RNA–Protein interactions for RNA: ENST00000399219.7

PMPCA-203, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2 BASIC

Gene PMPCA, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-203ENST00000399219 NISCHQ9Y2I1 1504 aa45.49■■■■■ 4.87
PMPCA-203ENST00000399219 CCDC180Q9P1Z9 1646 aa39.25■■■■□ 3.87
PMPCA-203ENST00000399219 ZCCHC6Q5VYS8 1495 aaKnown RBP38.38■■■■□ 3.73
PMPCA-203ENST00000399219 DCAF1Q9Y4B6 1507 aa37.67■■■■□ 3.62
PMPCA-203ENST00000399219 SHROOM4Q9ULL8 1493 aa37.6■■■■□ 3.61
PMPCA-203ENST00000399219 DCAF8L2P0C7V8 631 aa37.3■■■■□ 3.56
PMPCA-203ENST00000399219 MYO15BQ96JP2 1530 aa36.95■■■■□ 3.51
PMPCA-203ENST00000399219 SUPT5HO00267 1087 aaKnown RBP36.62■■■■□ 3.45
PMPCA-203ENST00000399219 NACADO15069 1562 aa36.43■■■■□ 3.42
PMPCA-203ENST00000399219 ABCC9O60706 1549 aa36.42■■■■□ 3.42
PMPCA-203ENST00000399219 SCRIBQ14160 1630 aa36.18■■■■□ 3.38
PMPCA-203ENST00000399219 RB1CC1Q8TDY2 1594 aa35.9■■■■□ 3.34
PMPCA-203ENST00000399219 RSF1Q96T23 1441 aaPredicted RBP35.62■■■■□ 3.29
PMPCA-203ENST00000399219 CHIC1Q5VXU3 224 aa35.51■■■■□ 3.27
PMPCA-203ENST00000399219 CECR2Q9BXF3 1484 aa35.26■■■■□ 3.24
PMPCA-203ENST00000399219 MROH2BQ7Z745 1585 aa35.15■■■■□ 3.22
PMPCA-203ENST00000399219 UNC13AQ9UPW8 1703 aa35.08■■■■□ 3.21
PMPCA-203ENST00000399219 BAZ1AQ9NRL2 1556 aaPredicted RBP35.07■■■■□ 3.2
PMPCA-203ENST00000399219 WIZO95785 1651 aa34.86■■■■□ 3.17
PMPCA-203ENST00000399219 BICRAQ9NZM4 1560 aa34.78■■■■□ 3.16
PMPCA-203ENST00000399219 SMARCA4P51532 1647 aa34.76■■■■□ 3.16
PMPCA-203ENST00000399219 TOP2AP11388 1531 aaKnown RBP34.57■■■■□ 3.12
PMPCA-203ENST00000399219 PABPN1Q86U42 306 aaKnown RBP eCLIP34.53■■■■□ 3.125e-10■■■■□ 23.2
PMPCA-203ENST00000399219 TRIM41Q8WV44 630 aa34.43■■■■□ 3.1
PMPCA-203ENST00000399219 PEG3Q9GZU2 1588 aa34.36■■■■□ 3.09
PMPCA-203ENST00000399219 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
PMPCA-203ENST00000399219 CCDC88BA6NC98 1476 aa34.25■■■■□ 3.07
PMPCA-203ENST00000399219 SMARCA2P51531 1590 aa34.25■■■■□ 3.07
PMPCA-203ENST00000399219 LOC105371045A0A1W2PR82 267 aa34.14■■■■□ 3.06
PMPCA-203ENST00000399219 ATAD2BQ9ULI0 1458 aa34.05■■■■□ 3.04
PMPCA-203ENST00000399219 BAZ1BQ9UIG0 1483 aaKnown RBP33.89■■■■□ 3.02
PMPCA-203ENST00000399219 FAM9AQ8IZU1 332 aaPredicted RBP33.74■■■□□ 2.99
PMPCA-203ENST00000399219 ABCC8Q09428 1581 aa33.72■■■□□ 2.99
PMPCA-203ENST00000399219 NCAPD3P42695 1498 aa33.66■■■□□ 2.98
PMPCA-203ENST00000399219 HMGXB3Q12766 1538 aa33.64■■■□□ 2.98
PMPCA-203ENST00000399219 WRNQ14191 1432 aaPredicted RBP eCLIP33.5■■■□□ 2.95
PMPCA-203ENST00000399219 EEA1Q15075 1411 aa33.49■■■□□ 2.95
PMPCA-203ENST00000399219 PCGF6Q9BYE7 350 aa33.43■■■□□ 2.94
PMPCA-203ENST00000399219 SOGA1O94964 1423 aa33.31■■■□□ 2.92
PMPCA-203ENST00000399219 TRIM26Q12899 539 aaPredicted RBP33.29■■■□□ 2.92
PMPCA-203ENST00000399219 SYNJ1O43426 1573 aa33.26■■■□□ 2.92
PMPCA-203ENST00000399219 CSRNP3Q8WYN3 585 aa33.21■■■□□ 2.91
PMPCA-203ENST00000399219 EHMT2Q96KQ7 1210 aa33.18■■■□□ 2.9
PMPCA-203ENST00000399219 HRCP23327 699 aa33.16■■■□□ 2.9
PMPCA-203ENST00000399219 CFTRP13569 1480 aa33.12■■■□□ 2.89
PMPCA-203ENST00000399219 TOP2BQ02880 1626 aa33.1■■■□□ 2.89
PMPCA-203ENST00000399219 RUSC2Q8N2Y8 1516 aa33.1■■■□□ 2.89
PMPCA-203ENST00000399219 TNIKQ9UKE5 1360 aa33.09■■■□□ 2.89
PMPCA-203ENST00000399219 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
PMPCA-203ENST00000399219 GOLGA3Q08378 1498 aa33.01■■■□□ 2.87
PMPCA-203ENST00000399219 CC2D2AQ9P2K1 1620 aa32.97■■■□□ 2.87
PMPCA-203ENST00000399219 CEP164Q9UPV0 1460 aa32.94■■■□□ 2.86
PMPCA-203ENST00000399219 CEP162Q5TB80 1403 aa32.93■■■□□ 2.86
PMPCA-203ENST00000399219 KIF21BO75037 1637 aa32.93■■■□□ 2.86
PMPCA-203ENST00000399219 CADPSQ9ULU8 1353 aa32.85■■■□□ 2.85
PMPCA-203ENST00000399219 PRDM2Q13029 1718 aa32.84■■■□□ 2.85
PMPCA-203ENST00000399219 UBTFP17480 764 aaKnown RBP32.83■■■□□ 2.85
PMPCA-203ENST00000399219 CUX1P39880 1505 aa32.82■■■□□ 2.84
PMPCA-203ENST00000399219 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
PMPCA-203ENST00000399219 ERICH3Q5RHP9 1530 aa32.59■■■□□ 2.81
PMPCA-203ENST00000399219 RAPGEF2Q9Y4G8 1499 aa32.59■■■□□ 2.81
PMPCA-203ENST00000399219 PRXQ9BXM0 1461 aa32.58■■■□□ 2.81
PMPCA-203ENST00000399219 CLIP1P30622 1438 aa32.51■■■□□ 2.79
PMPCA-203ENST00000399219 FANCD2Q9BXW9 1451 aa32.45■■■□□ 2.79
PMPCA-203ENST00000399219 ZEB1P37275 1124 aaPredicted RBP32.43■■■□□ 2.78
PMPCA-203ENST00000399219 PPARGC1BQ86YN6 1023 aaKnown RBP32.41■■■□□ 2.78
PMPCA-203ENST00000399219 VPS8Q8N3P4 1428 aa32.35■■■□□ 2.77
PMPCA-203ENST00000399219 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
PMPCA-203ENST00000399219 LAMC3Q9Y6N6 1575 aa32.33■■■□□ 2.77
PMPCA-203ENST00000399219 CUX2O14529 1486 aa32.29■■■□□ 2.76
PMPCA-203ENST00000399219 DNMBPQ6XZF7 1577 aa32.29■■■□□ 2.76
PMPCA-203ENST00000399219 IGF1RP08069 1367 aa32.24■■■□□ 2.75
PMPCA-203ENST00000399219 NESP48681 1621 aa32.21■■■□□ 2.75
PMPCA-203ENST00000399219 TOPBP1Q92547 1522 aa32.17■■■□□ 2.74
PMPCA-203ENST00000399219 ABCA10Q8WWZ4 1543 aa32.11■■■□□ 2.73
PMPCA-203ENST00000399219 PDS5BQ9NTI5 1447 aa32.11■■■□□ 2.73
PMPCA-203ENST00000399219 POLA1P09884 1462 aaPredicted RBP32.09■■■□□ 2.73
PMPCA-203ENST00000399219 CARMIL1Q5VZK9 1371 aa32.08■■■□□ 2.73
PMPCA-203ENST00000399219 APLP2Q06481 763 aa32.07■■■□□ 2.72
PMPCA-203ENST00000399219 ARAP1Q96P48 1450 aa32.05■■■□□ 2.72
PMPCA-203ENST00000399219 TTBK1Q5TCY1 1321 aaPredicted RBP31.98■■■□□ 2.71
PMPCA-203ENST00000399219 URB2Q14146 1524 aaKnown RBP31.98■■■□□ 2.71
PMPCA-203ENST00000399219 RANGAP1P46060 587 aaPredicted RBP31.98■■■□□ 2.71
PMPCA-203ENST00000399219 RAD54L2Q9Y4B4 1467 aa31.96■■■□□ 2.71
PMPCA-203ENST00000399219 ARHGAP35Q9NRY4 1499 aa31.93■■■□□ 2.7
PMPCA-203ENST00000399219 DNAJC5BQ9UF47 199 aa31.9■■■□□ 2.7
PMPCA-203ENST00000399219 CUL7Q14999 1698 aa31.85■■■□□ 2.69
PMPCA-203ENST00000399219 WDR97A6NE52 1622 aa31.84■■■□□ 2.69
PMPCA-203ENST00000399219 CCER1Q8TC90 406 aaPredicted RBP31.81■■■□□ 2.68
PMPCA-203ENST00000399219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.79■■■□□ 2.68
PMPCA-203ENST00000399219 KIF21AQ7Z4S6 1674 aa31.76■■■□□ 2.68
PMPCA-203ENST00000399219 ABCA5Q8WWZ7 1642 aa31.73■■■□□ 2.67
PMPCA-203ENST00000399219 MAP3K1Q13233 1512 aa31.68■■■□□ 2.66
PMPCA-203ENST00000399219 GAPVD1Q14C86 1478 aa31.67■■■□□ 2.66
PMPCA-203ENST00000399219 FHAD1B1AJZ9 1412 aa31.63■■■□□ 2.65
PMPCA-203ENST00000399219 EFCAB5A4FU69 1503 aa31.62■■■□□ 2.65
PMPCA-203ENST00000399219 TDRD9Q8NDG6 1382 aaKnown RBP31.61■■■□□ 2.65
PMPCA-203ENST00000399219 TARBP1Q13395 1621 aaKnown RBP31.61■■■□□ 2.65
PMPCA-203ENST00000399219 MRC2Q9UBG0 1479 aa31.61■■■□□ 2.65
PMPCA-203ENST00000399219 KANK4Q5T7N3 995 aaPredicted RBP31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms