RNA–Protein interactions for RNA: ENST00000551527.5

EIF4B-212, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 4

Gene EIF4B, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-212ENST00000551527 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
EIF4B-212ENST00000551527 CHIC1Q5VXU3 224 aa26.28■■□□□ 1.8
EIF4B-212ENST00000551527 PHF23Q9BUL5 403 aaPredicted RBP23.08■■□□□ 1.29
EIF4B-212ENST00000551527 SENP3Q9H4L4 574 aaPredicted RBP23.02■■□□□ 1.28
EIF4B-212ENST00000551527 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
EIF4B-212ENST00000551527 FOXD1Q16676 465 aa21.34■■□□□ 1.01
EIF4B-212ENST00000551527 PLPPR3Q6T4P5 718 aa21.3■■□□□ 1
EIF4B-212ENST00000551527 ADRA2BP18089 450 aa20.41■□□□□ 0.86
EIF4B-212ENST00000551527 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
EIF4B-212ENST00000551527 ABCC9O60706 1549 aa20.34■□□□□ 0.85
EIF4B-212ENST00000551527 PIAS4Q8N2W9 510 aaPredicted RBP20.12■□□□□ 0.81
EIF4B-212ENST00000551527 DNAJC5BQ9UF47 199 aa19.86■□□□□ 0.77
EIF4B-212ENST00000551527 MSH5O43196 834 aa19.78■□□□□ 0.76
EIF4B-212ENST00000551527 CCDC180Q9P1Z9 1646 aa19.51■□□□□ 0.71
EIF4B-212ENST00000551527 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
EIF4B-212ENST00000551527 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
EIF4B-212ENST00000551527 DNAJC5Q9H3Z4 198 aa18.76■□□□□ 0.59
EIF4B-212ENST00000551527 PPP4R3CPQ6ZMV5 832 aa18.74■□□□□ 0.59
EIF4B-212ENST00000551527 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
EIF4B-212ENST00000551527 NACADO15069 1562 aa18.68■□□□□ 0.58
EIF4B-212ENST00000551527 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.56
EIF4B-212ENST00000551527 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
EIF4B-212ENST00000551527 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.56
EIF4B-212ENST00000551527 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
EIF4B-212ENST00000551527 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.54
EIF4B-212ENST00000551527 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
EIF4B-212ENST00000551527 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
EIF4B-212ENST00000551527 CNKSR2Q8WXI2 1034 aa18.26■□□□□ 0.51
EIF4B-212ENST00000551527 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
EIF4B-212ENST00000551527 POTEDQ86YR6 584 aa18.25■□□□□ 0.51
EIF4B-212ENST00000551527 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
EIF4B-212ENST00000551527 KCNA4P22459 653 aa18.12■□□□□ 0.49
EIF4B-212ENST00000551527 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
EIF4B-212ENST00000551527 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
EIF4B-212ENST00000551527 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
EIF4B-212ENST00000551527 RNF216Q9NWF9 866 aaPredicted RBP17.93■□□□□ 0.46
EIF4B-212ENST00000551527 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
EIF4B-212ENST00000551527 CUX2O14529 1486 aa17.8■□□□□ 0.44
EIF4B-212ENST00000551527 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
EIF4B-212ENST00000551527 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
EIF4B-212ENST00000551527 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
EIF4B-212ENST00000551527 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
EIF4B-212ENST00000551527 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
EIF4B-212ENST00000551527 ERCC6Q03468 1493 aa17.58■□□□□ 0.41
EIF4B-212ENST00000551527 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
EIF4B-212ENST00000551527 NESP48681 1621 aa17.27■□□□□ 0.36
EIF4B-212ENST00000551527 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
EIF4B-212ENST00000551527 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
EIF4B-212ENST00000551527 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
EIF4B-212ENST00000551527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.339e-8■■■□□ 18
EIF4B-212ENST00000551527 HMGXB3Q12766 1538 aa17.03■□□□□ 0.32
EIF4B-212ENST00000551527 SMARCA2P51531 1590 aa17.02■□□□□ 0.31
EIF4B-212ENST00000551527 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
EIF4B-212ENST00000551527 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
EIF4B-212ENST00000551527 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.3
EIF4B-212ENST00000551527 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
EIF4B-212ENST00000551527 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
EIF4B-212ENST00000551527 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
EIF4B-212ENST00000551527 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
EIF4B-212ENST00000551527 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
EIF4B-212ENST00000551527 BAZ1AQ9NRL2 1556 aaPredicted RBP16.87■□□□□ 0.29
EIF4B-212ENST00000551527 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
EIF4B-212ENST00000551527 WDR62O43379 1518 aa16.78■□□□□ 0.28
EIF4B-212ENST00000551527 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
EIF4B-212ENST00000551527 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
EIF4B-212ENST00000551527 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
EIF4B-212ENST00000551527 C1QBPQ07021 282 aaKnown RBP16.73■□□□□ 0.27
EIF4B-212ENST00000551527 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
EIF4B-212ENST00000551527 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
EIF4B-212ENST00000551527 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
EIF4B-212ENST00000551527 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
EIF4B-212ENST00000551527 TRHP20396 242 aaPredicted RBP16.68■□□□□ 0.26
EIF4B-212ENST00000551527 ZBTB22O15209 634 aa16.65■□□□□ 0.26
EIF4B-212ENST00000551527 CYB5RLQ6IPT4 315 aa16.64■□□□□ 0.25
EIF4B-212ENST00000551527 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
EIF4B-212ENST00000551527 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
EIF4B-212ENST00000551527 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
EIF4B-212ENST00000551527 EHMT2Q96KQ7 1210 aa16.59■□□□□ 0.25
EIF4B-212ENST00000551527 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
EIF4B-212ENST00000551527 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
EIF4B-212ENST00000551527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
EIF4B-212ENST00000551527 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
EIF4B-212ENST00000551527 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
EIF4B-212ENST00000551527 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
EIF4B-212ENST00000551527 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
EIF4B-212ENST00000551527 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
EIF4B-212ENST00000551527 APLP2Q06481 763 aa16.42■□□□□ 0.22
EIF4B-212ENST00000551527 CFTRP13569 1480 aa16.39■□□□□ 0.21
EIF4B-212ENST00000551527 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
EIF4B-212ENST00000551527 ZNF608Q9ULD9 1512 aaPredicted RBP16.38■□□□□ 0.21
EIF4B-212ENST00000551527 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
EIF4B-212ENST00000551527 CAPN15O75808 1086 aa16.31■□□□□ 0.2
EIF4B-212ENST00000551527 WIZO95785 1651 aa16.3■□□□□ 0.2
EIF4B-212ENST00000551527 IFT140Q96RY7 1462 aa16.3■□□□□ 0.2
EIF4B-212ENST00000551527 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
EIF4B-212ENST00000551527 FBLN2P98095 1184 aa16.24■□□□□ 0.19
EIF4B-212ENST00000551527 CHD1O14646 1710 aa16.19■□□□□ 0.18
EIF4B-212ENST00000551527 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
EIF4B-212ENST00000551527 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
EIF4B-212ENST00000551527 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms