Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC13.2□□□□□ -0.3
KRTAP3-1Q9BYR8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KRTAP3-1Q9BYR8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KRTAP3-1Q9BYR8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP3-1Q9BYR8 AL133380.1-201ENST00000506013 324 ntBASIC13.19□□□□□ -0.3
KRTAP3-1Q9BYR8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP3-1Q9BYR8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
KRTAP3-1Q9BYR8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP3-1Q9BYR8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-1Q9BYR8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP3-1Q9BYR8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
KRTAP3-1Q9BYR8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC13.17□□□□□ -0.3
KRTAP3-1Q9BYR8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
KRTAP3-1Q9BYR8 BX255925.1-201ENST00000566954 1854 ntBASIC13.16□□□□□ -0.3
KRTAP3-1Q9BYR8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP3-1Q9BYR8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
KRTAP3-1Q9BYR8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP3-1Q9BYR8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP3-1Q9BYR8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KRTAP3-1Q9BYR8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KRTAP3-1Q9BYR8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC13.15□□□□□ -0.3
KRTAP3-1Q9BYR8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
KRTAP3-1Q9BYR8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
KRTAP3-1Q9BYR8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
KRTAP3-1Q9BYR8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
KRTAP3-1Q9BYR8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KRTAP3-1Q9BYR8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
KRTAP3-1Q9BYR8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC13.14□□□□□ -0.31
KRTAP3-1Q9BYR8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP3-1Q9BYR8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP3-1Q9BYR8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP3-1Q9BYR8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC13.13□□□□□ -0.31
KRTAP3-1Q9BYR8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC13.13□□□□□ -0.31
KRTAP3-1Q9BYR8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-1Q9BYR8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC13.13□□□□□ -0.31
KRTAP3-1Q9BYR8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC13.13□□□□□ -0.31
KRTAP3-1Q9BYR8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-1Q9BYR8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
KRTAP3-1Q9BYR8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC13.12□□□□□ -0.31
KRTAP3-1Q9BYR8 AC135731.1-201ENST00000569415 2548 ntBASIC13.12□□□□□ -0.31
KRTAP3-1Q9BYR8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC13.12□□□□□ -0.31
KRTAP3-1Q9BYR8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-1Q9BYR8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
KRTAP3-1Q9BYR8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-1Q9BYR8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
KRTAP3-1Q9BYR8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC13.12□□□□□ -0.31
KRTAP3-1Q9BYR8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC13.11□□□□□ -0.31
KRTAP3-1Q9BYR8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP3-1Q9BYR8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP3-1Q9BYR8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC13.11□□□□□ -0.31
KRTAP3-1Q9BYR8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
KRTAP3-1Q9BYR8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
KRTAP3-1Q9BYR8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
KRTAP3-1Q9BYR8 AP004833.2-201ENST00000532228 1454 ntBASIC13.1□□□□□ -0.31
KRTAP3-1Q9BYR8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-1Q9BYR8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC13.1□□□□□ -0.31
KRTAP3-1Q9BYR8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC13.1□□□□□ -0.31
KRTAP3-1Q9BYR8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-1Q9BYR8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-1Q9BYR8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-1Q9BYR8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
KRTAP3-1Q9BYR8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP3-1Q9BYR8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP3-1Q9BYR8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP3-1Q9BYR8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC13.09□□□□□ -0.31
KRTAP3-1Q9BYR8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP3-1Q9BYR8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP3-1Q9BYR8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP3-1Q9BYR8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
KRTAP3-1Q9BYR8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
KRTAP3-1Q9BYR8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-1Q9BYR8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
KRTAP3-1Q9BYR8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-1Q9BYR8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC13.08□□□□□ -0.32
KRTAP3-1Q9BYR8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-1Q9BYR8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-1Q9BYR8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-1Q9BYR8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-1Q9BYR8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC13.07□□□□□ -0.32
KRTAP3-1Q9BYR8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP3-1Q9BYR8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP3-1Q9BYR8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC13.07□□□□□ -0.32
KRTAP3-1Q9BYR8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP3-1Q9BYR8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP3-1Q9BYR8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP3-1Q9BYR8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP3-1Q9BYR8 LINC01003-201ENST00000564834 1764 ntBASIC13.07□□□□□ -0.32
KRTAP3-1Q9BYR8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC13.06□□□□□ -0.32
KRTAP3-1Q9BYR8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC13.06□□□□□ -0.32
KRTAP3-1Q9BYR8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms