RNA–Protein interactions for RNA: ENST00000430644.5

PCGF3-205, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 2,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-205ENST00000430644 NISCHQ9Y2I1 1504 aa33.5■■■□□ 2.95
PCGF3-205ENST00000430644 SHROOM4Q9ULL8 1493 aa29.53■■■□□ 2.32
PCGF3-205ENST00000430644 HRCP23327 699 aa29.47■■■□□ 2.31
PCGF3-205ENST00000430644 SUPT5HO00267 1087 aaKnown RBP29.36■■■□□ 2.29
PCGF3-205ENST00000430644 MYO15BQ96JP2 1530 aa29.02■■■□□ 2.24
PCGF3-205ENST00000430644 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
PCGF3-205ENST00000430644 PCGF6Q9BYE7 350 aa28.96■■■□□ 2.23
PCGF3-205ENST00000430644 PPARGC1BQ86YN6 1023 aaKnown RBP28.9■■■□□ 2.22
PCGF3-205ENST00000430644 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
PCGF3-205ENST00000430644 ZCCHC6Q5VYS8 1495 aaKnown RBP28.49■■■□□ 2.15
PCGF3-205ENST00000430644 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
PCGF3-205ENST00000430644 LOC105371045A0A1W2PR82 267 aa28.19■■■□□ 2.1
PCGF3-205ENST00000430644 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
PCGF3-205ENST00000430644 PELP1Q8IZL8 1130 aaKnown RBP28.08■■■□□ 2.09
PCGF3-205ENST00000430644 TRIM26Q12899 539 aaPredicted RBP28.06■■■□□ 2.08
PCGF3-205ENST00000430644 ABCC9O60706 1549 aa27.92■■■□□ 2.06
PCGF3-205ENST00000430644 SCAF1Q9H7N4 1312 aaKnown RBP27.8■■■□□ 2.04
PCGF3-205ENST00000430644 ZEB1P37275 1124 aaPredicted RBP27.74■■■□□ 2.03
PCGF3-205ENST00000430644 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
PCGF3-205ENST00000430644 ACIN1Q9UKV3 1341 aaKnown RBP27.15■■□□□ 1.94
PCGF3-205ENST00000430644 FAM9AQ8IZU1 332 aaPredicted RBP27.15■■□□□ 1.94
PCGF3-205ENST00000430644 NEUROD1Q13562 356 aa27.1■■□□□ 1.93
PCGF3-205ENST00000430644 NACADO15069 1562 aa27.1■■□□□ 1.93
PCGF3-205ENST00000430644 EHMT2Q96KQ7 1210 aa27.02■■□□□ 1.92
PCGF3-205ENST00000430644 SCRIBQ14160 1630 aa27■■□□□ 1.91
PCGF3-205ENST00000430644 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
PCGF3-205ENST00000430644 RB1CC1Q8TDY2 1594 aa26.93■■□□□ 1.9
PCGF3-205ENST00000430644 GTF3C3Q9Y5Q9 886 aa26.92■■□□□ 1.9
PCGF3-205ENST00000430644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.9■■□□□ 1.9
PCGF3-205ENST00000430644 MYT1Q01538 1121 aa26.89■■□□□ 1.9
PCGF3-205ENST00000430644 CCER1Q8TC90 406 aaPredicted RBP26.82■■□□□ 1.88
PCGF3-205ENST00000430644 CENPBP07199 599 aaPredicted RBP26.78■■□□□ 1.88
PCGF3-205ENST00000430644 DIEXFQ68CQ4 756 aaKnown RBP26.78■■□□□ 1.88
PCGF3-205ENST00000430644 UNC13AQ9UPW8 1703 aa26.49■■□□□ 1.83
PCGF3-205ENST00000430644 PABPN1Q86U42 306 aaKnown RBP eCLIP26.47■■□□□ 1.83
PCGF3-205ENST00000430644 TTBK1Q5TCY1 1321 aaPredicted RBP26.35■■□□□ 1.81
PCGF3-205ENST00000430644 YTHDC1Q96MU7 727 aaKnown RBP26.32■■□□□ 1.8
PCGF3-205ENST00000430644 ZNF316A6NFI3 1004 aaPredicted RBP26.31■■□□□ 1.8
PCGF3-205ENST00000430644 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
PCGF3-205ENST00000430644 BICRAQ9NZM4 1560 aa26.21■■□□□ 1.79
PCGF3-205ENST00000430644 WRNQ14191 1432 aaPredicted RBP eCLIP26.19■■□□□ 1.786e-6■■■■■ 35.2
PCGF3-205ENST00000430644 MROH2BQ7Z745 1585 aa26.18■■□□□ 1.78
PCGF3-205ENST00000430644 MIER1Q8N108 512 aa26.14■■□□□ 1.77
PCGF3-205ENST00000430644 WIZO95785 1651 aa26.08■■□□□ 1.77
PCGF3-205ENST00000430644 CEP162Q5TB80 1403 aa26.07■■□□□ 1.76
PCGF3-205ENST00000430644 EIF4G1Q04637 1599 aaKnown RBP26.01■■□□□ 1.75
PCGF3-205ENST00000430644 CCDC88BA6NC98 1476 aa25.93■■□□□ 1.74
PCGF3-205ENST00000430644 TNIKQ9UKE5 1360 aa25.9■■□□□ 1.74
PCGF3-205ENST00000430644 ABCC8Q09428 1581 aa25.88■■□□□ 1.73
PCGF3-205ENST00000430644 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
PCGF3-205ENST00000430644 SOGA1O94964 1423 aa25.84■■□□□ 1.73
PCGF3-205ENST00000430644 HNRNPUL2Q1KMD3 747 aaKnown RBP25.8■■□□□ 1.72
PCGF3-205ENST00000430644 UBTFP17480 764 aaKnown RBP25.78■■□□□ 1.72
PCGF3-205ENST00000430644 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
PCGF3-205ENST00000430644 CSRNP3Q8WYN3 585 aa25.72■■□□□ 1.71
PCGF3-205ENST00000430644 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
PCGF3-205ENST00000430644 SUPT16HQ9Y5B9 1047 aaKnown RBP25.67■■□□□ 1.7
PCGF3-205ENST00000430644 EEA1Q15075 1411 aa25.61■■□□□ 1.69
PCGF3-205ENST00000430644 GOLGA3Q08378 1498 aa25.58■■□□□ 1.69
PCGF3-205ENST00000430644 CLSPNQ9HAW4 1339 aa25.58■■□□□ 1.68
PCGF3-205ENST00000430644 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
PCGF3-205ENST00000430644 TSHZ2Q9NRE2 1034 aa25.52■■□□□ 1.68
PCGF3-205ENST00000430644 SMARCA2P51531 1590 aa25.51■■□□□ 1.67
PCGF3-205ENST00000430644 ANP32EQ9BTT0 268 aa25.47■■□□□ 1.67
PCGF3-205ENST00000430644 CLIP1P30622 1438 aa25.38■■□□□ 1.65
PCGF3-205ENST00000430644 ATAD2BQ9ULI0 1458 aa25.37■■□□□ 1.65
PCGF3-205ENST00000430644 VPS8Q8N3P4 1428 aa25.35■■□□□ 1.65
PCGF3-205ENST00000430644 CEP164Q9UPV0 1460 aa25.33■■□□□ 1.64
PCGF3-205ENST00000430644 APLP2Q06481 763 aa25.33■■□□□ 1.64
PCGF3-205ENST00000430644 DHX57Q6P158 1386 aaKnown RBP25.3■■□□□ 1.64
PCGF3-205ENST00000430644 BCL11AQ9H165 835 aa25.29■■□□□ 1.64
PCGF3-205ENST00000430644 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
PCGF3-205ENST00000430644 KIF21BO75037 1637 aa25.24■■□□□ 1.63
PCGF3-205ENST00000430644 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
PCGF3-205ENST00000430644 RANGAP1P46060 587 aaPredicted RBP25.2■■□□□ 1.63
PCGF3-205ENST00000430644 KCNH8Q96L42 1107 aa25.17■■□□□ 1.62
PCGF3-205ENST00000430644 BCANQ96GW7 911 aa25.14■■□□□ 1.62
PCGF3-205ENST00000430644 RAPGEF2Q9Y4G8 1499 aa25.13■■□□□ 1.61
PCGF3-205ENST00000430644 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
PCGF3-205ENST00000430644 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
PCGF3-205ENST00000430644 NCAPD3P42695 1498 aa25.08■■□□□ 1.61
PCGF3-205ENST00000430644 FKBP8Q14318 412 aa25.03■■□□□ 1.6
PCGF3-205ENST00000430644 KANK4Q5T7N3 995 aaPredicted RBP24.99■■□□□ 1.59
PCGF3-205ENST00000430644 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
PCGF3-205ENST00000430644 RBM19Q9Y4C8 960 aaKnown RBP24.94■■□□□ 1.58
PCGF3-205ENST00000430644 DNAJC5BQ9UF47 199 aa24.88■■□□□ 1.57
PCGF3-205ENST00000430644 RRBP1Q9P2E9 1410 aaKnown RBP24.88■■□□□ 1.57
PCGF3-205ENST00000430644 ARAP1Q96P48 1450 aa24.86■■□□□ 1.57
PCGF3-205ENST00000430644 CUX2O14529 1486 aa24.85■■□□□ 1.57
PCGF3-205ENST00000430644 DDX10Q13206 875 aaKnown RBP24.82■■□□□ 1.56
PCGF3-205ENST00000430644 ITGAEP38570 1179 aa24.81■■□□□ 1.56
PCGF3-205ENST00000430644 NEFLP07196 543 aa24.78■■□□□ 1.56
PCGF3-205ENST00000430644 CCNB3Q8WWL7 1395 aa24.78■■□□□ 1.56
PCGF3-205ENST00000430644 MAPKBP1O60336 1514 aa24.74■■□□□ 1.55
PCGF3-205ENST00000430644 MSH5O43196 834 aa24.72■■□□□ 1.55
PCGF3-205ENST00000430644 RAB3GAP2Q9H2M9 1393 aa24.72■■□□□ 1.55
PCGF3-205ENST00000430644 TRIM52Q96A61 297 aa24.71■■□□□ 1.55
PCGF3-205ENST00000430644 PRXQ9BXM0 1461 aa24.69■■□□□ 1.54
PCGF3-205ENST00000430644 PPP1R15AO75807 674 aaPredicted RBP24.68■■□□□ 1.54
PCGF3-205ENST00000430644 ERICH3Q5RHP9 1530 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms