RNA–Protein interactions for RNA: ENST00000477616.1

KCNC3-203, Transcript of potassium voltage-gated channel subfamily C member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KCNC3, Length 3,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC3-203ENST00000477616 NISCHQ9Y2I1 1504 aa39.17■■■■□ 3.86
KCNC3-203ENST00000477616 SHROOM4Q9ULL8 1493 aa34.35■■■■□ 3.09
KCNC3-203ENST00000477616 SUPT5HO00267 1087 aaKnown RBP33.75■■■□□ 2.99
KCNC3-203ENST00000477616 DCAF8L2P0C7V8 631 aa33.73■■■□□ 2.99
KCNC3-203ENST00000477616 ZCCHC6Q5VYS8 1495 aaKnown RBP33.02■■■□□ 2.88
KCNC3-203ENST00000477616 CCDC180Q9P1Z9 1646 aa32.81■■■□□ 2.84
KCNC3-203ENST00000477616 CHIC1Q5VXU3 224 aa32.38■■■□□ 2.77
KCNC3-203ENST00000477616 MYO15BQ96JP2 1530 aa32.11■■■□□ 2.73
KCNC3-203ENST00000477616 LOC105371045A0A1W2PR82 267 aa31.78■■■□□ 2.68
KCNC3-203ENST00000477616 PCGF6Q9BYE7 350 aa31.74■■■□□ 2.67
KCNC3-203ENST00000477616 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
KCNC3-203ENST00000477616 SCRIBQ14160 1630 aa31.46■■■□□ 2.63
KCNC3-203ENST00000477616 EHMT2Q96KQ7 1210 aa31.41■■■□□ 2.62
KCNC3-203ENST00000477616 ABCC9O60706 1549 aa31.38■■■□□ 2.61
KCNC3-203ENST00000477616 HRCP23327 699 aa31.35■■■□□ 2.61
KCNC3-203ENST00000477616 FAM9AQ8IZU1 332 aaPredicted RBP31.35■■■□□ 2.61
KCNC3-203ENST00000477616 TRIM41Q8WV44 630 aa31.19■■■□□ 2.58
KCNC3-203ENST00000477616 RSF1Q96T23 1441 aaPredicted RBP31.19■■■□□ 2.58
KCNC3-203ENST00000477616 PPARGC1BQ86YN6 1023 aaKnown RBP31.15■■■□□ 2.58
KCNC3-203ENST00000477616 CECR2Q9BXF3 1484 aa30.88■■■□□ 2.53
KCNC3-203ENST00000477616 RB1CC1Q8TDY2 1594 aa30.81■■■□□ 2.52
KCNC3-203ENST00000477616 TRIM26Q12899 539 aaPredicted RBP30.76■■■□□ 2.51
KCNC3-203ENST00000477616 MROH2BQ7Z745 1585 aa30.63■■■□□ 2.49
KCNC3-203ENST00000477616 NACADO15069 1562 aa30.6■■■□□ 2.49
KCNC3-203ENST00000477616 WIZO95785 1651 aa30.41■■■□□ 2.46
KCNC3-203ENST00000477616 PABPN1Q86U42 306 aaKnown RBP eCLIP30.35■■■□□ 2.45
KCNC3-203ENST00000477616 TTBK1Q5TCY1 1321 aaPredicted RBP30.31■■■□□ 2.44
KCNC3-203ENST00000477616 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
KCNC3-203ENST00000477616 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
KCNC3-203ENST00000477616 ZEB1P37275 1124 aaPredicted RBP29.93■■■□□ 2.38
KCNC3-203ENST00000477616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.91■■■□□ 2.38
KCNC3-203ENST00000477616 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.38
KCNC3-203ENST00000477616 UBTFP17480 764 aaKnown RBP29.87■■■□□ 2.37
KCNC3-203ENST00000477616 CCER1Q8TC90 406 aaPredicted RBP29.77■■■□□ 2.36
KCNC3-203ENST00000477616 SOGA1O94964 1423 aa29.75■■■□□ 2.35
KCNC3-203ENST00000477616 SMARCA4P51532 1647 aa29.75■■■□□ 2.35
KCNC3-203ENST00000477616 TOP2AP11388 1531 aaKnown RBP29.73■■■□□ 2.35
KCNC3-203ENST00000477616 RANGAP1P46060 587 aaPredicted RBP29.71■■■□□ 2.35
KCNC3-203ENST00000477616 CSRNP3Q8WYN3 585 aa29.65■■■□□ 2.34
KCNC3-203ENST00000477616 SMARCA2P51531 1590 aa29.63■■■□□ 2.33
KCNC3-203ENST00000477616 RUSC2Q8N2Y8 1516 aa29.61■■■□□ 2.33
KCNC3-203ENST00000477616 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
KCNC3-203ENST00000477616 UNC13AQ9UPW8 1703 aa29.55■■■□□ 2.32
KCNC3-203ENST00000477616 CEP162Q5TB80 1403 aa29.51■■■□□ 2.31
KCNC3-203ENST00000477616 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
KCNC3-203ENST00000477616 WRNQ14191 1432 aaPredicted RBP eCLIP29.37■■■□□ 2.292e-8■■■□□ 16.7
KCNC3-203ENST00000477616 SCAF1Q9H7N4 1312 aaKnown RBP29.35■■■□□ 2.29
KCNC3-203ENST00000477616 TNIKQ9UKE5 1360 aa29.33■■■□□ 2.29
KCNC3-203ENST00000477616 HNRNPUL2Q1KMD3 747 aaKnown RBP29.29■■■□□ 2.28
KCNC3-203ENST00000477616 BAZ1BQ9UIG0 1483 aaKnown RBP29.18■■■□□ 2.26
KCNC3-203ENST00000477616 ATAD2BQ9ULI0 1458 aa29.18■■■□□ 2.26
KCNC3-203ENST00000477616 GOLGA3Q08378 1498 aa29.15■■■□□ 2.26
KCNC3-203ENST00000477616 EEA1Q15075 1411 aa29.15■■■□□ 2.26
KCNC3-203ENST00000477616 APLP2Q06481 763 aa29.14■■■□□ 2.26
KCNC3-203ENST00000477616 SYNJ1O43426 1573 aa29.06■■■□□ 2.24
KCNC3-203ENST00000477616 DIEXFQ68CQ4 756 aaKnown RBP29.04■■■□□ 2.24
KCNC3-203ENST00000477616 CLIP1P30622 1438 aa29.01■■■□□ 2.23
KCNC3-203ENST00000477616 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.23
KCNC3-203ENST00000477616 RAPGEF2Q9Y4G8 1499 aa28.93■■■□□ 2.22
KCNC3-203ENST00000477616 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.22
KCNC3-203ENST00000477616 NEUROD1Q13562 356 aa28.82■■■□□ 2.2
KCNC3-203ENST00000477616 YTHDC1Q96MU7 727 aaKnown RBP28.76■■■□□ 2.2
KCNC3-203ENST00000477616 PELP1Q8IZL8 1130 aaKnown RBP28.76■■■□□ 2.19
KCNC3-203ENST00000477616 ZNF316A6NFI3 1004 aaPredicted RBP28.72■■■□□ 2.19
KCNC3-203ENST00000477616 VPS8Q8N3P4 1428 aa28.72■■■□□ 2.19
KCNC3-203ENST00000477616 ITGAEP38570 1179 aa28.68■■■□□ 2.18
KCNC3-203ENST00000477616 ACIN1Q9UKV3 1341 aaKnown RBP28.67■■■□□ 2.18
KCNC3-203ENST00000477616 GTF3C3Q9Y5Q9 886 aa28.64■■■□□ 2.18
KCNC3-203ENST00000477616 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.17
KCNC3-203ENST00000477616 KIF21BO75037 1637 aa28.63■■■□□ 2.17
KCNC3-203ENST00000477616 CENPBP07199 599 aaPredicted RBP28.56■■■□□ 2.16
KCNC3-203ENST00000477616 TOP2BQ02880 1626 aa28.52■■■□□ 2.16
KCNC3-203ENST00000477616 ATP1B4Q9UN42 357 aaPredicted RBP28.51■■■□□ 2.15
KCNC3-203ENST00000477616 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
KCNC3-203ENST00000477616 MIER1Q8N108 512 aa28.46■■■□□ 2.15
KCNC3-203ENST00000477616 KIF27Q86VH2 1401 aa28.45■■■□□ 2.14
KCNC3-203ENST00000477616 P3H3Q8IVL6 736 aa28.45■■■□□ 2.14
KCNC3-203ENST00000477616 CUX1P39880 1505 aa28.44■■■□□ 2.14
KCNC3-203ENST00000477616 PRXQ9BXM0 1461 aa28.39■■■□□ 2.13
KCNC3-203ENST00000477616 ARAP1Q96P48 1450 aa28.35■■■□□ 2.13
KCNC3-203ENST00000477616 CUX2O14529 1486 aa28.3■■■□□ 2.12
KCNC3-203ENST00000477616 CFTRP13569 1480 aa28.3■■■□□ 2.12
KCNC3-203ENST00000477616 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
KCNC3-203ENST00000477616 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.11
KCNC3-203ENST00000477616 IGF1RP08069 1367 aa28.19■■■□□ 2.1
KCNC3-203ENST00000477616 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
KCNC3-203ENST00000477616 FAM50AQ14320 339 aaKnown RBP28.17■■■□□ 2.1
KCNC3-203ENST00000477616 CADPSQ9ULU8 1353 aa28.17■■■□□ 2.1
KCNC3-203ENST00000477616 DHX57Q6P158 1386 aaKnown RBP28.17■■■□□ 2.1
KCNC3-203ENST00000477616 ARHGAP35Q9NRY4 1499 aa28.14■■■□□ 2.1
KCNC3-203ENST00000477616 CARMIL1Q5VZK9 1371 aa28.14■■■□□ 2.1
KCNC3-203ENST00000477616 CCNB3Q8WWL7 1395 aa28.09■■■□□ 2.09
KCNC3-203ENST00000477616 FGD5Q6ZNL6 1462 aa28.05■■■□□ 2.08
KCNC3-203ENST00000477616 RAD54L2Q9Y4B4 1467 aa27.95■■■□□ 2.07
KCNC3-203ENST00000477616 RRBP1Q9P2E9 1410 aaKnown RBP27.93■■■□□ 2.06
KCNC3-203ENST00000477616 SIN3AQ96ST3 1273 aa27.91■■■□□ 2.06
KCNC3-203ENST00000477616 FANCD2Q9BXW9 1451 aa27.9■■■□□ 2.06
KCNC3-203ENST00000477616 RAB3GAP2Q9H2M9 1393 aa27.9■■■□□ 2.06
KCNC3-203ENST00000477616 NESP48681 1621 aa27.89■■■□□ 2.06
KCNC3-203ENST00000477616 CLSPNQ9HAW4 1339 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms