RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 DCAF8L2P0C7V8 631 aa26.87■■□□□ 1.89
PKD1-220ENST00000487932 EHMT2Q96KQ7 1210 aa25.09■■□□□ 1.61
PKD1-220ENST00000487932 SUPT5HO00267 1087 aaKnown RBP24.97■■□□□ 1.59
PKD1-220ENST00000487932 PELP1Q8IZL8 1130 aaKnown RBP24.49■■□□□ 1.51
PKD1-220ENST00000487932 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
PKD1-220ENST00000487932 APLP2Q06481 763 aa24.25■■□□□ 1.47
PKD1-220ENST00000487932 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
PKD1-220ENST00000487932 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
PKD1-220ENST00000487932 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
PKD1-220ENST00000487932 ERICH6Q7L0X2 663 aa23.85■■□□□ 1.41
PKD1-220ENST00000487932 ATP1B4Q9UN42 357 aaPredicted RBP23.77■■□□□ 1.4
PKD1-220ENST00000487932 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
PKD1-220ENST00000487932 CCER1Q8TC90 406 aaPredicted RBP23.45■■□□□ 1.35
PKD1-220ENST00000487932 CENPBP07199 599 aaPredicted RBP23.15■■□□□ 1.3
PKD1-220ENST00000487932 MYT1LQ9UL68 1186 aa23.15■■□□□ 1.3
PKD1-220ENST00000487932 YTHDC1Q96MU7 727 aaKnown RBP23.11■■□□□ 1.29
PKD1-220ENST00000487932 NEFLP07196 543 aa23.06■■□□□ 1.28
PKD1-220ENST00000487932 UBTFP17480 764 aaKnown RBP23.02■■□□□ 1.27
PKD1-220ENST00000487932 MYT1Q01538 1121 aa23.01■■□□□ 1.27
PKD1-220ENST00000487932 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
PKD1-220ENST00000487932 NISCHQ9Y2I1 1504 aa22.98■■□□□ 1.27
PKD1-220ENST00000487932 POLR3GLQ9BT43 218 aa22.95■■□□□ 1.26
PKD1-220ENST00000487932 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
PKD1-220ENST00000487932 CNGB1Q14028 1251 aaPredicted RBP22.83■■□□□ 1.25
PKD1-220ENST00000487932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.8■■□□□ 1.24
PKD1-220ENST00000487932 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
PKD1-220ENST00000487932 PPARGC1BQ86YN6 1023 aaKnown RBP22.8■■□□□ 1.24
PKD1-220ENST00000487932 DAXXQ9UER7 740 aaPredicted RBP22.78■■□□□ 1.24
PKD1-220ENST00000487932 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
PKD1-220ENST00000487932 ZEB1P37275 1124 aaPredicted RBP22.68■■□□□ 1.22
PKD1-220ENST00000487932 ITGAEP38570 1179 aa22.66■■□□□ 1.22
PKD1-220ENST00000487932 CLSPNQ9HAW4 1339 aa22.28■■□□□ 1.16
PKD1-220ENST00000487932 ZNF316A6NFI3 1004 aaPredicted RBP22.2■■□□□ 1.14
PKD1-220ENST00000487932 SLC24A1O60721 1099 aa22.12■■□□□ 1.13
PKD1-220ENST00000487932 BCL11AQ9H165 835 aa22.11■■□□□ 1.13
PKD1-220ENST00000487932 RTL5Q5HYW3 569 aaPredicted RBP21.94■■□□□ 1.1
PKD1-220ENST00000487932 BCANQ96GW7 911 aa21.88■■□□□ 1.09
PKD1-220ENST00000487932 TRIM52Q96A61 297 aa21.87■■□□□ 1.09
PKD1-220ENST00000487932 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
PKD1-220ENST00000487932 ZBTB47Q9UFB7 747 aaPredicted RBP21.85■■□□□ 1.09
PKD1-220ENST00000487932 FAM50AQ14320 339 aaKnown RBP21.84■■□□□ 1.09
PKD1-220ENST00000487932 ZNF326Q5BKZ1 582 aaKnown RBP21.8■■□□□ 1.08
PKD1-220ENST00000487932 HRCP23327 699 aa21.74■■□□□ 1.07
PKD1-220ENST00000487932 NEUROD1Q13562 356 aa21.73■■□□□ 1.07
PKD1-220ENST00000487932 LOC105371045A0A1W2PR82 267 aa21.69■■□□□ 1.06
PKD1-220ENST00000487932 FBLN2P98095 1184 aa21.67■■□□□ 1.06
PKD1-220ENST00000487932 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
PKD1-220ENST00000487932 CANXP27824 592 aaKnown RBP21.63■■□□□ 1.05
PKD1-220ENST00000487932 NEFMP07197 916 aa21.49■■□□□ 1.03
PKD1-220ENST00000487932 ARID3CA6NKF2 412 aa21.46■■□□□ 1.03
PKD1-220ENST00000487932 DIEXFQ68CQ4 756 aaKnown RBP21.43■■□□□ 1.02
PKD1-220ENST00000487932 ANP32CO43423 234 aa21.34■■□□□ 1.01
PKD1-220ENST00000487932 CDK11AQ9UQ88 783 aaPredicted RBP21.31■■□□□ 1
PKD1-220ENST00000487932 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
PKD1-220ENST00000487932 ESF1Q9H501 851 aaKnown RBP21.31■■□□□ 1
PKD1-220ENST00000487932 NPM2Q86SE8 214 aaKnown RBP21.25■□□□□ 0.99
PKD1-220ENST00000487932 ZNF777Q9ULD5 760 aaPredicted RBP21.24■□□□□ 0.99
PKD1-220ENST00000487932 STAG3Q9UJ98 1225 aa21.23■□□□□ 0.99
PKD1-220ENST00000487932 A0A0G2JS52 829 aa21.23■□□□□ 0.99
PKD1-220ENST00000487932 CHGAP10645 457 aaKnown RBP21.22■□□□□ 0.99
PKD1-220ENST00000487932 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
PKD1-220ENST00000487932 P3H3Q8IVL6 736 aa21.19■□□□□ 0.98
PKD1-220ENST00000487932 HSP90AA1P07900 732 aaKnown RBP21.11■□□□□ 0.97
PKD1-220ENST00000487932 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
PKD1-220ENST00000487932 GTF3C3Q9Y5Q9 886 aa21.03■□□□□ 0.96
PKD1-220ENST00000487932 ANP32AP39687 249 aaKnown RBP21.01■□□□□ 0.95
PKD1-220ENST00000487932 ANP32BQ92688 251 aaKnown RBP21.01■□□□□ 0.95
PKD1-220ENST00000487932 ZBTB7CA1YPR0 619 aa20.98■□□□□ 0.95
PKD1-220ENST00000487932 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
PKD1-220ENST00000487932 SALL2Q9Y467 1007 aaPredicted RBP20.97■□□□□ 0.95
PKD1-220ENST00000487932 EIF5BO60841 1220 aaKnown RBP20.96■□□□□ 0.95
PKD1-220ENST00000487932 ARXQ96QS3 562 aa20.91■□□□□ 0.94
PKD1-220ENST00000487932 CDK11BP21127 795 aaKnown RBP20.87■□□□□ 0.93
PKD1-220ENST00000487932 TULP1O00294 542 aaPredicted RBP20.83■□□□□ 0.93
PKD1-220ENST00000487932 NPM1P06748 294 aaKnown RBP eCLIP20.83■□□□□ 0.93
PKD1-220ENST00000487932 ABCC9O60706 1549 aa20.83■□□□□ 0.93
PKD1-220ENST00000487932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.925e-7■□□□□ 9.7
PKD1-220ENST00000487932 UPF2Q9HAU5 1272 aaKnown RBP20.81■□□□□ 0.92
PKD1-220ENST00000487932 C14orf37Q86TY3 774 aa20.8■□□□□ 0.92
PKD1-220ENST00000487932 FAM9BQ8IZU0 186 aa20.75■□□□□ 0.91
PKD1-220ENST00000487932 FKBP8Q14318 412 aa20.66■□□□□ 0.9
PKD1-220ENST00000487932 HAP1P54257 671 aaPredicted RBP20.64■□□□□ 0.9
PKD1-220ENST00000487932 HNRNPUQ00839 825 aaKnown RBP eCLIP20.62■□□□□ 0.89
PKD1-220ENST00000487932 KDM2AQ9Y2K7 1162 aa20.62■□□□□ 0.89
PKD1-220ENST00000487932 NBR1Q14596 966 aa20.6■□□□□ 0.89
PKD1-220ENST00000487932 WDR43Q15061 677 aaKnown RBP eCLIP20.59■□□□□ 0.89
PKD1-220ENST00000487932 CHIC2Q9UKJ5 165 aa20.59■□□□□ 0.89
PKD1-220ENST00000487932 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.57■□□□□ 0.88
PKD1-220ENST00000487932 TPRNQ4KMQ1 711 aa20.57■□□□□ 0.88
PKD1-220ENST00000487932 TONSLQ96HA7 1378 aa20.55■□□□□ 0.88
PKD1-220ENST00000487932 MYH16Q9H6N6 1097 aa20.54■□□□□ 0.88
PKD1-220ENST00000487932 TAOK2Q9UL54 1235 aa20.54■□□□□ 0.88
PKD1-220ENST00000487932 TMC1Q8TDI8 760 aa20.53■□□□□ 0.88
PKD1-220ENST00000487932 NCBP3Q53F19 620 aaKnown RBP20.51■□□□□ 0.87
PKD1-220ENST00000487932 PPP1R15AO75807 674 aaPredicted RBP20.5■□□□□ 0.87
PKD1-220ENST00000487932 DDX10Q13206 875 aaKnown RBP20.5■□□□□ 0.87
PKD1-220ENST00000487932 CCDC136Q96JN2 1154 aa20.48■□□□□ 0.87
PKD1-220ENST00000487932 NPHP1O15259 732 aa20.46■□□□□ 0.87
PKD1-220ENST00000487932 ARID4BQ4LE39 1312 aaPredicted RBP20.43■□□□□ 0.86
PKD1-220ENST00000487932 IRX6P78412 446 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms