Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11BO00300 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11BO00300 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11BO00300 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11BO00300 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
TNFRSF11BO00300 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
TNFRSF11BO00300 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.89■■□□□ 1.41
TNFRSF11BO00300 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.88■■□□□ 1.41
TNFRSF11BO00300 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.88■■□□□ 1.41
TNFRSF11BO00300 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TNFRSF11BO00300 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11BO00300 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
TNFRSF11BO00300 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11BO00300 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11BO00300 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.86■■□□□ 1.41
TNFRSF11BO00300 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TNFRSF11BO00300 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
TNFRSF11BO00300 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11BO00300 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11BO00300 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11BO00300 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
TNFRSF11BO00300 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11BO00300 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNFRSF11BO00300 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TNFRSF11BO00300 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.83■■□□□ 1.41
TNFRSF11BO00300 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNFRSF11BO00300 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TNFRSF11BO00300 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.83■■□□□ 1.4
TNFRSF11BO00300 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.82■■□□□ 1.4
TNFRSF11BO00300 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11BO00300 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11BO00300 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.82■■□□□ 1.4
TNFRSF11BO00300 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11BO00300 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFRSF11BO00300 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.81■■□□□ 1.4
TNFRSF11BO00300 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNFRSF11BO00300 BX255925.1-201ENST00000566954 1854 ntBASIC23.81■■□□□ 1.4
TNFRSF11BO00300 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFRSF11BO00300 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.8■■□□□ 1.4
TNFRSF11BO00300 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
TNFRSF11BO00300 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TNFRSF11BO00300 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.79■■□□□ 1.4
TNFRSF11BO00300 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.79■■□□□ 1.4
TNFRSF11BO00300 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11BO00300 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11BO00300 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.79■■□□□ 1.4
TNFRSF11BO00300 AP004833.2-201ENST00000532228 1454 ntBASIC23.78■■□□□ 1.4
TNFRSF11BO00300 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.78■■□□□ 1.4
TNFRSF11BO00300 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNFRSF11BO00300 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNFRSF11BO00300 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TNFRSF11BO00300 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TNFRSF11BO00300 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNFRSF11BO00300 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNFRSF11BO00300 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNFRSF11BO00300 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.74■■□□□ 1.39
TNFRSF11BO00300 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNFRSF11BO00300 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNFRSF11BO00300 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNFRSF11BO00300 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TNFRSF11BO00300 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNFRSF11BO00300 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.73■■□□□ 1.39
TNFRSF11BO00300 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF11BO00300 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
TNFRSF11BO00300 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF11BO00300 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF11BO00300 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF11BO00300 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.71■■□□□ 1.39
TNFRSF11BO00300 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.7■■□□□ 1.39
TNFRSF11BO00300 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
TNFRSF11BO00300 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TNFRSF11BO00300 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFRSF11BO00300 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.69■■□□□ 1.38
TNFRSF11BO00300 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFRSF11BO00300 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.69■■□□□ 1.38
TNFRSF11BO00300 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF11BO00300 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF11BO00300 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF11BO00300 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms