Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 EIF4A2-219ENST00000485101 5327 ntTSL 54.14□□□□□ -1.752e-9■■■■□ 23
XRN2Q9H0D6 EIF4A2-220ENST00000486805 590 ntTSL 23.97□□□□□ -1.772e-9■■■■□ 23
XRN2Q9H0D6 PCGF3-204ENST00000427463 582 ntTSL 325.41■■□□□ 1.662e-6■■■■□ 23
XRN2Q9H0D6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.192e-6■■■■□ 23
XRN2Q9H0D6 PCGF3-203ENST00000419774 589 ntTSL 520.81■□□□□ 0.922e-6■■■■□ 23
XRN2Q9H0D6 PCGF3-211ENST00000484141 566 ntTSL 220.05■□□□□ 0.82e-6■■■■□ 23
XRN2Q9H0D6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.392e-6■■■■□ 23
XRN2Q9H0D6 PCGF3-205ENST00000430644 2621 ntTSL 216.43■□□□□ 0.222e-6■■■■□ 23
XRN2Q9H0D6 PCGF3-207ENST00000440452 3609 ntTSL 212.03□□□□□ -0.482e-6■■■■□ 23
XRN2Q9H0D6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.591e-6■■■■□ 23
XRN2Q9H0D6 ANKRD11-204ENST00000378332 1982 ntTSL 222.49■■□□□ 1.191e-6■■■■□ 23
XRN2Q9H0D6 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.291e-6■■■■□ 23
XRN2Q9H0D6 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.291e-6■■■■□ 23
XRN2Q9H0D6 MIDN-202ENST00000586757 1163 ntAPPRIS ALT2 TSL 528.88■■■□□ 2.214e-7■■■■□ 23
XRN2Q9H0D6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.128e-9■■■■□ 23
XRN2Q9H0D6 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.198e-9■■■■□ 23
XRN2Q9H0D6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.248e-9■■■■□ 23
XRN2Q9H0D6 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.468e-9■■■■□ 23
XRN2Q9H0D6 PPP6R2-206ENST00000427222 1811 ntTSL 519.22■□□□□ 0.678e-9■■■■□ 23
XRN2Q9H0D6 PPP6R2-205ENST00000401672 2199 ntTSL 213.77□□□□□ -0.218e-9■■■■□ 23
XRN2Q9H0D6 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.538e-9■■■■□ 23
XRN2Q9H0D6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.071e-6■■■■□ 23
XRN2Q9H0D6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.081e-6■■■■□ 23
XRN2Q9H0D6 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.151e-6■■■■□ 23
XRN2Q9H0D6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.41■■□□□ 1.023e-6■■■■□ 23
XRN2Q9H0D6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.893e-6■■■■□ 23
XRN2Q9H0D6 PMPCA-204ENST00000444897 2316 ntTSL 215.9■□□□□ 0.143e-6■■■■□ 23
XRN2Q9H0D6 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.595e-7■■■■□ 23
XRN2Q9H0D6 SH3BP2-213ENST00000508385 876 ntTSL 317.69■□□□□ 0.421e-6■■■■□ 23
XRN2Q9H0D6 SH3BP2-208ENST00000504294 557 ntTSL 516.77■□□□□ 0.281e-6■■■■□ 23
XRN2Q9H0D6 KPNB1-205ENST00000577918 859 ntTSL 318.04■□□□□ 0.482e-6■■■■□ 23
XRN2Q9H0D6 KPNB1-214ENST00000583648 896 ntTSL 417.5■□□□□ 0.392e-6■■■■□ 23
XRN2Q9H0D6 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.792e-6■■■■□ 23
XRN2Q9H0D6 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC8.7□□□□□ -1.022e-6■■■■□ 23
XRN2Q9H0D6 KPNB1-204ENST00000577875 605 ntTSL 35.92□□□□□ -1.462e-6■■■■□ 23
XRN2Q9H0D6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.447e-7■■■■□ 23
XRN2Q9H0D6 SF1-211ENST00000448404 2778 ntTSL 1 (best)14.79□□□□□ -0.047e-7■■■■□ 23
XRN2Q9H0D6 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.7□□□□□ -0.227e-7■■■■□ 23
XRN2Q9H0D6 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.247e-7■■■■□ 23
XRN2Q9H0D6 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.57□□□□□ -0.247e-7■■■■□ 23
XRN2Q9H0D6 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.567e-7■■■■□ 23
XRN2Q9H0D6 MKNK2-203ENST00000585667 870 ntTSL 526.83■■□□□ 1.896e-7■■■■□ 23
XRN2Q9H0D6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.15■□□□□ 0.981e-7■■■■□ 22.9
XRN2Q9H0D6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.483e-6■■■■□ 22.9
XRN2Q9H0D6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.393e-6■■■■□ 22.9
XRN2Q9H0D6 ACTN4-207ENST00000495553 586 ntTSL 510.8□□□□□ -0.684e-8■■■■□ 22.9
XRN2Q9H0D6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.016e-9■■■■□ 22.9
XRN2Q9H0D6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.036e-9■■■■□ 22.9
XRN2Q9H0D6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.126e-9■■■■□ 22.9
XRN2Q9H0D6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.312e-6■■■■□ 22.9
XRN2Q9H0D6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.852e-6■■■■□ 22.9
XRN2Q9H0D6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.16■■□□□ 1.782e-6■■■■□ 22.9
XRN2Q9H0D6 TSPAN4-219ENST00000530404 818 ntTSL 525.31■■□□□ 1.642e-6■■■■□ 22.9
XRN2Q9H0D6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.522e-6■■■■□ 22.9
XRN2Q9H0D6 TSPAN4-215ENST00000525334 860 ntTSL 321.85■■□□□ 1.092e-6■■■■□ 22.9
XRN2Q9H0D6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.49■□□□□ 0.076e-6■■■■□ 22.9
XRN2Q9H0D6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.026e-6■■■■□ 22.9
XRN2Q9H0D6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.27□□□□□ -0.136e-6■■■■□ 22.9
XRN2Q9H0D6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.29■■■□□ 2.448e-8■■■■□ 22.9
XRN2Q9H0D6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.98■■■□□ 2.078e-8■■■■□ 22.9
XRN2Q9H0D6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.048e-8■■■■□ 22.9
XRN2Q9H0D6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.48■■□□□ 1.998e-8■■■■□ 22.9
XRN2Q9H0D6 AL136531.2-201ENST00000618770 1164 ntTSL 221.71■■□□□ 1.078e-8■■■■□ 22.9
XRN2Q9H0D6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.598e-8■■■■□ 22.9
XRN2Q9H0D6 FKBP1A-209ENST00000612074 409 ntTSL 214.78□□□□□ -0.048e-8■■■■□ 22.9
XRN2Q9H0D6 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC14.56□□□□□ -0.088e-8■■■■□ 22.9
XRN2Q9H0D6 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.448e-8■■■■□ 22.9
XRN2Q9H0D6 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC9.76□□□□□ -0.858e-8■■■■□ 22.9
XRN2Q9H0D6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.392e-7■■■■□ 22.9
XRN2Q9H0D6 RAB40C-209ENST00000565511 783 ntTSL 328.72■■■□□ 2.192e-10■■■■□ 22.8
XRN2Q9H0D6 CHRD-215ENST00000485883 568 ntTSL 424.82■■□□□ 1.562e-10■■■■□ 22.8
XRN2Q9H0D6 RAB40C-207ENST00000563109 710 ntTSL 321.39■■□□□ 1.012e-10■■■■□ 22.8
XRN2Q9H0D6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.66■□□□□ 0.96e-6■■■■□ 22.8
XRN2Q9H0D6 RAB40C-202ENST00000509637 565 ntTSL 319.57■□□□□ 0.722e-10■■■■□ 22.8
XRN2Q9H0D6 EIF6-205ENST00000440766 798 ntTSL 219.55■□□□□ 0.729e-6■■■■□ 22.8
XRN2Q9H0D6 MSL2-203ENST00000473093 543 ntTSL 418.16■□□□□ 0.59e-6■■■■□ 22.8
XRN2Q9H0D6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.352e-10■■■■□ 22.8
XRN2Q9H0D6 EIF4B-210ENST00000550704 1476 ntTSL 516.81■□□□□ 0.282e-24■■■■□ 22.8
XRN2Q9H0D6 NUMB-225ENST00000557031 567 ntTSL 415.77■□□□□ 0.122e-10■■■■□ 22.8
XRN2Q9H0D6 EIF4B-205ENST00000549481 1097 ntTSL 515.52■□□□□ 0.082e-24■■■■□ 22.8
XRN2Q9H0D6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.5■□□□□ 0.072e-10■■■■□ 22.8
XRN2Q9H0D6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.072e-10■■■■□ 22.8
XRN2Q9H0D6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.026e-6■■■■□ 22.8
XRN2Q9H0D6 ATG2A-202ENST00000418259 5654 ntTSL 514.83□□□□□ -0.046e-6■■■■□ 22.8
XRN2Q9H0D6 EIF2AK4-210ENST00000560855 4789 ntTSL 513.4□□□□□ -0.262e-10■■■■□ 22.8
XRN2Q9H0D6 OGFRP1-201ENST00000332965 1242 ntTSL 1 (best) BASIC13.32□□□□□ -0.283e-7■■■■□ 22.8
XRN2Q9H0D6 EIF4B-203ENST00000420463 1936 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.32e-24■■■■□ 22.8
XRN2Q9H0D6 OGFRP1-203ENST00000446578 551 ntTSL 4 BASIC12.25□□□□□ -0.453e-7■■■■□ 22.8
XRN2Q9H0D6 EIF4B-202ENST00000416762 1985 ntTSL 2 BASIC12.01□□□□□ -0.492e-24■■■■□ 22.8
XRN2Q9H0D6 EIF4B-212ENST00000551527 769 ntTSL 410.69□□□□□ -0.72e-24■■■■□ 22.8
XRN2Q9H0D6 EIF4B-207ENST00000549645 590 ntTSL 410.53□□□□□ -0.722e-24■■■■□ 22.8
XRN2Q9H0D6 EIF4B-204ENST00000549077 885 ntTSL 510.53□□□□□ -0.722e-24■■■■□ 22.8
XRN2Q9H0D6 EIF4B-209ENST00000550390 871 ntTSL 510.26□□□□□ -0.772e-24■■■■□ 22.8
XRN2Q9H0D6 EIF4B-213ENST00000552490 841 ntTSL 29.93□□□□□ -0.822e-24■■■■□ 22.8
XRN2Q9H0D6 PLCB1-217ENST00000628900 560 ntTSL 49.83□□□□□ -0.842e-10■■■■□ 22.8
XRN2Q9H0D6 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.062e-24■■■■□ 22.8
XRN2Q9H0D6 OGFRP1-202ENST00000415205 475 ntTSL 38.12□□□□□ -1.113e-7■■■■□ 22.8
XRN2Q9H0D6 PLCB1-215ENST00000626966 2996 ntTSL 27.59□□□□□ -1.22e-10■■■■□ 22.8
XRN2Q9H0D6 EIF2AK4-207ENST00000559311 535 ntTSL 47.3□□□□□ -1.242e-10■■■■□ 22.8
XRN2Q9H0D6 MSL2-205ENST00000491050 559 ntTSL 46.93□□□□□ -1.39e-6■■■■□ 22.8
Retrieved 100 of 21,068 protein–RNA pairs in 143.6 ms