RNA–Protein interactions for RNA: ENST00000557031.5

NUMB-225, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-225ENST00000557031 NISCHQ9Y2I1 1504 aa32.47■■■□□ 2.79
NUMB-225ENST00000557031 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
NUMB-225ENST00000557031 ABCC9O60706 1549 aa28.98■■■□□ 2.23
NUMB-225ENST00000557031 RB1CC1Q8TDY2 1594 aa27.64■■■□□ 2.01
NUMB-225ENST00000557031 NACADO15069 1562 aa27.5■■□□□ 1.99
NUMB-225ENST00000557031 DCAF8L2P0C7V8 631 aa27.36■■□□□ 1.97
NUMB-225ENST00000557031 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
NUMB-225ENST00000557031 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
NUMB-225ENST00000557031 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
NUMB-225ENST00000557031 UNC13AQ9UPW8 1703 aa26.92■■□□□ 1.9
NUMB-225ENST00000557031 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
NUMB-225ENST00000557031 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
NUMB-225ENST00000557031 BICRAQ9NZM4 1560 aa26.83■■□□□ 1.89
NUMB-225ENST00000557031 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
NUMB-225ENST00000557031 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
NUMB-225ENST00000557031 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
NUMB-225ENST00000557031 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
NUMB-225ENST00000557031 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
NUMB-225ENST00000557031 NCAPD3P42695 1498 aa25.43■■□□□ 1.66
NUMB-225ENST00000557031 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
NUMB-225ENST00000557031 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
NUMB-225ENST00000557031 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
NUMB-225ENST00000557031 HMGXB3Q12766 1538 aa25.19■■□□□ 1.62
NUMB-225ENST00000557031 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
NUMB-225ENST00000557031 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
NUMB-225ENST00000557031 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
NUMB-225ENST00000557031 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
NUMB-225ENST00000557031 CUX2O14529 1486 aa25■■□□□ 1.59
NUMB-225ENST00000557031 MROH2BQ7Z745 1585 aa25■■□□□ 1.59
NUMB-225ENST00000557031 DNAJC5Q9H3Z4 198 aa24.95■■□□□ 1.58
NUMB-225ENST00000557031 NESP48681 1621 aa24.91■■□□□ 1.58
NUMB-225ENST00000557031 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
NUMB-225ENST00000557031 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
NUMB-225ENST00000557031 CADPSQ9ULU8 1353 aa24.66■■□□□ 1.54
NUMB-225ENST00000557031 WIZO95785 1651 aa24.65■■□□□ 1.54
NUMB-225ENST00000557031 THOC2Q8NI27 1593 aaKnown RBP24.63■■□□□ 1.53
NUMB-225ENST00000557031 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
NUMB-225ENST00000557031 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
NUMB-225ENST00000557031 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
NUMB-225ENST00000557031 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.49
NUMB-225ENST00000557031 CFTRP13569 1480 aa24.38■■□□□ 1.49
NUMB-225ENST00000557031 WDR62O43379 1518 aa24.35■■□□□ 1.49
NUMB-225ENST00000557031 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
NUMB-225ENST00000557031 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
NUMB-225ENST00000557031 CCDC88BA6NC98 1476 aa24.14■■□□□ 1.46
NUMB-225ENST00000557031 URB2Q14146 1524 aaKnown RBP24.11■■□□□ 1.45
NUMB-225ENST00000557031 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
NUMB-225ENST00000557031 OSCARQ8IYS5 282 aa23.92■■□□□ 1.42
NUMB-225ENST00000557031 ABCC8Q09428 1581 aa23.88■■□□□ 1.41
NUMB-225ENST00000557031 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
NUMB-225ENST00000557031 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
NUMB-225ENST00000557031 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
NUMB-225ENST00000557031 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
NUMB-225ENST00000557031 DNMBPQ6XZF7 1577 aa23.77■■□□□ 1.4
NUMB-225ENST00000557031 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
NUMB-225ENST00000557031 TARBP1Q13395 1621 aaKnown RBP23.63■■□□□ 1.37
NUMB-225ENST00000557031 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
NUMB-225ENST00000557031 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.37
NUMB-225ENST00000557031 SOGA1O94964 1423 aa23.56■■□□□ 1.36
NUMB-225ENST00000557031 RAD54L2Q9Y4B4 1467 aa23.53■■□□□ 1.36
NUMB-225ENST00000557031 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
NUMB-225ENST00000557031 TDRD9Q8NDG6 1382 aaKnown RBP23.49■■□□□ 1.35
NUMB-225ENST00000557031 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
NUMB-225ENST00000557031 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
NUMB-225ENST00000557031 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
NUMB-225ENST00000557031 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
NUMB-225ENST00000557031 CUX1P39880 1505 aa23.47■■□□□ 1.35
NUMB-225ENST00000557031 ARHGEF11O15085 1522 aa23.44■■□□□ 1.34
NUMB-225ENST00000557031 FBLN2P98095 1184 aa23.43■■□□□ 1.34
NUMB-225ENST00000557031 WDR97A6NE52 1622 aa23.43■■□□□ 1.34
NUMB-225ENST00000557031 CHD1O14646 1710 aa23.39■■□□□ 1.34
NUMB-225ENST00000557031 GRIN2BQ13224 1484 aa23.34■■□□□ 1.33
NUMB-225ENST00000557031 SNAPC4Q5SXM2 1469 aa23.34■■□□□ 1.33
NUMB-225ENST00000557031 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
NUMB-225ENST00000557031 CHMP7Q8WUX9 453 aaPredicted RBP23.32■■□□□ 1.32
NUMB-225ENST00000557031 CYB5RLQ6IPT4 315 aa23.31■■□□□ 1.32
NUMB-225ENST00000557031 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
NUMB-225ENST00000557031 GAPVD1Q14C86 1478 aa23.25■■□□□ 1.31
NUMB-225ENST00000557031 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
NUMB-225ENST00000557031 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
NUMB-225ENST00000557031 CLASP1Q7Z460 1538 aa23.21■■□□□ 1.31
NUMB-225ENST00000557031 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
NUMB-225ENST00000557031 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
NUMB-225ENST00000557031 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
NUMB-225ENST00000557031 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
NUMB-225ENST00000557031 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
NUMB-225ENST00000557031 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
NUMB-225ENST00000557031 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
NUMB-225ENST00000557031 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
NUMB-225ENST00000557031 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
NUMB-225ENST00000557031 NUP160Q12769 1436 aa22.97■■□□□ 1.27
NUMB-225ENST00000557031 ERICH3Q5RHP9 1530 aa22.97■■□□□ 1.27
NUMB-225ENST00000557031 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
NUMB-225ENST00000557031 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
NUMB-225ENST00000557031 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
NUMB-225ENST00000557031 SHROOM2Q13796 1616 aa22.8■■□□□ 1.24
NUMB-225ENST00000557031 JPH4Q96JJ6 628 aa22.78■■□□□ 1.24
NUMB-225ENST00000557031 IGF1RP08069 1367 aa22.74■■□□□ 1.23
NUMB-225ENST00000557031 PRG4Q92954 1404 aaPredicted RBP22.72■■□□□ 1.23
NUMB-225ENST00000557031 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms