RNA–Protein interactions for RNA: ENST00000549645.5

EIF4B-207, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 4

Gene EIF4B, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-207ENST00000549645 AEBP2Q6ZN18 517 aaPredicted RBP24.36■■□□□ 1.49
EIF4B-207ENST00000549645 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
EIF4B-207ENST00000549645 NISCHQ9Y2I1 1504 aa21.13■□□□□ 0.97
EIF4B-207ENST00000549645 PHF23Q9BUL5 403 aaPredicted RBP20.74■□□□□ 0.91
EIF4B-207ENST00000549645 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
EIF4B-207ENST00000549645 ABCC9O60706 1549 aa20.5■□□□□ 0.87
EIF4B-207ENST00000549645 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
EIF4B-207ENST00000549645 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.69
EIF4B-207ENST00000549645 FOXD1Q16676 465 aa19.24■□□□□ 0.67
EIF4B-207ENST00000549645 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
EIF4B-207ENST00000549645 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
EIF4B-207ENST00000549645 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
EIF4B-207ENST00000549645 RB1CC1Q8TDY2 1594 aa18.91■□□□□ 0.62
EIF4B-207ENST00000549645 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
EIF4B-207ENST00000549645 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
EIF4B-207ENST00000549645 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
EIF4B-207ENST00000549645 NACADO15069 1562 aa18.51■□□□□ 0.55
EIF4B-207ENST00000549645 CC2D2AQ9P2K1 1620 aa18.42■□□□□ 0.54
EIF4B-207ENST00000549645 ADRA2BP18089 450 aa18.38■□□□□ 0.53
EIF4B-207ENST00000549645 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
EIF4B-207ENST00000549645 DCAF8L2P0C7V8 631 aa18.34■□□□□ 0.53
EIF4B-207ENST00000549645 PIAS4Q8N2W9 510 aaPredicted RBP18.15■□□□□ 0.5
EIF4B-207ENST00000549645 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
EIF4B-207ENST00000549645 TRIM41Q8WV44 630 aa18■□□□□ 0.47
EIF4B-207ENST00000549645 CUX2O14529 1486 aa17.95■□□□□ 0.46
EIF4B-207ENST00000549645 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
EIF4B-207ENST00000549645 MYO15BQ96JP2 1530 aa17.87■□□□□ 0.45
EIF4B-207ENST00000549645 MSH5O43196 834 aa17.8■□□□□ 0.44
EIF4B-207ENST00000549645 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
EIF4B-207ENST00000549645 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
EIF4B-207ENST00000549645 NESP48681 1621 aa17.36■□□□□ 0.37
EIF4B-207ENST00000549645 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
EIF4B-207ENST00000549645 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
EIF4B-207ENST00000549645 ZCCHC6Q5VYS8 1495 aaKnown RBP17.29■□□□□ 0.36
EIF4B-207ENST00000549645 NCAPD3P42695 1498 aa17.15■□□□□ 0.34
EIF4B-207ENST00000549645 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
EIF4B-207ENST00000549645 BAZ1AQ9NRL2 1556 aaPredicted RBP17.05■□□□□ 0.32
EIF4B-207ENST00000549645 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
EIF4B-207ENST00000549645 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
EIF4B-207ENST00000549645 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
EIF4B-207ENST00000549645 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.31
EIF4B-207ENST00000549645 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.31
EIF4B-207ENST00000549645 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.31
EIF4B-207ENST00000549645 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
EIF4B-207ENST00000549645 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.3
EIF4B-207ENST00000549645 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
EIF4B-207ENST00000549645 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
EIF4B-207ENST00000549645 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
EIF4B-207ENST00000549645 WDR62O43379 1518 aa16.8■□□□□ 0.28
EIF4B-207ENST00000549645 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
EIF4B-207ENST00000549645 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
EIF4B-207ENST00000549645 ARHGEF11O15085 1522 aa16.78■□□□□ 0.28
EIF4B-207ENST00000549645 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
EIF4B-207ENST00000549645 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
EIF4B-207ENST00000549645 MAPK8IP2Q13387 824 aaPredicted RBP16.72■□□□□ 0.27
EIF4B-207ENST00000549645 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
EIF4B-207ENST00000549645 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
EIF4B-207ENST00000549645 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
EIF4B-207ENST00000549645 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
EIF4B-207ENST00000549645 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
EIF4B-207ENST00000549645 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
EIF4B-207ENST00000549645 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
EIF4B-207ENST00000549645 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
EIF4B-207ENST00000549645 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
EIF4B-207ENST00000549645 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
EIF4B-207ENST00000549645 ZNF608Q9ULD9 1512 aaPredicted RBP16.41■□□□□ 0.22
EIF4B-207ENST00000549645 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
EIF4B-207ENST00000549645 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
EIF4B-207ENST00000549645 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
EIF4B-207ENST00000549645 CHD1O14646 1710 aa16.3■□□□□ 0.2
EIF4B-207ENST00000549645 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
EIF4B-207ENST00000549645 KCNA4P22459 653 aa16.25■□□□□ 0.19
EIF4B-207ENST00000549645 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.18
EIF4B-207ENST00000549645 IFT140Q96RY7 1462 aa16.2■□□□□ 0.18
EIF4B-207ENST00000549645 CFTRP13569 1480 aa16.19■□□□□ 0.18
EIF4B-207ENST00000549645 FBLN2P98095 1184 aa16.17■□□□□ 0.18
EIF4B-207ENST00000549645 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.171e-6■■■■■ 35.6
EIF4B-207ENST00000549645 WIZO95785 1651 aa16.1■□□□□ 0.17
EIF4B-207ENST00000549645 KDM4FA0A1W2PPD8 638 aa16.09■□□□□ 0.17
EIF4B-207ENST00000549645 NPM3O75607 178 aaKnown RBP16.09■□□□□ 0.17
EIF4B-207ENST00000549645 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
EIF4B-207ENST00000549645 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
EIF4B-207ENST00000549645 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
EIF4B-207ENST00000549645 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
EIF4B-207ENST00000549645 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
EIF4B-207ENST00000549645 TARBP1Q13395 1621 aaKnown RBP15.96■□□□□ 0.15
EIF4B-207ENST00000549645 KIF13AQ9H1H9 1805 aa15.92■□□□□ 0.14
EIF4B-207ENST00000549645 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
EIF4B-207ENST00000549645 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
EIF4B-207ENST00000549645 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
EIF4B-207ENST00000549645 SNAPC4Q5SXM2 1469 aa15.88■□□□□ 0.13
EIF4B-207ENST00000549645 ERCC6L2Q5T890 1561 aa15.85■□□□□ 0.13
EIF4B-207ENST00000549645 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
EIF4B-207ENST00000549645 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.12
EIF4B-207ENST00000549645 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
EIF4B-207ENST00000549645 RAD54L2Q9Y4B4 1467 aa15.82■□□□□ 0.12
EIF4B-207ENST00000549645 HECW2Q9P2P5 1572 aa15.8■□□□□ 0.12
EIF4B-207ENST00000549645 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
EIF4B-207ENST00000549645 ABCC8Q09428 1581 aa15.76■□□□□ 0.11
EIF4B-207ENST00000549645 FBXO41Q8TF61 875 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms