RNA–Protein interactions for RNA: ENST00000583648.5

KPNB1-214, Transcript of karyopherin subunit beta 1, humanhuman

TSL 4

Gene KPNB1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-214ENST00000583648 NISCHQ9Y2I1 1504 aa36.03■■■■□ 3.36
KPNB1-214ENST00000583648 CCDC180Q9P1Z9 1646 aa32.14■■■□□ 2.74
KPNB1-214ENST00000583648 ABCC9O60706 1549 aa31.94■■■□□ 2.7
KPNB1-214ENST00000583648 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
KPNB1-214ENST00000583648 NACADO15069 1562 aa30.44■■■□□ 2.46
KPNB1-214ENST00000583648 DCAF8L2P0C7V8 631 aa30.33■■■□□ 2.45
KPNB1-214ENST00000583648 MYO15BQ96JP2 1530 aa30.19■■■□□ 2.42
KPNB1-214ENST00000583648 ZCCHC6Q5VYS8 1495 aaKnown RBP29.9■■■□□ 2.38
KPNB1-214ENST00000583648 DCAF1Q9Y4B6 1507 aa29.86■■■□□ 2.37
KPNB1-214ENST00000583648 PABPN1Q86U42 306 aaKnown RBP eCLIP29.83■■■□□ 2.37
KPNB1-214ENST00000583648 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
KPNB1-214ENST00000583648 UNC13AQ9UPW8 1703 aa29.59■■■□□ 2.33
KPNB1-214ENST00000583648 BICRAQ9NZM4 1560 aa29.58■■■□□ 2.33
KPNB1-214ENST00000583648 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
KPNB1-214ENST00000583648 SCRIBQ14160 1630 aa29.24■■■□□ 2.27
KPNB1-214ENST00000583648 EIF4G1Q04637 1599 aaKnown RBP28.87■■■□□ 2.21
KPNB1-214ENST00000583648 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
KPNB1-214ENST00000583648 CECR2Q9BXF3 1484 aa28.8■■■□□ 2.2
KPNB1-214ENST00000583648 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
KPNB1-214ENST00000583648 ATAD2BQ9ULI0 1458 aa28.05■■■□□ 2.08
KPNB1-214ENST00000583648 SMARCA4P51532 1647 aa27.98■■■□□ 2.07
KPNB1-214ENST00000583648 SMARCA2P51531 1590 aa27.98■■■□□ 2.07
KPNB1-214ENST00000583648 BAZ1AQ9NRL2 1556 aaPredicted RBP27.95■■■□□ 2.07
KPNB1-214ENST00000583648 HMGXB3Q12766 1538 aa27.89■■■□□ 2.06
KPNB1-214ENST00000583648 PEG3Q9GZU2 1588 aa27.79■■■□□ 2.04
KPNB1-214ENST00000583648 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.04
KPNB1-214ENST00000583648 MROH2BQ7Z745 1585 aa27.71■■■□□ 2.03
KPNB1-214ENST00000583648 ERCC6Q03468 1493 aa27.6■■■□□ 2.01
KPNB1-214ENST00000583648 CUX2O14529 1486 aa27.53■■■□□ 2
KPNB1-214ENST00000583648 NESP48681 1621 aa27.47■■□□□ 1.99
KPNB1-214ENST00000583648 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.98
KPNB1-214ENST00000583648 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.97
KPNB1-214ENST00000583648 CADPSQ9ULU8 1353 aa27.32■■□□□ 1.96
KPNB1-214ENST00000583648 RSF1Q96T23 1441 aaPredicted RBP27.31■■□□□ 1.96
KPNB1-214ENST00000583648 DNAJC5Q9H3Z4 198 aa27.3■■□□□ 1.96
KPNB1-214ENST00000583648 WIZO95785 1651 aa27.3■■□□□ 1.96
KPNB1-214ENST00000583648 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
KPNB1-214ENST00000583648 TOP2AP11388 1531 aaKnown RBP27.08■■□□□ 1.93
KPNB1-214ENST00000583648 CFTRP13569 1480 aa27.02■■□□□ 1.92
KPNB1-214ENST00000583648 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.91
KPNB1-214ENST00000583648 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
KPNB1-214ENST00000583648 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
KPNB1-214ENST00000583648 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
KPNB1-214ENST00000583648 WDR62O43379 1518 aa26.89■■□□□ 1.89
KPNB1-214ENST00000583648 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
KPNB1-214ENST00000583648 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
KPNB1-214ENST00000583648 PRDM2Q13029 1718 aa26.5■■□□□ 1.83
KPNB1-214ENST00000583648 ABCC8Q09428 1581 aa26.5■■□□□ 1.83
KPNB1-214ENST00000583648 IFT140Q96RY7 1462 aa26.43■■□□□ 1.82
KPNB1-214ENST00000583648 TOPBP1Q92547 1522 aa26.42■■□□□ 1.82
KPNB1-214ENST00000583648 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
KPNB1-214ENST00000583648 DNMBPQ6XZF7 1577 aa26.33■■□□□ 1.81
KPNB1-214ENST00000583648 ZNF608Q9ULD9 1512 aaPredicted RBP26.27■■□□□ 1.8
KPNB1-214ENST00000583648 SUPT5HO00267 1087 aaKnown RBP26.25■■□□□ 1.79
KPNB1-214ENST00000583648 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
KPNB1-214ENST00000583648 SOGA1O94964 1423 aa26.13■■□□□ 1.77
KPNB1-214ENST00000583648 TARBP1Q13395 1621 aaKnown RBP26.11■■□□□ 1.77
KPNB1-214ENST00000583648 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.77
KPNB1-214ENST00000583648 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
KPNB1-214ENST00000583648 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
KPNB1-214ENST00000583648 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
KPNB1-214ENST00000583648 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
KPNB1-214ENST00000583648 CUX1P39880 1505 aa26.02■■□□□ 1.76
KPNB1-214ENST00000583648 TDRD9Q8NDG6 1382 aaKnown RBP26■■□□□ 1.75
KPNB1-214ENST00000583648 WDR97A6NE52 1622 aa25.97■■□□□ 1.75
KPNB1-214ENST00000583648 FBLN2P98095 1184 aa25.91■■□□□ 1.74
KPNB1-214ENST00000583648 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
KPNB1-214ENST00000583648 MAGI1Q96QZ7 1491 aaPredicted RBP25.84■■□□□ 1.73
KPNB1-214ENST00000583648 CHMP7Q8WUX9 453 aaPredicted RBP25.83■■□□□ 1.73
KPNB1-214ENST00000583648 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
KPNB1-214ENST00000583648 ARHGEF11O15085 1522 aa25.81■■□□□ 1.72
KPNB1-214ENST00000583648 ABCA10Q8WWZ4 1543 aa25.8■■□□□ 1.72
KPNB1-214ENST00000583648 RIMBP3CA6NJZ7 1639 aa25.79■■□□□ 1.72
KPNB1-214ENST00000583648 RIMBP3BA6NNM3 1639 aa25.79■■□□□ 1.72
KPNB1-214ENST00000583648 RIMBP3Q9UFD9 1639 aa25.79■■□□□ 1.72
KPNB1-214ENST00000583648 WRNQ14191 1432 aaPredicted RBP eCLIP25.79■■□□□ 1.72
KPNB1-214ENST00000583648 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
KPNB1-214ENST00000583648 CHD1O14646 1710 aa25.74■■□□□ 1.71
KPNB1-214ENST00000583648 SYNJ2O15056 1496 aa25.73■■□□□ 1.71
KPNB1-214ENST00000583648 CYB5RLQ6IPT4 315 aa25.68■■□□□ 1.7
KPNB1-214ENST00000583648 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
KPNB1-214ENST00000583648 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
KPNB1-214ENST00000583648 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
KPNB1-214ENST00000583648 BIVM-ERCC5R4GMW8 1640 aa25.63■■□□□ 1.69
KPNB1-214ENST00000583648 CLASP1Q7Z460 1538 aa25.62■■□□□ 1.69
KPNB1-214ENST00000583648 ARAP1Q96P48 1450 aa25.57■■□□□ 1.68
KPNB1-214ENST00000583648 PBRM1Q86U86 1689 aa25.55■■□□□ 1.68
KPNB1-214ENST00000583648 FHAD1B1AJZ9 1412 aa25.51■■□□□ 1.67
KPNB1-214ENST00000583648 GRIN2AQ12879 1464 aa25.48■■□□□ 1.67
KPNB1-214ENST00000583648 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
KPNB1-214ENST00000583648 NUP160Q12769 1436 aa25.44■■□□□ 1.66
KPNB1-214ENST00000583648 ADAMTS12P58397 1594 aa25.43■■□□□ 1.66
KPNB1-214ENST00000583648 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
KPNB1-214ENST00000583648 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
KPNB1-214ENST00000583648 KIF27Q86VH2 1401 aa25.29■■□□□ 1.64
KPNB1-214ENST00000583648 IGF1RP08069 1367 aa25.27■■□□□ 1.64
KPNB1-214ENST00000583648 JPH4Q96JJ6 628 aa25.24■■□□□ 1.63
KPNB1-214ENST00000583648 SHROOM2Q13796 1616 aa25.19■■□□□ 1.62
KPNB1-214ENST00000583648 ERCC6L2Q5T890 1561 aa25.16■■□□□ 1.62
KPNB1-214ENST00000583648 PRG4Q92954 1404 aaPredicted RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms