RNA–Protein interactions for RNA: ENST00000270176.9

SCYL1-201, Transcript of SCY1 like pseudokinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCYL1, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-201ENST00000270176 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
SCYL1-201ENST00000270176 SHROOM4Q9ULL8 1493 aa27.12■■□□□ 1.93
SCYL1-201ENST00000270176 CCDC180Q9P1Z9 1646 aa26.86■■□□□ 1.89
SCYL1-201ENST00000270176 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
SCYL1-201ENST00000270176 ZCCHC6Q5VYS8 1495 aaKnown RBP26.66■■□□□ 1.86
SCYL1-201ENST00000270176 SUPT5HO00267 1087 aaKnown RBP26.43■■□□□ 1.82
SCYL1-201ENST00000270176 DCAF1Q9Y4B6 1507 aa25.76■■□□□ 1.71
SCYL1-201ENST00000270176 ABCC9O60706 1549 aa25.52■■□□□ 1.68
SCYL1-201ENST00000270176 SCRIBQ14160 1630 aa25.43■■□□□ 1.66
SCYL1-201ENST00000270176 CHIC1Q5VXU3 224 aa25.38■■□□□ 1.65
SCYL1-201ENST00000270176 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
SCYL1-201ENST00000270176 RSF1Q96T23 1441 aaPredicted RBP24.98■■□□□ 1.59
SCYL1-201ENST00000270176 NACADO15069 1562 aa24.97■■□□□ 1.59
SCYL1-201ENST00000270176 HRCP23327 699 aa24.92■■□□□ 1.58
SCYL1-201ENST00000270176 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
SCYL1-201ENST00000270176 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
SCYL1-201ENST00000270176 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
SCYL1-201ENST00000270176 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
SCYL1-201ENST00000270176 MROH2BQ7Z745 1585 aa24.67■■□□□ 1.54
SCYL1-201ENST00000270176 WIZO95785 1651 aa24.53■■□□□ 1.52
SCYL1-201ENST00000270176 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
SCYL1-201ENST00000270176 FAM9AQ8IZU1 332 aaPredicted RBP24.5■■□□□ 1.51
SCYL1-201ENST00000270176 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
SCYL1-201ENST00000270176 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
SCYL1-201ENST00000270176 UNC13AQ9UPW8 1703 aa24.37■■□□□ 1.49
SCYL1-201ENST00000270176 PPARGC1BQ86YN6 1023 aaKnown RBP24.3■■□□□ 1.48
SCYL1-201ENST00000270176 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
SCYL1-201ENST00000270176 TRIM26Q12899 539 aaPredicted RBP24.22■■□□□ 1.47
SCYL1-201ENST00000270176 SMARCA4P51532 1647 aa24.15■■□□□ 1.46
SCYL1-201ENST00000270176 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
SCYL1-201ENST00000270176 CCDC88BA6NC98 1476 aa24.01■■□□□ 1.43
SCYL1-201ENST00000270176 TOP2AP11388 1531 aaKnown RBP24.01■■□□□ 1.43
SCYL1-201ENST00000270176 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
SCYL1-201ENST00000270176 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
SCYL1-201ENST00000270176 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
SCYL1-201ENST00000270176 ZEB1P37275 1124 aaPredicted RBP23.85■■□□□ 1.41
SCYL1-201ENST00000270176 SOGA1O94964 1423 aa23.65■■□□□ 1.38
SCYL1-201ENST00000270176 ATAD2BQ9ULI0 1458 aa23.65■■□□□ 1.38
SCYL1-201ENST00000270176 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
SCYL1-201ENST00000270176 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.37
SCYL1-201ENST00000270176 PEG3Q9GZU2 1588 aa23.57■■□□□ 1.36
SCYL1-201ENST00000270176 TTBK1Q5TCY1 1321 aaPredicted RBP23.55■■□□□ 1.36
SCYL1-201ENST00000270176 WRNQ14191 1432 aaPredicted RBP eCLIP23.48■■□□□ 1.35
SCYL1-201ENST00000270176 UBTFP17480 764 aaKnown RBP23.44■■□□□ 1.34
SCYL1-201ENST00000270176 CSRNP3Q8WYN3 585 aa23.44■■□□□ 1.34
SCYL1-201ENST00000270176 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
SCYL1-201ENST00000270176 CEP162Q5TB80 1403 aa23.33■■□□□ 1.33
SCYL1-201ENST00000270176 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
SCYL1-201ENST00000270176 TNIKQ9UKE5 1360 aa23.23■■□□□ 1.31
SCYL1-201ENST00000270176 EEA1Q15075 1411 aa23.21■■□□□ 1.31
SCYL1-201ENST00000270176 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
SCYL1-201ENST00000270176 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
SCYL1-201ENST00000270176 CCER1Q8TC90 406 aaPredicted RBP23.15■■□□□ 1.3
SCYL1-201ENST00000270176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.15■■□□□ 1.3
SCYL1-201ENST00000270176 SCAF1Q9H7N4 1312 aaKnown RBP23.1■■□□□ 1.29
SCYL1-201ENST00000270176 HMGXB3Q12766 1538 aa23.08■■□□□ 1.28
SCYL1-201ENST00000270176 PELP1Q8IZL8 1130 aaKnown RBP23.07■■□□□ 1.28
SCYL1-201ENST00000270176 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
SCYL1-201ENST00000270176 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
SCYL1-201ENST00000270176 TOP2BQ02880 1626 aa23.02■■□□□ 1.28
SCYL1-201ENST00000270176 CUX1P39880 1505 aa22.96■■□□□ 1.27
SCYL1-201ENST00000270176 CLIP1P30622 1438 aa22.96■■□□□ 1.27
SCYL1-201ENST00000270176 KIF21BO75037 1637 aa22.95■■□□□ 1.26
SCYL1-201ENST00000270176 CFTRP13569 1480 aa22.92■■□□□ 1.26
SCYL1-201ENST00000270176 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
SCYL1-201ENST00000270176 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
SCYL1-201ENST00000270176 DIEXFQ68CQ4 756 aaKnown RBP22.85■■□□□ 1.25
SCYL1-201ENST00000270176 ACIN1Q9UKV3 1341 aaKnown RBP22.84■■□□□ 1.25
SCYL1-201ENST00000270176 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
SCYL1-201ENST00000270176 CADPSQ9ULU8 1353 aa22.78■■□□□ 1.24
SCYL1-201ENST00000270176 APLP2Q06481 763 aa22.76■■□□□ 1.23
SCYL1-201ENST00000270176 VPS8Q8N3P4 1428 aa22.76■■□□□ 1.23
SCYL1-201ENST00000270176 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
SCYL1-201ENST00000270176 NEUROD1Q13562 356 aa22.75■■□□□ 1.23
SCYL1-201ENST00000270176 PRXQ9BXM0 1461 aa22.74■■□□□ 1.23
SCYL1-201ENST00000270176 CENPBP07199 599 aaPredicted RBP22.72■■□□□ 1.23
SCYL1-201ENST00000270176 CUX2O14529 1486 aa22.68■■□□□ 1.22
SCYL1-201ENST00000270176 DNAJC5BQ9UF47 199 aa22.68■■□□□ 1.22
SCYL1-201ENST00000270176 NESP48681 1621 aa22.65■■□□□ 1.22
SCYL1-201ENST00000270176 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
SCYL1-201ENST00000270176 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
SCYL1-201ENST00000270176 ZNF316A6NFI3 1004 aaPredicted RBP22.61■■□□□ 1.21
SCYL1-201ENST00000270176 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
SCYL1-201ENST00000270176 KANK4Q5T7N3 995 aaPredicted RBP22.6■■□□□ 1.21
SCYL1-201ENST00000270176 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
SCYL1-201ENST00000270176 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.21
SCYL1-201ENST00000270176 IGF1RP08069 1367 aa22.58■■□□□ 1.2
SCYL1-201ENST00000270176 GTF3C3Q9Y5Q9 886 aa22.57■■□□□ 1.2
SCYL1-201ENST00000270176 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
SCYL1-201ENST00000270176 P3H3Q8IVL6 736 aa22.49■■□□□ 1.19
SCYL1-201ENST00000270176 CARMIL1Q5VZK9 1371 aa22.49■■□□□ 1.19
SCYL1-201ENST00000270176 ARHGAP35Q9NRY4 1499 aa22.47■■□□□ 1.19
SCYL1-201ENST00000270176 ITGAEP38570 1179 aa22.39■■□□□ 1.18
SCYL1-201ENST00000270176 ATP1B4Q9UN42 357 aaPredicted RBP22.39■■□□□ 1.17
SCYL1-201ENST00000270176 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
SCYL1-201ENST00000270176 POLA1P09884 1462 aaPredicted RBP22.38■■□□□ 1.17
SCYL1-201ENST00000270176 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
SCYL1-201ENST00000270176 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
SCYL1-201ENST00000270176 TDRD9Q8NDG6 1382 aaKnown RBP22.3■■□□□ 1.16
SCYL1-201ENST00000270176 URB2Q14146 1524 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms