RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 NISCHQ9Y2I1 1504 aa41.39■■■■■ 4.22
PCGF3-211ENST00000484141 ABCC9O60706 1549 aa37.42■■■■□ 3.58
PCGF3-211ENST00000484141 CCDC180Q9P1Z9 1646 aa36.91■■■■□ 3.5
PCGF3-211ENST00000484141 DNAJC5BQ9UF47 199 aa35.57■■■■□ 3.28
PCGF3-211ENST00000484141 RB1CC1Q8TDY2 1594 aa35.34■■■■□ 3.25
PCGF3-211ENST00000484141 NACADO15069 1562 aa34.97■■■■□ 3.19
PCGF3-211ENST00000484141 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
PCGF3-211ENST00000484141 PABPN1Q86U42 306 aaKnown RBP eCLIP34.78■■■■□ 3.16
PCGF3-211ENST00000484141 UNC13AQ9UPW8 1703 aa34.44■■■■□ 3.1
PCGF3-211ENST00000484141 MYO15BQ96JP2 1530 aa34.37■■■■□ 3.09
PCGF3-211ENST00000484141 ZCCHC6Q5VYS8 1495 aaKnown RBP34.37■■■■□ 3.09
PCGF3-211ENST00000484141 BICRAQ9NZM4 1560 aa34.31■■■■□ 3.08
PCGF3-211ENST00000484141 DCAF1Q9Y4B6 1507 aa34.1■■■■□ 3.05
PCGF3-211ENST00000484141 SCRIBQ14160 1630 aa33.81■■■■□ 3
PCGF3-211ENST00000484141 SHROOM4Q9ULL8 1493 aa33.81■■■■□ 3
PCGF3-211ENST00000484141 CECR2Q9BXF3 1484 aa33.76■■■■□ 3
PCGF3-211ENST00000484141 CC2D2AQ9P2K1 1620 aa33.73■■■□□ 2.99
PCGF3-211ENST00000484141 EIF4G1Q04637 1599 aaKnown RBP33.54■■■□□ 2.96
PCGF3-211ENST00000484141 DNAJC5Q9H3Z4 198 aa33.05■■■□□ 2.88
PCGF3-211ENST00000484141 CUX2O14529 1486 aa32.45■■■□□ 2.79
PCGF3-211ENST00000484141 ERCC6Q03468 1493 aa32.37■■■□□ 2.77
PCGF3-211ENST00000484141 NCAPD3P42695 1498 aa32.3■■■□□ 2.76
PCGF3-211ENST00000484141 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
PCGF3-211ENST00000484141 ATAD2BQ9ULI0 1458 aa32.16■■■□□ 2.74
PCGF3-211ENST00000484141 BAZ1AQ9NRL2 1556 aaPredicted RBP32.05■■■□□ 2.72
PCGF3-211ENST00000484141 SMARCA2P51531 1590 aa32.01■■■□□ 2.71
PCGF3-211ENST00000484141 HMGXB3Q12766 1538 aa32■■■□□ 2.71
PCGF3-211ENST00000484141 NESP48681 1621 aa31.98■■■□□ 2.71
PCGF3-211ENST00000484141 MROH2BQ7Z745 1585 aa31.98■■■□□ 2.71
PCGF3-211ENST00000484141 PEG3Q9GZU2 1588 aa31.84■■■□□ 2.69
PCGF3-211ENST00000484141 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
PCGF3-211ENST00000484141 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
PCGF3-211ENST00000484141 LAMC3Q9Y6N6 1575 aa31.64■■■□□ 2.66
PCGF3-211ENST00000484141 WIZO95785 1651 aa31.64■■■□□ 2.65
PCGF3-211ENST00000484141 PDS5BQ9NTI5 1447 aa31.52■■■□□ 2.64
PCGF3-211ENST00000484141 KIF21AQ7Z4S6 1674 aa31.49■■■□□ 2.63
PCGF3-211ENST00000484141 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
PCGF3-211ENST00000484141 RSF1Q96T23 1441 aaPredicted RBP31.41■■■□□ 2.62
PCGF3-211ENST00000484141 CADPSQ9ULU8 1353 aa31.31■■■□□ 2.6
PCGF3-211ENST00000484141 MRC2Q9UBG0 1479 aa31.27■■■□□ 2.6
PCGF3-211ENST00000484141 WDR62O43379 1518 aa31.19■■■□□ 2.58
PCGF3-211ENST00000484141 TOP2AP11388 1531 aaKnown RBP31.14■■■□□ 2.58
PCGF3-211ENST00000484141 CEP164Q9UPV0 1460 aa31.05■■■□□ 2.56
PCGF3-211ENST00000484141 FANCD2Q9BXW9 1451 aa30.96■■■□□ 2.55
PCGF3-211ENST00000484141 CFTRP13569 1480 aa30.93■■■□□ 2.54
PCGF3-211ENST00000484141 OSCARQ8IYS5 282 aa30.91■■■□□ 2.54
PCGF3-211ENST00000484141 CCDC88BA6NC98 1476 aa30.86■■■□□ 2.53
PCGF3-211ENST00000484141 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
PCGF3-211ENST00000484141 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
PCGF3-211ENST00000484141 RIMBP3CA6NJZ7 1639 aa30.51■■■□□ 2.48
PCGF3-211ENST00000484141 RIMBP3BA6NNM3 1639 aa30.51■■■□□ 2.48
PCGF3-211ENST00000484141 RIMBP3Q9UFD9 1639 aa30.51■■■□□ 2.48
PCGF3-211ENST00000484141 ZNF608Q9ULD9 1512 aaPredicted RBP30.45■■■□□ 2.47
PCGF3-211ENST00000484141 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
PCGF3-211ENST00000484141 ARHGEF11O15085 1522 aa30.39■■■□□ 2.46
PCGF3-211ENST00000484141 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
PCGF3-211ENST00000484141 TOPBP1Q92547 1522 aa30.36■■■□□ 2.45
PCGF3-211ENST00000484141 CYB5RLQ6IPT4 315 aa30.25■■■□□ 2.43
PCGF3-211ENST00000484141 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
PCGF3-211ENST00000484141 EIF4G3O43432 1585 aaKnown RBP30.23■■■□□ 2.43
PCGF3-211ENST00000484141 ABCC8Q09428 1581 aa30.2■■■□□ 2.42
PCGF3-211ENST00000484141 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.413e-10■■■■■ 32.7
PCGF3-211ENST00000484141 TRHP20396 242 aaPredicted RBP30.1■■■□□ 2.41
PCGF3-211ENST00000484141 TARBP1Q13395 1621 aaKnown RBP30.07■■■□□ 2.4
PCGF3-211ENST00000484141 FBLN2P98095 1184 aa30.07■■■□□ 2.4
PCGF3-211ENST00000484141 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
PCGF3-211ENST00000484141 ARAP1Q96P48 1450 aa30.06■■■□□ 2.4
PCGF3-211ENST00000484141 CHD1O14646 1710 aa30.06■■■□□ 2.4
PCGF3-211ENST00000484141 RAD54L2Q9Y4B4 1467 aa30.03■■■□□ 2.4
PCGF3-211ENST00000484141 CUX1P39880 1505 aa30.01■■■□□ 2.39
PCGF3-211ENST00000484141 FGD5Q6ZNL6 1462 aa29.94■■■□□ 2.38
PCGF3-211ENST00000484141 SOGA1O94964 1423 aa29.93■■■□□ 2.38
PCGF3-211ENST00000484141 TDRD9Q8NDG6 1382 aaKnown RBP29.88■■■□□ 2.37
PCGF3-211ENST00000484141 SNAPC4Q5SXM2 1469 aa29.8■■■□□ 2.36
PCGF3-211ENST00000484141 CHMP7Q8WUX9 453 aaPredicted RBP29.75■■■□□ 2.35
PCGF3-211ENST00000484141 CLASP1Q7Z460 1538 aa29.74■■■□□ 2.35
PCGF3-211ENST00000484141 WDR97A6NE52 1622 aa29.71■■■□□ 2.35
PCGF3-211ENST00000484141 SYNJ1O43426 1573 aa29.69■■■□□ 2.34
PCGF3-211ENST00000484141 MAGI1Q96QZ7 1491 aaPredicted RBP29.68■■■□□ 2.34
PCGF3-211ENST00000484141 GRIN2BQ13224 1484 aa29.63■■■□□ 2.33
PCGF3-211ENST00000484141 AEBP2Q6ZN18 517 aaPredicted RBP29.62■■■□□ 2.33
PCGF3-211ENST00000484141 SYNJ2O15056 1496 aa29.6■■■□□ 2.33
PCGF3-211ENST00000484141 PBRM1Q86U86 1689 aa29.57■■■□□ 2.32
PCGF3-211ENST00000484141 ABCA10Q8WWZ4 1543 aa29.57■■■□□ 2.32
PCGF3-211ENST00000484141 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.326e-6■■■■■ 35.2
PCGF3-211ENST00000484141 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
PCGF3-211ENST00000484141 GAPVD1Q14C86 1478 aa29.56■■■□□ 2.32
PCGF3-211ENST00000484141 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
PCGF3-211ENST00000484141 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
PCGF3-211ENST00000484141 ADAMTS12P58397 1594 aa29.29■■■□□ 2.28
PCGF3-211ENST00000484141 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.27
PCGF3-211ENST00000484141 GRIN2AQ12879 1464 aa29.25■■■□□ 2.27
PCGF3-211ENST00000484141 ERICH3Q5RHP9 1530 aa29.18■■■□□ 2.26
PCGF3-211ENST00000484141 CEP170Q5SW79 1584 aa29.18■■■□□ 2.26
PCGF3-211ENST00000484141 NUP160Q12769 1436 aa29.17■■■□□ 2.26
PCGF3-211ENST00000484141 FHAD1B1AJZ9 1412 aa29.16■■■□□ 2.26
PCGF3-211ENST00000484141 SHROOM2Q13796 1616 aa29.05■■■□□ 2.24
PCGF3-211ENST00000484141 IGF1RP08069 1367 aa28.97■■■□□ 2.23
PCGF3-211ENST00000484141 KIF27Q86VH2 1401 aa28.94■■■□□ 2.22
PCGF3-211ENST00000484141 PRG4Q92954 1404 aaPredicted RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms