RNA–Protein interactions for RNA: ENST00000468428.1

RRBP1-207, Transcript of ribosome binding protein 1, humanhuman

TSL 2

Gene RRBP1, Length 2,200 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRBP1-207ENST00000468428 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
RRBP1-207ENST00000468428 CCDC180Q9P1Z9 1646 aa29.75■■■□□ 2.35
RRBP1-207ENST00000468428 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
RRBP1-207ENST00000468428 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
RRBP1-207ENST00000468428 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
RRBP1-207ENST00000468428 DCAF1Q9Y4B6 1507 aa28.72■■■□□ 2.19
RRBP1-207ENST00000468428 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
RRBP1-207ENST00000468428 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
RRBP1-207ENST00000468428 MYO15BQ96JP2 1530 aa27.95■■■□□ 2.06
RRBP1-207ENST00000468428 ABCC9O60706 1549 aa27.83■■■□□ 2.04
RRBP1-207ENST00000468428 SCRIBQ14160 1630 aa27.65■■■□□ 2.02
RRBP1-207ENST00000468428 RSF1Q96T23 1441 aaPredicted RBP27.48■■□□□ 1.99
RRBP1-207ENST00000468428 NACADO15069 1562 aa27.48■■□□□ 1.99
RRBP1-207ENST00000468428 RB1CC1Q8TDY2 1594 aa27.24■■□□□ 1.95
RRBP1-207ENST00000468428 HRCP23327 699 aa27.14■■□□□ 1.94
RRBP1-207ENST00000468428 LOC105371045A0A1W2PR82 267 aa27.07■■□□□ 1.92
RRBP1-207ENST00000468428 PCGF6Q9BYE7 350 aa27.03■■□□□ 1.92
RRBP1-207ENST00000468428 CECR2Q9BXF3 1484 aa27.02■■□□□ 1.92
RRBP1-207ENST00000468428 MROH2BQ7Z745 1585 aa26.98■■□□□ 1.91
RRBP1-207ENST00000468428 TRIM41Q8WV44 630 aa26.89■■□□□ 1.9
RRBP1-207ENST00000468428 WIZO95785 1651 aa26.81■■□□□ 1.88
RRBP1-207ENST00000468428 BAZ1AQ9NRL2 1556 aaPredicted RBP26.79■■□□□ 1.88
RRBP1-207ENST00000468428 TRIM26Q12899 539 aaPredicted RBP26.68■■□□□ 1.86
RRBP1-207ENST00000468428 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
RRBP1-207ENST00000468428 TOP2AP11388 1531 aaKnown RBP26.53■■□□□ 1.84
RRBP1-207ENST00000468428 SMARCA4P51532 1647 aa26.53■■□□□ 1.84
RRBP1-207ENST00000468428 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.83
RRBP1-207ENST00000468428 FAM9AQ8IZU1 332 aaPredicted RBP26.5■■□□□ 1.83
RRBP1-207ENST00000468428 PPARGC1BQ86YN6 1023 aaKnown RBP26.37■■□□□ 1.81
RRBP1-207ENST00000468428 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
RRBP1-207ENST00000468428 CCDC88BA6NC98 1476 aa26.31■■□□□ 1.8
RRBP1-207ENST00000468428 BICRAQ9NZM4 1560 aa26.2■■□□□ 1.79
RRBP1-207ENST00000468428 ZEB1P37275 1124 aaPredicted RBP26.17■■□□□ 1.78
RRBP1-207ENST00000468428 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
RRBP1-207ENST00000468428 EHMT2Q96KQ7 1210 aa26.14■■□□□ 1.78
RRBP1-207ENST00000468428 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
RRBP1-207ENST00000468428 EEA1Q15075 1411 aa25.99■■□□□ 1.75
RRBP1-207ENST00000468428 PABPN1Q86U42 306 aaKnown RBP eCLIP25.99■■□□□ 1.751e-9■■□□□ 13.8
RRBP1-207ENST00000468428 SOGA1O94964 1423 aa25.9■■□□□ 1.74
RRBP1-207ENST00000468428 WRNQ14191 1432 aaPredicted RBP eCLIP25.9■■□□□ 1.74
RRBP1-207ENST00000468428 TNIKQ9UKE5 1360 aa25.85■■□□□ 1.73
RRBP1-207ENST00000468428 CEP162Q5TB80 1403 aa25.84■■□□□ 1.73
RRBP1-207ENST00000468428 ATAD2BQ9ULI0 1458 aa25.83■■□□□ 1.72
RRBP1-207ENST00000468428 CSRNP3Q8WYN3 585 aa25.78■■□□□ 1.72
RRBP1-207ENST00000468428 BAZ1BQ9UIG0 1483 aaKnown RBP25.75■■□□□ 1.71
RRBP1-207ENST00000468428 RUSC2Q8N2Y8 1516 aa25.74■■□□□ 1.71
RRBP1-207ENST00000468428 GOLGA3Q08378 1498 aa25.73■■□□□ 1.71
RRBP1-207ENST00000468428 SYNJ1O43426 1573 aa25.68■■□□□ 1.7
RRBP1-207ENST00000468428 KIF21BO75037 1637 aa25.61■■□□□ 1.69
RRBP1-207ENST00000468428 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
RRBP1-207ENST00000468428 UBTFP17480 764 aaKnown RBP25.59■■□□□ 1.69
RRBP1-207ENST00000468428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.48■■□□□ 1.67
RRBP1-207ENST00000468428 CCER1Q8TC90 406 aaPredicted RBP25.48■■□□□ 1.67
RRBP1-207ENST00000468428 TOP2BQ02880 1626 aa25.45■■□□□ 1.66
RRBP1-207ENST00000468428 HMGXB3Q12766 1538 aa25.44■■□□□ 1.66
RRBP1-207ENST00000468428 NCAPD3P42695 1498 aa25.39■■□□□ 1.65
RRBP1-207ENST00000468428 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.65
RRBP1-207ENST00000468428 CLIP1P30622 1438 aa25.37■■□□□ 1.65
RRBP1-207ENST00000468428 TTBK1Q5TCY1 1321 aaPredicted RBP25.34■■□□□ 1.65
RRBP1-207ENST00000468428 RAPGEF2Q9Y4G8 1499 aa25.32■■□□□ 1.64
RRBP1-207ENST00000468428 VPS8Q8N3P4 1428 aa25.3■■□□□ 1.64
RRBP1-207ENST00000468428 ERICH3Q5RHP9 1530 aa25.23■■□□□ 1.63
RRBP1-207ENST00000468428 PRXQ9BXM0 1461 aa25.17■■□□□ 1.62
RRBP1-207ENST00000468428 CFTRP13569 1480 aa25.15■■□□□ 1.62
RRBP1-207ENST00000468428 CUX1P39880 1505 aa25.15■■□□□ 1.62
RRBP1-207ENST00000468428 APLP2Q06481 763 aa25.07■■□□□ 1.6
RRBP1-207ENST00000468428 KIF27Q86VH2 1401 aa25.05■■□□□ 1.6
RRBP1-207ENST00000468428 PRDM2Q13029 1718 aa25.01■■□□□ 1.59
RRBP1-207ENST00000468428 ARAP1Q96P48 1450 aa24.98■■□□□ 1.59
RRBP1-207ENST00000468428 DIEXFQ68CQ4 756 aaKnown RBP24.96■■□□□ 1.59
RRBP1-207ENST00000468428 HNRNPUL2Q1KMD3 747 aaKnown RBP24.93■■□□□ 1.58
RRBP1-207ENST00000468428 RANGAP1P46060 587 aaPredicted RBP24.9■■□□□ 1.58
RRBP1-207ENST00000468428 SCAF1Q9H7N4 1312 aaKnown RBP24.87■■□□□ 1.57
RRBP1-207ENST00000468428 ZNF316A6NFI3 1004 aaPredicted RBP24.84■■□□□ 1.57
RRBP1-207ENST00000468428 CADPSQ9ULU8 1353 aa24.84■■□□□ 1.57
RRBP1-207ENST00000468428 ARHGAP35Q9NRY4 1499 aa24.77■■□□□ 1.56
RRBP1-207ENST00000468428 CUX2O14529 1486 aa24.76■■□□□ 1.55
RRBP1-207ENST00000468428 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
RRBP1-207ENST00000468428 RRBP1Q9P2E9 1410 aaKnown RBP24.73■■□□□ 1.55
RRBP1-207ENST00000468428 IGF1RP08069 1367 aa24.72■■□□□ 1.55
RRBP1-207ENST00000468428 CLSPNQ9HAW4 1339 aa24.72■■□□□ 1.55
RRBP1-207ENST00000468428 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
RRBP1-207ENST00000468428 KANK4Q5T7N3 995 aaPredicted RBP24.7■■□□□ 1.54
RRBP1-207ENST00000468428 CENPBP07199 599 aaPredicted RBP24.67■■□□□ 1.54
RRBP1-207ENST00000468428 CC2D2AQ9P2K1 1620 aa24.67■■□□□ 1.54
RRBP1-207ENST00000468428 NEUROD1Q13562 356 aa24.64■■□□□ 1.54
RRBP1-207ENST00000468428 CARMIL1Q5VZK9 1371 aa24.62■■□□□ 1.53
RRBP1-207ENST00000468428 MAP3K1Q13233 1512 aa24.62■■□□□ 1.53
RRBP1-207ENST00000468428 DHX57Q6P158 1386 aaKnown RBP24.61■■□□□ 1.53
RRBP1-207ENST00000468428 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
RRBP1-207ENST00000468428 CCNB3Q8WWL7 1395 aa24.57■■□□□ 1.52
RRBP1-207ENST00000468428 TIAM1Q13009 1591 aa24.54■■□□□ 1.52
RRBP1-207ENST00000468428 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
RRBP1-207ENST00000468428 PELP1Q8IZL8 1130 aaKnown RBP24.49■■□□□ 1.51
RRBP1-207ENST00000468428 ABCA10Q8WWZ4 1543 aa24.48■■□□□ 1.51
RRBP1-207ENST00000468428 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
RRBP1-207ENST00000468428 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
RRBP1-207ENST00000468428 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
RRBP1-207ENST00000468428 LRRC9Q6ZRR7 1453 aa24.42■■□□□ 1.5
RRBP1-207ENST00000468428 CFAP43Q8NDM7 1665 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms