Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.054e-6■■■■□ 22.6
XRN2Q9H0D6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.18■□□□□ 0.024e-6■■■■□ 22.6
XRN2Q9H0D6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.63e-7■■■■□ 22.6
XRN2Q9H0D6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.953e-7■■■■□ 22.6
XRN2Q9H0D6 SDF4-205ENST00000465727 2095 ntTSL 218.94■□□□□ 0.623e-7■■■■□ 22.6
XRN2Q9H0D6 SDF4-203ENST00000403997 728 ntTSL 315.87■□□□□ 0.133e-7■■■■□ 22.6
XRN2Q9H0D6 PKD1-220ENST00000487932 6464 ntTSL 515.28■□□□□ 0.043e-6■■■■□ 22.6
XRN2Q9H0D6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.062e-6■■■■□ 22.6
XRN2Q9H0D6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.112e-6■■■■□ 22.6
XRN2Q9H0D6 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.312e-6■■■■□ 22.6
XRN2Q9H0D6 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.432e-6■■■■□ 22.6
XRN2Q9H0D6 SHANK2-209ENST00000445654 522 ntTSL 317.58■□□□□ 0.43e-6■■■■□ 22.6
XRN2Q9H0D6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.15■□□□□ 0.343e-6■■■■□ 22.6
XRN2Q9H0D6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.42■□□□□ 0.223e-6■■■■□ 22.6
XRN2Q9H0D6 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.94■□□□□ 0.143e-6■■■■□ 22.6
XRN2Q9H0D6 SHANK2-205ENST00000412252 1376 ntTSL 513.83□□□□□ -0.23e-6■■■■□ 22.6
XRN2Q9H0D6 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.06□□□□□ -0.483e-6■■■■□ 22.6
XRN2Q9H0D6 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.62□□□□□ -0.553e-6■■■■□ 22.6
XRN2Q9H0D6 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.27□□□□□ -0.63e-6■■■■□ 22.6
XRN2Q9H0D6 SEPT2-244ENST00000495463 501 ntTSL 432.51■■■□□ 2.794e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-234ENST00000475474 749 ntTSL 230.57■■■□□ 2.484e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-238ENST00000482304 740 ntTSL 229.49■■■□□ 2.314e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-227ENST00000462147 576 ntTSL 429.32■■■□□ 2.284e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-229ENST00000466211 584 ntTSL 328.27■■■□□ 2.124e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-216ENST00000434955 480 ntTSL 328.05■■■□□ 2.084e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-217ENST00000436795 775 ntTSL 527.19■■□□□ 1.944e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-209ENST00000411484 561 ntTSL 426.95■■□□□ 1.94e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-243ENST00000494824 565 ntTSL 526.55■■□□□ 1.844e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-226ENST00000461048 1163 ntTSL 1 (best)26.55■■□□□ 1.844e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-231ENST00000469175 486 ntTSL 326.38■■□□□ 1.814e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.13■■□□□ 1.774e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-215ENST00000429791 724 ntTSL 424.54■■□□□ 1.524e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-210ENST00000420786 539 ntTSL 523.36■■□□□ 1.334e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-242ENST00000492978 775 ntTSL 321.23■□□□□ 0.994e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-213ENST00000428282 1005 ntTSL 321.23■□□□□ 0.994e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-218ENST00000437066 574 ntTSL 420.99■□□□□ 0.954e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.74e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.03■□□□□ 0.644e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.86■□□□□ 0.294e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-224ENST00000457335 570 ntTSL 414.02□□□□□ -0.174e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-240ENST00000484648 218 ntTSL 313.72□□□□□ -0.214e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-212ENST00000425899 738 ntTSL 513.64□□□□□ -0.234e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-230ENST00000467971 571 ntTSL 213.19□□□□□ -0.34e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.54e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-214ENST00000428524 644 ntTSL 511.83□□□□□ -0.524e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-201ENST00000360051 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.534e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-219ENST00000441533 372 ntTSL 511.5□□□□□ -0.574e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.774e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-221ENST00000445030 575 ntTSL 39.69□□□□□ -0.864e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-207ENST00000407017 650 ntTSL 49.69□□□□□ -0.864e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-241ENST00000484740 563 ntTSL 37.13□□□□□ -1.274e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-220ENST00000443492 558 ntTSL 56.7□□□□□ -1.344e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-228ENST00000464128 565 ntTSL 45.22□□□□□ -1.574e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-232ENST00000469434 583 ntTSL 35.22□□□□□ -1.574e-8■■■■□ 22.6
XRN2Q9H0D6 SEPT2-233ENST00000473479 659 ntTSL 24.02□□□□□ -1.774e-8■■■■□ 22.6
XRN2Q9H0D6 GTF2I-213ENST00000613513 538 ntTSL 423.47■■□□□ 1.353e-6■■■■□ 22.6
XRN2Q9H0D6 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC15.33■□□□□ 0.043e-6■■■■□ 22.6
XRN2Q9H0D6 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.093e-6■■■■□ 22.6
XRN2Q9H0D6 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.093e-6■■■■□ 22.6
XRN2Q9H0D6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.13e-6■■■■□ 22.6
XRN2Q9H0D6 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.413e-6■■■■□ 22.6
XRN2Q9H0D6 CHD4-214ENST00000545942 1317 ntTSL 1 (best)27.33■■□□□ 1.972e-13■■■■□ 22.5
XRN2Q9H0D6 SMG7-205ENST00000440812 1190 ntTSL 525.42■■□□□ 1.661e-6■■■■□ 22.5
XRN2Q9H0D6 CHD4-213ENST00000545584 553 ntTSL 423.87■■□□□ 1.412e-13■■■■□ 22.5
XRN2Q9H0D6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.06■■□□□ 1.281e-6■■■■□ 22.5
XRN2Q9H0D6 SMG7-203ENST00000367538 328 ntTSL 222.84■■□□□ 1.251e-6■■■■□ 22.5
XRN2Q9H0D6 SMG7-206ENST00000444547 580 ntTSL 422.42■■□□□ 1.181e-6■■■■□ 22.5
XRN2Q9H0D6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.992e-13■■■■□ 22.5
XRN2Q9H0D6 SMG7-213ENST00000507691 760 ntTSL 521.12■□□□□ 0.971e-6■■■■□ 22.5
XRN2Q9H0D6 REV1-203ENST00000413697 4727 ntTSL 219.86■□□□□ 0.772e-13■■■■□ 22.5
XRN2Q9H0D6 RPL23A-208ENST00000580755 412 ntTSL 219.83■□□□□ 0.772e-13■■■■□ 22.5
XRN2Q9H0D6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.58■□□□□ 0.732e-13■■■■□ 22.5
XRN2Q9H0D6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.631e-6■■■■□ 22.5
XRN2Q9H0D6 B3GNTL1-205ENST00000571394 774 ntTSL 318.73■□□□□ 0.591e-6■■■■□ 22.5
XRN2Q9H0D6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.41■□□□□ 0.542e-13■■■■□ 22.5
XRN2Q9H0D6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.37■□□□□ 0.532e-13■■■■□ 22.5
XRN2Q9H0D6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.534e-7■■■■□ 22.5
XRN2Q9H0D6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.25■□□□□ 0.352e-13■■■■□ 22.5
XRN2Q9H0D6 SMG7-204ENST00000419169 2483 ntAPPRIS ALT2 TSL 217.15■□□□□ 0.341e-6■■■■□ 22.5
XRN2Q9H0D6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.88■□□□□ 0.291e-7■■■■□ 22.5
XRN2Q9H0D6 NOP2-213ENST00000542015 1002 ntTSL 316.64■□□□□ 0.251e-6■■■■□ 22.5
XRN2Q9H0D6 RRBP1-207ENST00000468428 2200 ntTSL 216.58■□□□□ 0.241e-7■■■■□ 22.5
XRN2Q9H0D6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.16■□□□□ 0.182e-13■■■■□ 22.5
XRN2Q9H0D6 B3GNTL1-208ENST00000572977 2446 ntTSL 216.14■□□□□ 0.171e-6■■■■□ 22.5
XRN2Q9H0D6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.85■□□□□ 0.131e-6■■■■□ 22.5
XRN2Q9H0D6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.67■□□□□ 0.12e-13■■■■□ 22.5
XRN2Q9H0D6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.49■□□□□ 0.072e-13■■■■□ 22.5
XRN2Q9H0D6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.074e-7■■■■□ 22.5
XRN2Q9H0D6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.022e-13■■■■□ 22.5
XRN2Q9H0D6 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.012e-13■■■■□ 22.5
XRN2Q9H0D6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.022e-13■■■■□ 22.5
XRN2Q9H0D6 NOP2-216ENST00000542944 1080 ntTSL 514.9□□□□□ -0.021e-6■■■■□ 22.5
XRN2Q9H0D6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.042e-13■■■■□ 22.5
XRN2Q9H0D6 SLC38A3-203ENST00000439524 424 ntTSL 314.34□□□□□ -0.116e-6■■■■□ 22.5
XRN2Q9H0D6 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.162e-13■■■■□ 22.5
XRN2Q9H0D6 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.97□□□□□ -0.172e-13■■■■□ 22.5
XRN2Q9H0D6 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.272e-13■■■■□ 22.5
XRN2Q9H0D6 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC13.15□□□□□ -0.31e-6■■■■□ 22.5
XRN2Q9H0D6 LRMDA-209ENST00000593699 1124 ntTSL 1 (best)13.1□□□□□ -0.311e-6■■■■□ 22.5
XRN2Q9H0D6 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.322e-13■■■■□ 22.5
Retrieved 100 of 21,068 protein–RNA pairs in 121.4 ms