RNA–Protein interactions for RNA: ENST00000613513.1

GTF2I-213, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-213ENST00000613513 NISCHQ9Y2I1 1504 aa48.28■■■■■ 5.32
GTF2I-213ENST00000613513 CCDC180Q9P1Z9 1646 aa43.11■■■■■ 4.49
GTF2I-213ENST00000613513 ABCC9O60706 1549 aa42.71■■■■■ 4.43
GTF2I-213ENST00000613513 RB1CC1Q8TDY2 1594 aa40.92■■■■■ 4.14
GTF2I-213ENST00000613513 NACADO15069 1562 aa40.78■■■■■ 4.12
GTF2I-213ENST00000613513 DCAF8L2P0C7V8 631 aa40.66■■■■■ 4.1
GTF2I-213ENST00000613513 MYO15BQ96JP2 1530 aa40.42■■■■■ 4.06
GTF2I-213ENST00000613513 ZCCHC6Q5VYS8 1495 aaKnown RBP40.06■■■■■ 4
GTF2I-213ENST00000613513 DCAF1Q9Y4B6 1507 aa40.01■■■■□ 3.99
GTF2I-213ENST00000613513 PABPN1Q86U42 306 aaKnown RBP eCLIP39.88■■■■□ 3.97
GTF2I-213ENST00000613513 DNAJC5BQ9UF47 199 aa39.73■■■■□ 3.95
GTF2I-213ENST00000613513 UNC13AQ9UPW8 1703 aa39.72■■■■□ 3.95
GTF2I-213ENST00000613513 BICRAQ9NZM4 1560 aa39.57■■■■□ 3.92
GTF2I-213ENST00000613513 SHROOM4Q9ULL8 1493 aa39.35■■■■□ 3.89
GTF2I-213ENST00000613513 SCRIBQ14160 1630 aa39.2■■■■□ 3.87
GTF2I-213ENST00000613513 EIF4G1Q04637 1599 aaKnown RBP38.64■■■■□ 3.78
GTF2I-213ENST00000613513 CC2D2AQ9P2K1 1620 aa38.59■■■■□ 3.77
GTF2I-213ENST00000613513 CECR2Q9BXF3 1484 aa38.52■■■■□ 3.76
GTF2I-213ENST00000613513 NCAPD3P42695 1498 aa37.67■■■■□ 3.62
GTF2I-213ENST00000613513 ATAD2BQ9ULI0 1458 aa37.53■■■■□ 3.6
GTF2I-213ENST00000613513 SMARCA4P51532 1647 aa37.5■■■■□ 3.59
GTF2I-213ENST00000613513 SMARCA2P51531 1590 aa37.5■■■■□ 3.59
GTF2I-213ENST00000613513 BAZ1AQ9NRL2 1556 aaPredicted RBP37.48■■■■□ 3.59
GTF2I-213ENST00000613513 HMGXB3Q12766 1538 aa37.35■■■■□ 3.57
GTF2I-213ENST00000613513 PEG3Q9GZU2 1588 aa37.22■■■■□ 3.55
GTF2I-213ENST00000613513 BAZ1BQ9UIG0 1483 aaKnown RBP37.2■■■■□ 3.54
GTF2I-213ENST00000613513 MROH2BQ7Z745 1585 aa37.12■■■■□ 3.53
GTF2I-213ENST00000613513 ERCC6Q03468 1493 aa36.95■■■■□ 3.51
GTF2I-213ENST00000613513 CUX2O14529 1486 aa36.8■■■■□ 3.48
GTF2I-213ENST00000613513 NESP48681 1621 aa36.74■■■■□ 3.47
GTF2I-213ENST00000613513 LAMC3Q9Y6N6 1575 aa36.7■■■■□ 3.46
GTF2I-213ENST00000613513 WIZO95785 1651 aa36.62■■■■□ 3.45
GTF2I-213ENST00000613513 RSF1Q96T23 1441 aaPredicted RBP36.59■■■■□ 3.45
GTF2I-213ENST00000613513 PDS5BQ9NTI5 1447 aa36.59■■■■□ 3.45
GTF2I-213ENST00000613513 CADPSQ9ULU8 1353 aa36.56■■■■□ 3.44
GTF2I-213ENST00000613513 DNAJC5Q9H3Z4 198 aa36.39■■■■□ 3.42
GTF2I-213ENST00000613513 TOP2AP11388 1531 aaKnown RBP36.31■■■■□ 3.4
GTF2I-213ENST00000613513 THOC2Q8NI27 1593 aaKnown RBP36.28■■■■□ 3.4
GTF2I-213ENST00000613513 KIF21AQ7Z4S6 1674 aa36.22■■■■□ 3.39
GTF2I-213ENST00000613513 CFTRP13569 1480 aa36.18■■■■□ 3.38
GTF2I-213ENST00000613513 MRC2Q9UBG0 1479 aa36.13■■■■□ 3.37
GTF2I-213ENST00000613513 CEP164Q9UPV0 1460 aa36.06■■■■□ 3.36
GTF2I-213ENST00000613513 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
GTF2I-213ENST00000613513 WDR62O43379 1518 aa35.98■■■■□ 3.35
GTF2I-213ENST00000613513 CCDC88BA6NC98 1476 aa35.92■■■■□ 3.34
GTF2I-213ENST00000613513 URB2Q14146 1524 aaKnown RBP35.65■■■■□ 3.3
GTF2I-213ENST00000613513 PRDM2Q13029 1718 aa35.65■■■■□ 3.3
GTF2I-213ENST00000613513 ABCC8Q09428 1581 aa35.52■■■■□ 3.28
GTF2I-213ENST00000613513 TOPBP1Q92547 1522 aa35.38■■■■□ 3.25
GTF2I-213ENST00000613513 IFT140Q96RY7 1462 aa35.38■■■■□ 3.25
GTF2I-213ENST00000613513 OSCARQ8IYS5 282 aa35.29■■■■□ 3.24
GTF2I-213ENST00000613513 DNMBPQ6XZF7 1577 aa35.29■■■■□ 3.24
GTF2I-213ENST00000613513 SUPT5HO00267 1087 aaKnown RBP35.26■■■■□ 3.24
GTF2I-213ENST00000613513 ZNF608Q9ULD9 1512 aaPredicted RBP35.13■■■■□ 3.21
GTF2I-213ENST00000613513 POLA1P09884 1462 aaPredicted RBP35.04■■■■□ 3.2
GTF2I-213ENST00000613513 TARBP1Q13395 1621 aaKnown RBP34.99■■■■□ 3.19
GTF2I-213ENST00000613513 SOGA1O94964 1423 aa34.98■■■■□ 3.19
GTF2I-213ENST00000613513 AQRO60306 1485 aaKnown RBP eCLIP34.93■■■■□ 3.182e-8■■■■■ 33.4
GTF2I-213ENST00000613513 EIF4G3O43432 1585 aaKnown RBP34.92■■■■□ 3.18
GTF2I-213ENST00000613513 CUX1P39880 1505 aa34.86■■■■□ 3.17
GTF2I-213ENST00000613513 FGD5Q6ZNL6 1462 aa34.86■■■■□ 3.17
GTF2I-213ENST00000613513 RAD54L2Q9Y4B4 1467 aa34.86■■■■□ 3.17
GTF2I-213ENST00000613513 TRIM41Q8WV44 630 aa34.84■■■■□ 3.17
GTF2I-213ENST00000613513 WDR97A6NE52 1622 aa34.81■■■■□ 3.16
GTF2I-213ENST00000613513 TDRD9Q8NDG6 1382 aaKnown RBP34.81■■■■□ 3.16
GTF2I-213ENST00000613513 FBLN2P98095 1184 aa34.72■■■■□ 3.15
GTF2I-213ENST00000613513 GRIN2BQ13224 1484 aa34.63■■■■□ 3.13
GTF2I-213ENST00000613513 CHMP7Q8WUX9 453 aaPredicted RBP34.6■■■■□ 3.13
GTF2I-213ENST00000613513 MAGI1Q96QZ7 1491 aaPredicted RBP34.59■■■■□ 3.13
GTF2I-213ENST00000613513 WRNQ14191 1432 aaPredicted RBP eCLIP34.58■■■■□ 3.13
GTF2I-213ENST00000613513 ABCA10Q8WWZ4 1543 aa34.56■■■■□ 3.12
GTF2I-213ENST00000613513 SNAPC4Q5SXM2 1469 aa34.56■■■■□ 3.12
GTF2I-213ENST00000613513 GAPVD1Q14C86 1478 aa34.54■■■■□ 3.12
GTF2I-213ENST00000613513 CHD1O14646 1710 aa34.53■■■■□ 3.12
GTF2I-213ENST00000613513 ARHGEF11O15085 1522 aa34.5■■■■□ 3.11
GTF2I-213ENST00000613513 RIMBP3CA6NJZ7 1639 aa34.5■■■■□ 3.11
GTF2I-213ENST00000613513 RIMBP3BA6NNM3 1639 aa34.5■■■■□ 3.11
GTF2I-213ENST00000613513 RIMBP3Q9UFD9 1639 aa34.5■■■■□ 3.11
GTF2I-213ENST00000613513 SYNJ2O15056 1496 aa34.46■■■■□ 3.11
GTF2I-213ENST00000613513 TOP2BQ02880 1626 aa34.44■■■■□ 3.1
GTF2I-213ENST00000613513 BIVM-ERCC5R4GMW8 1640 aa34.39■■■■□ 3.1
GTF2I-213ENST00000613513 SYNJ1O43426 1573 aa34.36■■■■□ 3.09
GTF2I-213ENST00000613513 ABCA5Q8WWZ7 1642 aa34.35■■■■□ 3.09
GTF2I-213ENST00000613513 CYB5RLQ6IPT4 315 aa34.34■■■■□ 3.09
GTF2I-213ENST00000613513 PBRM1Q86U86 1689 aa34.3■■■■□ 3.08
GTF2I-213ENST00000613513 CLASP1Q7Z460 1538 aa34.26■■■■□ 3.08
GTF2I-213ENST00000613513 ARAP1Q96P48 1450 aa34.16■■■■□ 3.06
GTF2I-213ENST00000613513 FHAD1B1AJZ9 1412 aa34.16■■■■□ 3.06
GTF2I-213ENST00000613513 ERICH3Q5RHP9 1530 aa34.15■■■■□ 3.06
GTF2I-213ENST00000613513 GRIN2AQ12879 1464 aa34.14■■■■□ 3.06
GTF2I-213ENST00000613513 ADAMTS12P58397 1594 aa34.07■■■■□ 3.05
GTF2I-213ENST00000613513 NUP160Q12769 1436 aa34.03■■■■□ 3.04
GTF2I-213ENST00000613513 KIF27Q86VH2 1401 aa33.93■■■■□ 3.02
GTF2I-213ENST00000613513 CEP170Q5SW79 1584 aa33.88■■■■□ 3.01
GTF2I-213ENST00000613513 TRHP20396 242 aaPredicted RBP33.85■■■■□ 3.01
GTF2I-213ENST00000613513 IGF1RP08069 1367 aa33.84■■■■□ 3.01
GTF2I-213ENST00000613513 JPH4Q96JJ6 628 aa33.78■■■■□ 3
GTF2I-213ENST00000613513 SHROOM2Q13796 1616 aa33.74■■■□□ 2.99
GTF2I-213ENST00000613513 PRG4Q92954 1404 aaPredicted RBP33.68■■■□□ 2.98
GTF2I-213ENST00000613513 CUL7Q14999 1698 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms