Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6DO43924 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6DO43924 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6DO43924 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.1■□□□□ 0.81
PDE6DO43924 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.1■□□□□ 0.81
PDE6DO43924 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6DO43924 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.09■□□□□ 0.81
PDE6DO43924 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PDE6DO43924 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.09■□□□□ 0.81
PDE6DO43924 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.09■□□□□ 0.81
PDE6DO43924 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PDE6DO43924 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDE6DO43924 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDE6DO43924 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.08■□□□□ 0.8
PDE6DO43924 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
PDE6DO43924 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDE6DO43924 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDE6DO43924 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDE6DO43924 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.07■□□□□ 0.8
PDE6DO43924 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDE6DO43924 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6DO43924 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6DO43924 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6DO43924 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6DO43924 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6DO43924 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6DO43924 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6DO43924 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PDE6DO43924 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6DO43924 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.04■□□□□ 0.8
PDE6DO43924 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6DO43924 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.04■□□□□ 0.8
PDE6DO43924 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6DO43924 AL449106.1-201ENST00000608517 1980 ntBASIC20.03■□□□□ 0.8
PDE6DO43924 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6DO43924 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PDE6DO43924 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6DO43924 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6DO43924 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.02■□□□□ 0.79
PDE6DO43924 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6DO43924 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.01■□□□□ 0.79
PDE6DO43924 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6DO43924 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6DO43924 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6DO43924 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.01■□□□□ 0.79
PDE6DO43924 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6DO43924 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6DO43924 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6DO43924 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6DO43924 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6DO43924 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6DO43924 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6DO43924 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDE6DO43924 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.99■□□□□ 0.79
PDE6DO43924 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6DO43924 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PDE6DO43924 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6DO43924 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6DO43924 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDE6DO43924 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6DO43924 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6DO43924 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.97■□□□□ 0.79
PDE6DO43924 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6DO43924 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6DO43924 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6DO43924 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDE6DO43924 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6DO43924 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6DO43924 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.95■□□□□ 0.78
PDE6DO43924 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6DO43924 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PDE6DO43924 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6DO43924 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6DO43924 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6DO43924 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6DO43924 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6DO43924 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.94■□□□□ 0.78
PDE6DO43924 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDE6DO43924 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6DO43924 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6DO43924 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6DO43924 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6DO43924 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6DO43924 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6DO43924 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PDE6DO43924 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6DO43924 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6DO43924 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDE6DO43924 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6DO43924 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.91■□□□□ 0.78
PDE6DO43924 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6DO43924 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6DO43924 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.91■□□□□ 0.78
PDE6DO43924 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.91■□□□□ 0.78
PDE6DO43924 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6DO43924 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6DO43924 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.9■□□□□ 0.78
PDE6DO43924 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
PDE6DO43924 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDE6DO43924 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms