RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 NISCHQ9Y2I1 1504 aa52.59■■■■■ 6.01
PCGF3-204ENST00000427463 CCDC180Q9P1Z9 1646 aa47.18■■■■■ 5.14
PCGF3-204ENST00000427463 ABCC9O60706 1549 aa46.83■■■■■ 5.09
PCGF3-204ENST00000427463 RB1CC1Q8TDY2 1594 aa44.73■■■■■ 4.75
PCGF3-204ENST00000427463 NACADO15069 1562 aa44.48■■■■■ 4.71
PCGF3-204ENST00000427463 DCAF8L2P0C7V8 631 aa44.12■■■■■ 4.65
PCGF3-204ENST00000427463 MYO15BQ96JP2 1530 aa43.96■■■■■ 4.63
PCGF3-204ENST00000427463 UNC13AQ9UPW8 1703 aa43.85■■■■■ 4.61
PCGF3-204ENST00000427463 DNAJC5BQ9UF47 199 aa43.67■■■■■ 4.58
PCGF3-204ENST00000427463 ZCCHC6Q5VYS8 1495 aaKnown RBP43.66■■■■■ 4.58
PCGF3-204ENST00000427463 PABPN1Q86U42 306 aaKnown RBP eCLIP43.57■■■■■ 4.57
PCGF3-204ENST00000427463 DCAF1Q9Y4B6 1507 aa43.48■■■■■ 4.55
PCGF3-204ENST00000427463 BICRAQ9NZM4 1560 aa43.46■■■■■ 4.55
PCGF3-204ENST00000427463 SCRIBQ14160 1630 aa42.96■■■■■ 4.47
PCGF3-204ENST00000427463 SHROOM4Q9ULL8 1493 aa42.87■■■■■ 4.45
PCGF3-204ENST00000427463 CC2D2AQ9P2K1 1620 aa42.38■■■■■ 4.37
PCGF3-204ENST00000427463 EIF4G1Q04637 1599 aaKnown RBP42.35■■■■■ 4.37
PCGF3-204ENST00000427463 CECR2Q9BXF3 1484 aa42.16■■■■■ 4.34
PCGF3-204ENST00000427463 NCAPD3P42695 1498 aa41.02■■■■■ 4.16
PCGF3-204ENST00000427463 SMARCA4P51532 1647 aa41.02■■■■■ 4.16
PCGF3-204ENST00000427463 ATAD2BQ9ULI0 1458 aa40.94■■■■■ 4.14
PCGF3-204ENST00000427463 SMARCA2P51531 1590 aa40.86■■■■■ 4.13
PCGF3-204ENST00000427463 BAZ1AQ9NRL2 1556 aaPredicted RBP40.82■■■■■ 4.12
PCGF3-204ENST00000427463 HMGXB3Q12766 1538 aa40.8■■■■■ 4.12
PCGF3-204ENST00000427463 PEG3Q9GZU2 1588 aa40.62■■■■■ 4.09
PCGF3-204ENST00000427463 BAZ1BQ9UIG0 1483 aaKnown RBP40.56■■■■■ 4.08
PCGF3-204ENST00000427463 MROH2BQ7Z745 1585 aa40.53■■■■■ 4.08
PCGF3-204ENST00000427463 ERCC6Q03468 1493 aa40.4■■■■■ 4.06
PCGF3-204ENST00000427463 NESP48681 1621 aa40.32■■■■■ 4.05
PCGF3-204ENST00000427463 CUX2O14529 1486 aa40.29■■■■■ 4.04
PCGF3-204ENST00000427463 LAMC3Q9Y6N6 1575 aa40.11■■■■■ 4.01
PCGF3-204ENST00000427463 WIZO95785 1651 aa40.09■■■■■ 4.01
PCGF3-204ENST00000427463 THOC2Q8NI27 1593 aaKnown RBP39.93■■■■□ 3.98
PCGF3-204ENST00000427463 DNAJC5Q9H3Z4 198 aa39.92■■■■□ 3.98
PCGF3-204ENST00000427463 KIF21AQ7Z4S6 1674 aa39.89■■■■□ 3.98
PCGF3-204ENST00000427463 PDS5BQ9NTI5 1447 aa39.8■■■■□ 3.96
PCGF3-204ENST00000427463 CADPSQ9ULU8 1353 aa39.76■■■■□ 3.96
PCGF3-204ENST00000427463 RSF1Q96T23 1441 aaPredicted RBP39.74■■■■□ 3.95
PCGF3-204ENST00000427463 TOP2AP11388 1531 aaKnown RBP39.59■■■■□ 3.93
PCGF3-204ENST00000427463 MRC2Q9UBG0 1479 aa39.48■■■■□ 3.91
PCGF3-204ENST00000427463 WDR62O43379 1518 aa39.41■■■■□ 3.9
PCGF3-204ENST00000427463 CFTRP13569 1480 aa39.4■■■■□ 3.9
PCGF3-204ENST00000427463 CEP164Q9UPV0 1460 aa39.37■■■■□ 3.89
PCGF3-204ENST00000427463 FANCD2Q9BXW9 1451 aa39.34■■■■□ 3.89
PCGF3-204ENST00000427463 PRDM2Q13029 1718 aa39.18■■■■□ 3.86
PCGF3-204ENST00000427463 CCDC88BA6NC98 1476 aa39.09■■■■□ 3.85
PCGF3-204ENST00000427463 URB2Q14146 1524 aaKnown RBP39.03■■■■□ 3.84
PCGF3-204ENST00000427463 TOPBP1Q92547 1522 aa38.64■■■■□ 3.78
PCGF3-204ENST00000427463 IFT140Q96RY7 1462 aa38.56■■■■□ 3.76
PCGF3-204ENST00000427463 ABCC8Q09428 1581 aa38.55■■■■□ 3.76
PCGF3-204ENST00000427463 DNMBPQ6XZF7 1577 aa38.54■■■■□ 3.76
PCGF3-204ENST00000427463 ZNF608Q9ULD9 1512 aaPredicted RBP38.49■■■■□ 3.75
PCGF3-204ENST00000427463 OSCARQ8IYS5 282 aa38.39■■■■□ 3.74
PCGF3-204ENST00000427463 EIF4G3O43432 1585 aaKnown RBP38.36■■■■□ 3.73
PCGF3-204ENST00000427463 TARBP1Q13395 1621 aaKnown RBP38.33■■■■□ 3.73
PCGF3-204ENST00000427463 POLA1P09884 1462 aaPredicted RBP38.26■■■■□ 3.72
PCGF3-204ENST00000427463 TRIM41Q8WV44 630 aa38.23■■■■□ 3.71
PCGF3-204ENST00000427463 AQRO60306 1485 aaKnown RBP eCLIP38.14■■■■□ 3.72e-11■■■■■ 34.7
PCGF3-204ENST00000427463 RAD54L2Q9Y4B4 1467 aa38.09■■■■□ 3.69
PCGF3-204ENST00000427463 CUX1P39880 1505 aa38.07■■■■□ 3.69
PCGF3-204ENST00000427463 SUPT5HO00267 1087 aaKnown RBP38.06■■■■□ 3.68
PCGF3-204ENST00000427463 CHD1O14646 1710 aa38.06■■■■□ 3.68
PCGF3-204ENST00000427463 FGD5Q6ZNL6 1462 aa38.05■■■■□ 3.68
PCGF3-204ENST00000427463 SOGA1O94964 1423 aa38.04■■■■□ 3.68
PCGF3-204ENST00000427463 RIMBP3CA6NJZ7 1639 aa38■■■■□ 3.67
PCGF3-204ENST00000427463 RIMBP3BA6NNM3 1639 aa38■■■■□ 3.67
PCGF3-204ENST00000427463 RIMBP3Q9UFD9 1639 aa38■■■■□ 3.67
PCGF3-204ENST00000427463 WDR97A6NE52 1622 aa37.95■■■■□ 3.67
PCGF3-204ENST00000427463 TDRD9Q8NDG6 1382 aaKnown RBP37.93■■■■□ 3.66
PCGF3-204ENST00000427463 ARHGEF11O15085 1522 aa37.87■■■■□ 3.65
PCGF3-204ENST00000427463 SNAPC4Q5SXM2 1469 aa37.79■■■■□ 3.64
PCGF3-204ENST00000427463 FBLN2P98095 1184 aa37.76■■■■□ 3.64
PCGF3-204ENST00000427463 MAGI1Q96QZ7 1491 aaPredicted RBP37.71■■■■□ 3.63
PCGF3-204ENST00000427463 GRIN2BQ13224 1484 aa37.71■■■■□ 3.63
PCGF3-204ENST00000427463 PBRM1Q86U86 1689 aa37.69■■■■□ 3.62
PCGF3-204ENST00000427463 ABCA10Q8WWZ4 1543 aa37.64■■■■□ 3.62
PCGF3-204ENST00000427463 ABCA5Q8WWZ7 1642 aa37.62■■■■□ 3.61
PCGF3-204ENST00000427463 GAPVD1Q14C86 1478 aa37.61■■■■□ 3.61
PCGF3-204ENST00000427463 BIVM-ERCC5R4GMW8 1640 aa37.58■■■■□ 3.61
PCGF3-204ENST00000427463 CLASP1Q7Z460 1538 aa37.58■■■■□ 3.61
PCGF3-204ENST00000427463 SYNJ2O15056 1496 aa37.57■■■■□ 3.6
PCGF3-204ENST00000427463 SYNJ1O43426 1573 aa37.55■■■■□ 3.6
PCGF3-204ENST00000427463 TOP2BQ02880 1626 aa37.55■■■■□ 3.6
PCGF3-204ENST00000427463 CHMP7Q8WUX9 453 aaPredicted RBP37.54■■■■□ 3.6
PCGF3-204ENST00000427463 ARAP1Q96P48 1450 aa37.52■■■■□ 3.6
PCGF3-204ENST00000427463 WRNQ14191 1432 aaPredicted RBP eCLIP37.49■■■■□ 3.596e-6■■■■■ 35.2
PCGF3-204ENST00000427463 CYB5RLQ6IPT4 315 aa37.48■■■■□ 3.59
PCGF3-204ENST00000427463 ADAMTS12P58397 1594 aa37.31■■■■□ 3.56
PCGF3-204ENST00000427463 GRIN2AQ12879 1464 aa37.25■■■■□ 3.55
PCGF3-204ENST00000427463 ERICH3Q5RHP9 1530 aa37.18■■■■□ 3.54
PCGF3-204ENST00000427463 CEP170Q5SW79 1584 aa37.14■■■■□ 3.54
PCGF3-204ENST00000427463 FHAD1B1AJZ9 1412 aa37.14■■■■□ 3.54
PCGF3-204ENST00000427463 NUP160Q12769 1436 aa37.11■■■■□ 3.53
PCGF3-204ENST00000427463 ERCC6L2Q5T890 1561 aa37■■■■□ 3.51
PCGF3-204ENST00000427463 SHROOM2Q13796 1616 aa36.99■■■■□ 3.51
PCGF3-204ENST00000427463 TRHP20396 242 aaPredicted RBP36.95■■■■□ 3.51
PCGF3-204ENST00000427463 RUSC2Q8N2Y8 1516 aa36.79■■■■□ 3.48
PCGF3-204ENST00000427463 KIF27Q86VH2 1401 aa36.75■■■■□ 3.47
PCGF3-204ENST00000427463 CUL7Q14999 1698 aa36.73■■■■□ 3.47
PCGF3-204ENST00000427463 PRG4Q92954 1404 aaPredicted RBP36.69■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms