RNA–Protein interactions for RNA: ENST00000444897.2

PMPCA-204, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-204ENST00000444897 NISCHQ9Y2I1 1504 aa32.95■■■□□ 2.86
PMPCA-204ENST00000444897 SHROOM4Q9ULL8 1493 aa28.32■■■□□ 2.12
PMPCA-204ENST00000444897 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.07
PMPCA-204ENST00000444897 SUPT5HO00267 1087 aaKnown RBP27.93■■■□□ 2.06
PMPCA-204ENST00000444897 CCDC180Q9P1Z9 1646 aa27.87■■■□□ 2.05
PMPCA-204ENST00000444897 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
PMPCA-204ENST00000444897 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
PMPCA-204ENST00000444897 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
PMPCA-204ENST00000444897 HRCP23327 699 aa27.13■■□□□ 1.93
PMPCA-204ENST00000444897 DCAF1Q9Y4B6 1507 aa27.05■■□□□ 1.92
PMPCA-204ENST00000444897 PCGF6Q9BYE7 350 aa26.84■■□□□ 1.89
PMPCA-204ENST00000444897 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
PMPCA-204ENST00000444897 PPARGC1BQ86YN6 1023 aaKnown RBP26.47■■□□□ 1.83
PMPCA-204ENST00000444897 ABCC9O60706 1549 aa26.46■■□□□ 1.83
PMPCA-204ENST00000444897 TRIM26Q12899 539 aaPredicted RBP26.28■■□□□ 1.8
PMPCA-204ENST00000444897 RSF1Q96T23 1441 aaPredicted RBP26.2■■□□□ 1.78
PMPCA-204ENST00000444897 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
PMPCA-204ENST00000444897 TRIM41Q8WV44 630 aa26■■□□□ 1.75
PMPCA-204ENST00000444897 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
PMPCA-204ENST00000444897 ZEB1P37275 1124 aaPredicted RBP25.89■■□□□ 1.74
PMPCA-204ENST00000444897 FAM9AQ8IZU1 332 aaPredicted RBP25.8■■□□□ 1.72
PMPCA-204ENST00000444897 NACADO15069 1562 aa25.67■■□□□ 1.7
PMPCA-204ENST00000444897 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
PMPCA-204ENST00000444897 MROH2BQ7Z745 1585 aa25.63■■□□□ 1.69
PMPCA-204ENST00000444897 EHMT2Q96KQ7 1210 aa25.55■■□□□ 1.68
PMPCA-204ENST00000444897 WIZO95785 1651 aa25.52■■□□□ 1.68
PMPCA-204ENST00000444897 BAZ1AQ9NRL2 1556 aaPredicted RBP25.42■■□□□ 1.66
PMPCA-204ENST00000444897 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
PMPCA-204ENST00000444897 SCAF1Q9H7N4 1312 aaKnown RBP25.2■■□□□ 1.62
PMPCA-204ENST00000444897 PELP1Q8IZL8 1130 aaKnown RBP25.15■■□□□ 1.62
PMPCA-204ENST00000444897 TOP2AP11388 1531 aaKnown RBP25.14■■□□□ 1.61
PMPCA-204ENST00000444897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.14■■□□□ 1.61
PMPCA-204ENST00000444897 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
PMPCA-204ENST00000444897 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
PMPCA-204ENST00000444897 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
PMPCA-204ENST00000444897 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
PMPCA-204ENST00000444897 SMARCA4P51532 1647 aa25.03■■□□□ 1.6
PMPCA-204ENST00000444897 SMARCA2P51531 1590 aa25.01■■□□□ 1.59
PMPCA-204ENST00000444897 CEP162Q5TB80 1403 aa24.97■■□□□ 1.59
PMPCA-204ENST00000444897 TNIKQ9UKE5 1360 aa24.91■■□□□ 1.58
PMPCA-204ENST00000444897 SOGA1O94964 1423 aa24.9■■□□□ 1.58
PMPCA-204ENST00000444897 EEA1Q15075 1411 aa24.87■■□□□ 1.57
PMPCA-204ENST00000444897 ACIN1Q9UKV3 1341 aaKnown RBP24.86■■□□□ 1.57
PMPCA-204ENST00000444897 TTBK1Q5TCY1 1321 aaPredicted RBP24.83■■□□□ 1.57
PMPCA-204ENST00000444897 DIEXFQ68CQ4 756 aaKnown RBP24.82■■□□□ 1.56
PMPCA-204ENST00000444897 UNC13AQ9UPW8 1703 aa24.82■■□□□ 1.56
PMPCA-204ENST00000444897 CSRNP3Q8WYN3 585 aa24.79■■□□□ 1.56
PMPCA-204ENST00000444897 NEUROD1Q13562 356 aa24.78■■□□□ 1.56
PMPCA-204ENST00000444897 RUSC2Q8N2Y8 1516 aa24.75■■□□□ 1.55
PMPCA-204ENST00000444897 UBTFP17480 764 aaKnown RBP24.72■■□□□ 1.55
PMPCA-204ENST00000444897 GOLGA3Q08378 1498 aa24.72■■□□□ 1.55
PMPCA-204ENST00000444897 CENPBP07199 599 aaPredicted RBP24.69■■□□□ 1.54
PMPCA-204ENST00000444897 GTF3C3Q9Y5Q9 886 aa24.57■■□□□ 1.52
PMPCA-204ENST00000444897 ZNF316A6NFI3 1004 aaPredicted RBP24.56■■□□□ 1.52
PMPCA-204ENST00000444897 CEP164Q9UPV0 1460 aa24.54■■□□□ 1.52
PMPCA-204ENST00000444897 PEG3Q9GZU2 1588 aa24.53■■□□□ 1.52
PMPCA-204ENST00000444897 KIF21BO75037 1637 aa24.52■■□□□ 1.52
PMPCA-204ENST00000444897 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
PMPCA-204ENST00000444897 BICRAQ9NZM4 1560 aa24.48■■□□□ 1.51
PMPCA-204ENST00000444897 CLIP1P30622 1438 aa24.44■■□□□ 1.5
PMPCA-204ENST00000444897 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.55e-10■■■■□ 23.2
PMPCA-204ENST00000444897 HNRNPUL2Q1KMD3 747 aaKnown RBP24.38■■□□□ 1.49
PMPCA-204ENST00000444897 VPS8Q8N3P4 1428 aa24.38■■□□□ 1.49
PMPCA-204ENST00000444897 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
PMPCA-204ENST00000444897 ATAD2BQ9ULI0 1458 aa24.29■■□□□ 1.48
PMPCA-204ENST00000444897 RAPGEF2Q9Y4G8 1499 aa24.28■■□□□ 1.48
PMPCA-204ENST00000444897 APLP2Q06481 763 aa24.27■■□□□ 1.48
PMPCA-204ENST00000444897 YTHDC1Q96MU7 727 aaKnown RBP24.24■■□□□ 1.47
PMPCA-204ENST00000444897 MIER1Q8N108 512 aa24.23■■□□□ 1.47
PMPCA-204ENST00000444897 TOP2BQ02880 1626 aa24.16■■□□□ 1.46
PMPCA-204ENST00000444897 RANGAP1P46060 587 aaPredicted RBP24.11■■□□□ 1.45
PMPCA-204ENST00000444897 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.45
PMPCA-204ENST00000444897 ERICH3Q5RHP9 1530 aa24.06■■□□□ 1.44
PMPCA-204ENST00000444897 CLSPNQ9HAW4 1339 aa24.04■■□□□ 1.44
PMPCA-204ENST00000444897 PRXQ9BXM0 1461 aa24.01■■□□□ 1.43
PMPCA-204ENST00000444897 ARAP1Q96P48 1450 aa24■■□□□ 1.43
PMPCA-204ENST00000444897 DHX57Q6P158 1386 aaKnown RBP23.99■■□□□ 1.43
PMPCA-204ENST00000444897 MYT1Q01538 1121 aa23.98■■□□□ 1.43
PMPCA-204ENST00000444897 KANK4Q5T7N3 995 aaPredicted RBP23.89■■□□□ 1.41
PMPCA-204ENST00000444897 RRBP1Q9P2E9 1410 aaKnown RBP23.87■■□□□ 1.41
PMPCA-204ENST00000444897 CUX1P39880 1505 aa23.84■■□□□ 1.41
PMPCA-204ENST00000444897 KIF27Q86VH2 1401 aa23.82■■□□□ 1.4
PMPCA-204ENST00000444897 CUX2O14529 1486 aa23.8■■□□□ 1.4
PMPCA-204ENST00000444897 HMGXB3Q12766 1538 aa23.8■■□□□ 1.4
PMPCA-204ENST00000444897 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
PMPCA-204ENST00000444897 CCNB3Q8WWL7 1395 aa23.74■■□□□ 1.39
PMPCA-204ENST00000444897 ARHGAP35Q9NRY4 1499 aa23.73■■□□□ 1.39
PMPCA-204ENST00000444897 CFTRP13569 1480 aa23.66■■□□□ 1.38
PMPCA-204ENST00000444897 SUPT16HQ9Y5B9 1047 aaKnown RBP23.6■■□□□ 1.37
PMPCA-204ENST00000444897 ITGAEP38570 1179 aa23.59■■□□□ 1.37
PMPCA-204ENST00000444897 RAB3GAP2Q9H2M9 1393 aa23.56■■□□□ 1.36
PMPCA-204ENST00000444897 TIAM1Q13009 1591 aa23.56■■□□□ 1.36
PMPCA-204ENST00000444897 MAP3K1Q13233 1512 aa23.56■■□□□ 1.36
PMPCA-204ENST00000444897 MAPKBP1O60336 1514 aa23.54■■□□□ 1.36
PMPCA-204ENST00000444897 PRDM2Q13029 1718 aa23.52■■□□□ 1.36
PMPCA-204ENST00000444897 IGF1RP08069 1367 aa23.51■■□□□ 1.35
PMPCA-204ENST00000444897 SETD5Q9C0A6 1442 aa23.47■■□□□ 1.35
PMPCA-204ENST00000444897 LRRC9Q6ZRR7 1453 aa23.46■■□□□ 1.35
PMPCA-204ENST00000444897 CARMIL1Q5VZK9 1371 aa23.43■■□□□ 1.34
PMPCA-204ENST00000444897 PHLDB1Q86UU1 1377 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms