RNA–Protein interactions for RNA: ENST00000420247.6

SCYL1-203, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 1 (best) BASIC

Gene SCYL1, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-203ENST00000420247 NISCHQ9Y2I1 1504 aa38.96■■■■□ 3.83
SCYL1-203ENST00000420247 CCDC180Q9P1Z9 1646 aa33.3■■■□□ 2.92
SCYL1-203ENST00000420247 SHROOM4Q9ULL8 1493 aa33.03■■■□□ 2.88
SCYL1-203ENST00000420247 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
SCYL1-203ENST00000420247 DCAF8L2P0C7V8 631 aa32.5■■■□□ 2.79
SCYL1-203ENST00000420247 SUPT5HO00267 1087 aaKnown RBP32.2■■■□□ 2.75
SCYL1-203ENST00000420247 DCAF1Q9Y4B6 1507 aa31.91■■■□□ 2.7
SCYL1-203ENST00000420247 SCRIBQ14160 1630 aa31.22■■■□□ 2.59
SCYL1-203ENST00000420247 ABCC9O60706 1549 aa31.21■■■□□ 2.59
SCYL1-203ENST00000420247 MYO15BQ96JP2 1530 aa31.11■■■□□ 2.57
SCYL1-203ENST00000420247 CHIC1Q5VXU3 224 aa31.09■■■□□ 2.57
SCYL1-203ENST00000420247 NACADO15069 1562 aa30.85■■■□□ 2.53
SCYL1-203ENST00000420247 RSF1Q96T23 1441 aaPredicted RBP30.69■■■□□ 2.5
SCYL1-203ENST00000420247 CECR2Q9BXF3 1484 aa30.47■■■□□ 2.47
SCYL1-203ENST00000420247 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
SCYL1-203ENST00000420247 MROH2BQ7Z745 1585 aa30.31■■■□□ 2.44
SCYL1-203ENST00000420247 LOC105371045A0A1W2PR82 267 aa30.21■■■□□ 2.43
SCYL1-203ENST00000420247 WIZO95785 1651 aa30.17■■■□□ 2.42
SCYL1-203ENST00000420247 UNC13AQ9UPW8 1703 aa30.12■■■□□ 2.41
SCYL1-203ENST00000420247 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
SCYL1-203ENST00000420247 BAZ1AQ9NRL2 1556 aaPredicted RBP29.95■■■□□ 2.38
SCYL1-203ENST00000420247 PABPN1Q86U42 306 aaKnown RBP eCLIP29.79■■■□□ 2.36
SCYL1-203ENST00000420247 FAM9AQ8IZU1 332 aaPredicted RBP29.79■■■□□ 2.36
SCYL1-203ENST00000420247 PCGF6Q9BYE7 350 aa29.78■■■□□ 2.36
SCYL1-203ENST00000420247 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
SCYL1-203ENST00000420247 BICRAQ9NZM4 1560 aa29.68■■■□□ 2.34
SCYL1-203ENST00000420247 TOP2AP11388 1531 aaKnown RBP29.61■■■□□ 2.33
SCYL1-203ENST00000420247 EHMT2Q96KQ7 1210 aa29.6■■■□□ 2.33
SCYL1-203ENST00000420247 EIF4G1Q04637 1599 aaKnown RBP29.54■■■□□ 2.32
SCYL1-203ENST00000420247 CCDC88BA6NC98 1476 aa29.5■■■□□ 2.31
SCYL1-203ENST00000420247 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
SCYL1-203ENST00000420247 HRCP23327 699 aa29.45■■■□□ 2.31
SCYL1-203ENST00000420247 ABCC8Q09428 1581 aa29.37■■■□□ 2.29
SCYL1-203ENST00000420247 TRIM26Q12899 539 aaPredicted RBP29.23■■■□□ 2.27
SCYL1-203ENST00000420247 PEG3Q9GZU2 1588 aa29.18■■■□□ 2.26
SCYL1-203ENST00000420247 ATAD2BQ9ULI0 1458 aa29.07■■■□□ 2.24
SCYL1-203ENST00000420247 PPARGC1BQ86YN6 1023 aaKnown RBP29.02■■■□□ 2.24
SCYL1-203ENST00000420247 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
SCYL1-203ENST00000420247 SOGA1O94964 1423 aa28.98■■■□□ 2.23
SCYL1-203ENST00000420247 RUSC2Q8N2Y8 1516 aa28.89■■■□□ 2.22
SCYL1-203ENST00000420247 WRNQ14191 1432 aaPredicted RBP eCLIP28.84■■■□□ 2.21
SCYL1-203ENST00000420247 SYNJ1O43426 1573 aa28.76■■■□□ 2.2
SCYL1-203ENST00000420247 CSRNP3Q8WYN3 585 aa28.74■■■□□ 2.19
SCYL1-203ENST00000420247 EEA1Q15075 1411 aa28.66■■■□□ 2.18
SCYL1-203ENST00000420247 CEP162Q5TB80 1403 aa28.64■■■□□ 2.17
SCYL1-203ENST00000420247 UBTFP17480 764 aaKnown RBP28.63■■■□□ 2.17
SCYL1-203ENST00000420247 TNIKQ9UKE5 1360 aa28.58■■■□□ 2.17
SCYL1-203ENST00000420247 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
SCYL1-203ENST00000420247 TTBK1Q5TCY1 1321 aaPredicted RBP28.53■■■□□ 2.16
SCYL1-203ENST00000420247 HMGXB3Q12766 1538 aa28.52■■■□□ 2.16
SCYL1-203ENST00000420247 GOLGA3Q08378 1498 aa28.51■■■□□ 2.15
SCYL1-203ENST00000420247 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
SCYL1-203ENST00000420247 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
SCYL1-203ENST00000420247 KIF21BO75037 1637 aa28.35■■■□□ 2.13
SCYL1-203ENST00000420247 ZEB1P37275 1124 aaPredicted RBP28.34■■■□□ 2.13
SCYL1-203ENST00000420247 BIVM-ERCC5R4GMW8 1640 aa28.32■■■□□ 2.12
SCYL1-203ENST00000420247 RAPGEF2Q9Y4G8 1499 aa28.29■■■□□ 2.12
SCYL1-203ENST00000420247 RANGAP1P46060 587 aaPredicted RBP28.24■■■□□ 2.11
SCYL1-203ENST00000420247 CFTRP13569 1480 aa28.24■■■□□ 2.11
SCYL1-203ENST00000420247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.23■■■□□ 2.11
SCYL1-203ENST00000420247 CUX1P39880 1505 aa28.23■■■□□ 2.11
SCYL1-203ENST00000420247 CLIP1P30622 1438 aa28.18■■■□□ 2.1
SCYL1-203ENST00000420247 CC2D2AQ9P2K1 1620 aa28.11■■■□□ 2.09
SCYL1-203ENST00000420247 CCER1Q8TC90 406 aaPredicted RBP28.08■■■□□ 2.09
SCYL1-203ENST00000420247 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
SCYL1-203ENST00000420247 PRXQ9BXM0 1461 aa28■■■□□ 2.07
SCYL1-203ENST00000420247 VPS8Q8N3P4 1428 aa27.99■■■□□ 2.07
SCYL1-203ENST00000420247 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
SCYL1-203ENST00000420247 KIF27Q86VH2 1401 aa27.96■■■□□ 2.07
SCYL1-203ENST00000420247 ERICH3Q5RHP9 1530 aa27.95■■■□□ 2.06
SCYL1-203ENST00000420247 APLP2Q06481 763 aa27.86■■■□□ 2.05
SCYL1-203ENST00000420247 CUX2O14529 1486 aa27.81■■■□□ 2.04
SCYL1-203ENST00000420247 HNRNPUL2Q1KMD3 747 aaKnown RBP27.79■■■□□ 2.04
SCYL1-203ENST00000420247 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
SCYL1-203ENST00000420247 ARAP1Q96P48 1450 aa27.79■■■□□ 2.04
SCYL1-203ENST00000420247 FANCD2Q9BXW9 1451 aa27.74■■■□□ 2.03
SCYL1-203ENST00000420247 NESP48681 1621 aa27.73■■■□□ 2.03
SCYL1-203ENST00000420247 IGF1RP08069 1367 aa27.71■■■□□ 2.03
SCYL1-203ENST00000420247 KANK4Q5T7N3 995 aaPredicted RBP27.62■■■□□ 2.01
SCYL1-203ENST00000420247 ARHGAP35Q9NRY4 1499 aa27.62■■■□□ 2.01
SCYL1-203ENST00000420247 CARMIL1Q5VZK9 1371 aa27.59■■■□□ 2.01
SCYL1-203ENST00000420247 RAD54L2Q9Y4B4 1467 aa27.58■■■□□ 2.01
SCYL1-203ENST00000420247 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
SCYL1-203ENST00000420247 DNMBPQ6XZF7 1577 aa27.54■■■□□ 2
SCYL1-203ENST00000420247 TOPBP1Q92547 1522 aa27.53■■■□□ 2
SCYL1-203ENST00000420247 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
SCYL1-203ENST00000420247 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
SCYL1-203ENST00000420247 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
SCYL1-203ENST00000420247 URB2Q14146 1524 aaKnown RBP27.38■■□□□ 1.97
SCYL1-203ENST00000420247 P3H3Q8IVL6 736 aa27.38■■□□□ 1.97
SCYL1-203ENST00000420247 DIEXFQ68CQ4 756 aaKnown RBP27.3■■□□□ 1.96
SCYL1-203ENST00000420247 RRBP1Q9P2E9 1410 aaKnown RBP27.27■■□□□ 1.96
SCYL1-203ENST00000420247 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
SCYL1-203ENST00000420247 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
SCYL1-203ENST00000420247 WDR97A6NE52 1622 aa27.25■■□□□ 1.95
SCYL1-203ENST00000420247 TIAM1Q13009 1591 aa27.24■■□□□ 1.95
SCYL1-203ENST00000420247 ITGAEP38570 1179 aa27.23■■□□□ 1.95
SCYL1-203ENST00000420247 PDS5BQ9NTI5 1447 aa27.22■■□□□ 1.95
SCYL1-203ENST00000420247 ATP1B4Q9UN42 357 aaPredicted RBP27.22■■□□□ 1.95
SCYL1-203ENST00000420247 CUL7Q14999 1698 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms