RNA–Protein interactions for RNA: ENST00000439524.2

SLC38A3-203, Transcript of solute carrier family 38 member 3, humanhuman

TSL 3

Gene SLC38A3, Length 424 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3-203ENST00000439524 NISCHQ9Y2I1 1504 aa29.44■■■□□ 2.3
SLC38A3-203ENST00000439524 ABCC9O60706 1549 aa26.68■■□□□ 1.86
SLC38A3-203ENST00000439524 CCDC180Q9P1Z9 1646 aa26.48■■□□□ 1.83
SLC38A3-203ENST00000439524 RB1CC1Q8TDY2 1594 aa25.26■■□□□ 1.63
SLC38A3-203ENST00000439524 DNAJC5BQ9UF47 199 aa25.15■■□□□ 1.62
SLC38A3-203ENST00000439524 NACADO15069 1562 aa25.02■■□□□ 1.6
SLC38A3-203ENST00000439524 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
SLC38A3-203ENST00000439524 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
SLC38A3-203ENST00000439524 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
SLC38A3-203ENST00000439524 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
SLC38A3-203ENST00000439524 BICRAQ9NZM4 1560 aa24.59■■□□□ 1.53
SLC38A3-203ENST00000439524 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
SLC38A3-203ENST00000439524 DCAF1Q9Y4B6 1507 aa24.44■■□□□ 1.5
SLC38A3-203ENST00000439524 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
SLC38A3-203ENST00000439524 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
SLC38A3-203ENST00000439524 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
SLC38A3-203ENST00000439524 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
SLC38A3-203ENST00000439524 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
SLC38A3-203ENST00000439524 DNAJC5Q9H3Z4 198 aa23.1■■□□□ 1.29
SLC38A3-203ENST00000439524 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
SLC38A3-203ENST00000439524 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
SLC38A3-203ENST00000439524 SMARCA4P51532 1647 aa23.02■■□□□ 1.28
SLC38A3-203ENST00000439524 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
SLC38A3-203ENST00000439524 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
SLC38A3-203ENST00000439524 CUX2O14529 1486 aa22.94■■□□□ 1.26
SLC38A3-203ENST00000439524 HMGXB3Q12766 1538 aa22.93■■□□□ 1.26
SLC38A3-203ENST00000439524 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
SLC38A3-203ENST00000439524 NESP48681 1621 aa22.9■■□□□ 1.26
SLC38A3-203ENST00000439524 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
SLC38A3-203ENST00000439524 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
SLC38A3-203ENST00000439524 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
SLC38A3-203ENST00000439524 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
SLC38A3-203ENST00000439524 LAMC3Q9Y6N6 1575 aa22.62■■□□□ 1.21
SLC38A3-203ENST00000439524 KIF21AQ7Z4S6 1674 aa22.62■■□□□ 1.21
SLC38A3-203ENST00000439524 WIZO95785 1651 aa22.49■■□□□ 1.19
SLC38A3-203ENST00000439524 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
SLC38A3-203ENST00000439524 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
SLC38A3-203ENST00000439524 MRC2Q9UBG0 1479 aa22.33■■□□□ 1.16
SLC38A3-203ENST00000439524 WDR62O43379 1518 aa22.28■■□□□ 1.16
SLC38A3-203ENST00000439524 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
SLC38A3-203ENST00000439524 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
SLC38A3-203ENST00000439524 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
SLC38A3-203ENST00000439524 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
SLC38A3-203ENST00000439524 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
SLC38A3-203ENST00000439524 CFTRP13569 1480 aa22.12■■□□□ 1.13
SLC38A3-203ENST00000439524 URB2Q14146 1524 aaKnown RBP22.04■■□□□ 1.12
SLC38A3-203ENST00000439524 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
SLC38A3-203ENST00000439524 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
SLC38A3-203ENST00000439524 OSCARQ8IYS5 282 aa21.87■■□□□ 1.09
SLC38A3-203ENST00000439524 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
SLC38A3-203ENST00000439524 TOPBP1Q92547 1522 aa21.75■■□□□ 1.07
SLC38A3-203ENST00000439524 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
SLC38A3-203ENST00000439524 RIMBP3CA6NJZ7 1639 aa21.7■■□□□ 1.06
SLC38A3-203ENST00000439524 RIMBP3BA6NNM3 1639 aa21.7■■□□□ 1.06
SLC38A3-203ENST00000439524 RIMBP3Q9UFD9 1639 aa21.7■■□□□ 1.06
SLC38A3-203ENST00000439524 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
SLC38A3-203ENST00000439524 EIF4G3O43432 1585 aaKnown RBP21.68■■□□□ 1.06
SLC38A3-203ENST00000439524 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
SLC38A3-203ENST00000439524 TARBP1Q13395 1621 aaKnown RBP21.59■■□□□ 1.05
SLC38A3-203ENST00000439524 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
SLC38A3-203ENST00000439524 CHD1O14646 1710 aa21.58■■□□□ 1.05
SLC38A3-203ENST00000439524 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.043e-6■■□□□ 13.8
SLC38A3-203ENST00000439524 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
SLC38A3-203ENST00000439524 RAD54L2Q9Y4B4 1467 aa21.49■■□□□ 1.03
SLC38A3-203ENST00000439524 FBLN2P98095 1184 aa21.46■■□□□ 1.03
SLC38A3-203ENST00000439524 CYB5RLQ6IPT4 315 aa21.43■■□□□ 1.02
SLC38A3-203ENST00000439524 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
SLC38A3-203ENST00000439524 SOGA1O94964 1423 aa21.4■■□□□ 1.02
SLC38A3-203ENST00000439524 WDR97A6NE52 1622 aa21.39■■□□□ 1.01
SLC38A3-203ENST00000439524 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.01
SLC38A3-203ENST00000439524 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
SLC38A3-203ENST00000439524 CUX1P39880 1505 aa21.36■■□□□ 1.01
SLC38A3-203ENST00000439524 SNAPC4Q5SXM2 1469 aa21.35■■□□□ 1.01
SLC38A3-203ENST00000439524 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
SLC38A3-203ENST00000439524 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
SLC38A3-203ENST00000439524 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
SLC38A3-203ENST00000439524 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
SLC38A3-203ENST00000439524 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
SLC38A3-203ENST00000439524 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
SLC38A3-203ENST00000439524 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
SLC38A3-203ENST00000439524 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
SLC38A3-203ENST00000439524 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
SLC38A3-203ENST00000439524 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.98
SLC38A3-203ENST00000439524 ABCA5Q8WWZ7 1642 aa21.12■□□□□ 0.97
SLC38A3-203ENST00000439524 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
SLC38A3-203ENST00000439524 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
SLC38A3-203ENST00000439524 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
SLC38A3-203ENST00000439524 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
SLC38A3-203ENST00000439524 ERCC6L2Q5T890 1561 aa21■□□□□ 0.95
SLC38A3-203ENST00000439524 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
SLC38A3-203ENST00000439524 GRIN2AQ12879 1464 aa20.97■□□□□ 0.95
SLC38A3-203ENST00000439524 CEP170Q5SW79 1584 aa20.95■□□□□ 0.94
SLC38A3-203ENST00000439524 NUP160Q12769 1436 aa20.88■□□□□ 0.93
SLC38A3-203ENST00000439524 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
SLC38A3-203ENST00000439524 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
SLC38A3-203ENST00000439524 SHROOM2Q13796 1616 aa20.84■□□□□ 0.93
SLC38A3-203ENST00000439524 PRG4Q92954 1404 aaPredicted RBP20.71■□□□□ 0.91
SLC38A3-203ENST00000439524 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
SLC38A3-203ENST00000439524 KIF13AQ9H1H9 1805 aa20.69■□□□□ 0.9
SLC38A3-203ENST00000439524 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms