RNA–Protein interactions for RNA: ENST00000550390.1

EIF4B-209, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 5

Gene EIF4B, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-209ENST00000550390 NISCHQ9Y2I1 1504 aa21.02■□□□□ 0.96
EIF4B-209ENST00000550390 ABCC9O60706 1549 aa19.5■□□□□ 0.71
EIF4B-209ENST00000550390 CCDC180Q9P1Z9 1646 aa19.13■□□□□ 0.65
EIF4B-209ENST00000550390 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
EIF4B-209ENST00000550390 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
EIF4B-209ENST00000550390 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
EIF4B-209ENST00000550390 NACADO15069 1562 aa18.08■□□□□ 0.49
EIF4B-209ENST00000550390 PABPN1Q86U42 306 aaKnown RBP eCLIP18.01■□□□□ 0.47
EIF4B-209ENST00000550390 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
EIF4B-209ENST00000550390 DCAF8L2P0C7V8 631 aa17.82■□□□□ 0.44
EIF4B-209ENST00000550390 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
EIF4B-209ENST00000550390 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
EIF4B-209ENST00000550390 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
EIF4B-209ENST00000550390 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
EIF4B-209ENST00000550390 EIF4G1Q04637 1599 aaKnown RBP17.46■□□□□ 0.39
EIF4B-209ENST00000550390 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
EIF4B-209ENST00000550390 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
EIF4B-209ENST00000550390 DCAF1Q9Y4B6 1507 aa17.3■□□□□ 0.36
EIF4B-209ENST00000550390 DNAJC5Q9H3Z4 198 aa17.29■□□□□ 0.36
EIF4B-209ENST00000550390 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
EIF4B-209ENST00000550390 CUX2O14529 1486 aa16.92■□□□□ 0.3
EIF4B-209ENST00000550390 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
EIF4B-209ENST00000550390 NESP48681 1621 aa16.66■□□□□ 0.26
EIF4B-209ENST00000550390 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
EIF4B-209ENST00000550390 THOC2Q8NI27 1593 aaKnown RBP16.63■□□□□ 0.25
EIF4B-209ENST00000550390 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
EIF4B-209ENST00000550390 HMGXB3Q12766 1538 aa16.58■□□□□ 0.24
EIF4B-209ENST00000550390 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
EIF4B-209ENST00000550390 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
EIF4B-209ENST00000550390 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
EIF4B-209ENST00000550390 CHIC1Q5VXU3 224 aa16.46■□□□□ 0.23
EIF4B-209ENST00000550390 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
EIF4B-209ENST00000550390 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
EIF4B-209ENST00000550390 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
EIF4B-209ENST00000550390 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
EIF4B-209ENST00000550390 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
EIF4B-209ENST00000550390 PDS5BQ9NTI5 1447 aa16.25■□□□□ 0.19
EIF4B-209ENST00000550390 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
EIF4B-209ENST00000550390 WDR62O43379 1518 aa16.23■□□□□ 0.19
EIF4B-209ENST00000550390 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
EIF4B-209ENST00000550390 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
EIF4B-209ENST00000550390 WIZO95785 1651 aa16.08■□□□□ 0.17
EIF4B-209ENST00000550390 CEP164Q9UPV0 1460 aa16.08■□□□□ 0.16
EIF4B-209ENST00000550390 RIMBP3CA6NJZ7 1639 aa16.02■□□□□ 0.16
EIF4B-209ENST00000550390 RIMBP3BA6NNM3 1639 aa16.02■□□□□ 0.16
EIF4B-209ENST00000550390 RIMBP3Q9UFD9 1639 aa16.02■□□□□ 0.16
EIF4B-209ENST00000550390 FANCD2Q9BXW9 1451 aa16.01■□□□□ 0.15
EIF4B-209ENST00000550390 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
EIF4B-209ENST00000550390 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
EIF4B-209ENST00000550390 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
EIF4B-209ENST00000550390 CFTRP13569 1480 aa15.88■□□□□ 0.13
EIF4B-209ENST00000550390 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
EIF4B-209ENST00000550390 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
EIF4B-209ENST00000550390 CHD1O14646 1710 aa15.8■□□□□ 0.12
EIF4B-209ENST00000550390 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
EIF4B-209ENST00000550390 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
EIF4B-209ENST00000550390 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
EIF4B-209ENST00000550390 ARAP1Q96P48 1450 aa15.71■□□□□ 0.1
EIF4B-209ENST00000550390 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
EIF4B-209ENST00000550390 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
EIF4B-209ENST00000550390 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
EIF4B-209ENST00000550390 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
EIF4B-209ENST00000550390 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
EIF4B-209ENST00000550390 DNMBPQ6XZF7 1577 aa15.61■□□□□ 0.09
EIF4B-209ENST00000550390 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.087e-7■■■■■ 30.5
EIF4B-209ENST00000550390 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
EIF4B-209ENST00000550390 ABCC8Q09428 1581 aa15.5■□□□□ 0.07
EIF4B-209ENST00000550390 CLASP1Q7Z460 1538 aa15.5■□□□□ 0.07
EIF4B-209ENST00000550390 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
EIF4B-209ENST00000550390 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
EIF4B-209ENST00000550390 FBLN2P98095 1184 aa15.49■□□□□ 0.07
EIF4B-209ENST00000550390 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
EIF4B-209ENST00000550390 RAD54L2Q9Y4B4 1467 aa15.45■□□□□ 0.06
EIF4B-209ENST00000550390 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
EIF4B-209ENST00000550390 TDRD9Q8NDG6 1382 aaKnown RBP15.38■□□□□ 0.05
EIF4B-209ENST00000550390 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
EIF4B-209ENST00000550390 WDR97A6NE52 1622 aa15.37■□□□□ 0.05
EIF4B-209ENST00000550390 FGD5Q6ZNL6 1462 aa15.34■□□□□ 0.05
EIF4B-209ENST00000550390 SOGA1O94964 1423 aa15.34■□□□□ 0.05
EIF4B-209ENST00000550390 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.05
EIF4B-209ENST00000550390 GAPVD1Q14C86 1478 aa15.3■□□□□ 0.04
EIF4B-209ENST00000550390 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
EIF4B-209ENST00000550390 CUX1P39880 1505 aa15.28■□□□□ 0.04
EIF4B-209ENST00000550390 GRIN2BQ13224 1484 aa15.28■□□□□ 0.04
EIF4B-209ENST00000550390 ERCC6L2Q5T890 1561 aa15.28■□□□□ 0.04
EIF4B-209ENST00000550390 CHMP7Q8WUX9 453 aaPredicted RBP15.27■□□□□ 0.04
EIF4B-209ENST00000550390 KIF13AQ9H1H9 1805 aa15.24■□□□□ 0.03
EIF4B-209ENST00000550390 ABCA5Q8WWZ7 1642 aa15.22■□□□□ 0.03
EIF4B-209ENST00000550390 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
EIF4B-209ENST00000550390 ADAMTS12P58397 1594 aa15.14■□□□□ 0.01
EIF4B-209ENST00000550390 SHROOM2Q13796 1616 aa15.12■□□□□ 0.01
EIF4B-209ENST00000550390 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
EIF4B-209ENST00000550390 ABCA10Q8WWZ4 1543 aa15.11■□□□□ 0.01
EIF4B-209ENST00000550390 NUP160Q12769 1436 aa15.07■□□□□ 0
EIF4B-209ENST00000550390 DIP2BQ9P265 1576 aa14.99□□□□□ -0.01
EIF4B-209ENST00000550390 TSPOAP1O95153 1857 aa14.99□□□□□ -0.01
EIF4B-209ENST00000550390 BIVM-ERCC5R4GMW8 1640 aa14.97□□□□□ -0.01
EIF4B-209ENST00000550390 KDM6BO15054 1643 aa14.96□□□□□ -0.01
EIF4B-209ENST00000550390 RUSC2Q8N2Y8 1516 aa14.95□□□□□ -0.02
EIF4B-209ENST00000550390 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms