00000486148 HNRNPUL2Q1KMD3 747 aaKnown RBP26.42■■□□□ 1.82
TNXB-205ENST00000486148 DIEXFQ68CQ4 756 aaKnown RBP26.42■■□□□ 1.82
TNXB-205ENST00000486148 ACIN1Q9UKV3 1341 aaKnown RBP26.41■■□□□ 1.82
TNXB-205ENST00000486148 CUX1P39880 1505 aa26.4■■□□□ 1.82
TNXB-205ENST00000486148 PRXQ9BXM0 1461 aa26.39■■□□□ 1.81
TNXB-205ENST00000486148 APLP2Q06481 763 aa26.37■■□□□ 1.81
TNXB-205ENST00000486148 ERICH3Q5RHP9 1530 aa26.37■■□□□ 1.81
TNXB-205ENST00000486148 NEUROD1Q13562 356 aa26.36■■□□□ 1.81
TNXB-205ENST00000486148 CFTRP13569 1480 aa26.31■■□□□ 1.8
TNXB-205ENST00000486148 ARAP1Q96P48 1450 aa26.27■■□□□ 1.8
TNXB-205ENST00000486148 KIF27Q86VH2 1401 aa26.24■■□□□ 1.79
TNXB-205ENST00000486148 ZNF316A6NFI3 1004 aaPredicted RBP26.23■■□□□ 1.79
TNXB-205ENST00000486148 GTF3C3Q9Y5Q9 886 aa26.2■■□□□ 1.78
TNXB-205ENST00000486148 KANK4Q5T7N3 995 aaPredicted RBP26.11■■□□□ 1.77
TNXB-205ENST00000486148 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
TNXB-205ENST00000486148 ARHGAP35Q9NRY4 1499 aa26.03■■□□□ 1.76
TNXB-205ENST00000486148 CENPBP07199 599 aaPredicted RBP26.01■■□□□ 1.76
TNXB-205ENST00000486148 CUX2O14529 1486 aa26■■□□□ 1.75
TNXB-205ENST00000486148 CADPSQ9ULU8 1353 aa26■■□□□ 1.75
TNXB-205ENST00000486148 IGF1RP08069 1367 aa25.97■■□□□ 1.75
TNXB-205ENST00000486148 RRBP1Q9P2E9 1410 aaKnown RBP25.95■■□□□ 1.74
TNXB-205ENST00000486148 DHX57Q6P158 1386 aaKnown RBP25.93■■□□□ 1.74
TNXB-205ENST00000486148 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
TNXB-205ENST00000486148 CLSPNQ9HAW4 1339 aa25.87■■□□□ 1.73
TNXB-205ENST00000486148 MIER1Q8N108 512 aa25.87■■□□□ 1.73
TNXB-205ENST00000486148 CARMIL1Q5VZK9 1371 aa25.85■■□□□ 1.73
TNXB-205ENST00000486148 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
TNXB-205ENST00000486148 CCNB3Q8WWL7 1395 aa25.82■■□□□ 1.72
TNXB-205ENST00000486148 YTHDC1Q96MU7 727 aaKnown RBP25.79■■□□□ 1.72
TNXB-205ENST00000486148 FANCD2Q9BXW9 1451 aa25.76■■□□□ 1.71
TNXB-205ENST00000486148 TIAM1Q13009 1591 aa25.75■■□□□ 1.71
TNXB-205ENST00000486148 MAP3K1Q13233 1512 aa25.71■■□□□ 1.71
TNXB-205ENST00000486148 ITGAEP38570 1179 aa25.71■■□□□ 1.71
TNXB-205ENST00000486148 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
TNXB-205ENST00000486148 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms