Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.31□□□□□ -0.124e-7■■□□□ 12.2
PRPF8Q6P2Q9 PTPRS-203ENST00000586065 388 ntTSL 511.85□□□□□ -0.514e-7■■□□□ 12.2
PRPF8Q6P2Q9 PLXNB1-211ENST00000470525 835 ntTSL 515.74■□□□□ 0.114e-13■■□□□ 12.2
PRPF8Q6P2Q9 ERBB3-215ENST00000550828 266 ntTSL 1 (best)11.29□□□□□ -0.64e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADGRE5-207ENST00000587535 931 ntTSL 311.53□□□□□ -0.564e-13■■□□□ 12.2
PRPF8Q6P2Q9 ADGRE5-214ENST00000592261 573 ntTSL 411.2□□□□□ -0.624e-13■■□□□ 12.2
PRPF8Q6P2Q9 ADGRE5-211ENST00000591080 554 ntTSL 410.49□□□□□ -0.734e-13■■□□□ 12.2
PRPF8Q6P2Q9 ADGRE5-204ENST00000586517 578 ntTSL 49.72□□□□□ -0.854e-13■■□□□ 12.2
PRPF8Q6P2Q9 ADGRE5-202ENST00000357355 3054 ntTSL 1 (best) BASIC9.25□□□□□ -0.934e-13■■□□□ 12.2
PRPF8Q6P2Q9 ADGRE5-201ENST00000242786 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.034e-13■■□□□ 12.2
PRPF8Q6P2Q9 ADGRE5-209ENST00000587728 587 ntTSL 48.61□□□□□ -1.034e-13■■□□□ 12.2
PRPF8Q6P2Q9 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC8.59□□□□□ -1.034e-13■■□□□ 12.2
PRPF8Q6P2Q9 ADGRE5-208ENST00000587606 572 ntTSL 28.07□□□□□ -1.124e-13■■□□□ 12.2
PRPF8Q6P2Q9 GABBR1-216ENST00000489385 871 ntTSL 517.88■□□□□ 0.455e-7■■□□□ 12.2
PRPF8Q6P2Q9 EWSR1-220ENST00000493426 581 ntTSL 34.52□□□□□ -1.692e-9■■□□□ 12.2
PRPF8Q6P2Q9 ELMSAN1-208ENST00000476562 5314 ntTSL 216.45■□□□□ 0.221e-7■■□□□ 12.2
PRPF8Q6P2Q9 ELMSAN1-210ENST00000483269 550 ntTSL 36.89□□□□□ -1.315e-7■■□□□ 12.2
PRPF8Q6P2Q9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.311e-7■■□□□ 12.1
PRPF8Q6P2Q9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.81□□□□□ -0.361e-7■■□□□ 12.1
PRPF8Q6P2Q9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.421e-7■■□□□ 12.1
PRPF8Q6P2Q9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.521e-7■■□□□ 12.1
PRPF8Q6P2Q9 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.57□□□□□ -0.561e-7■■□□□ 12.1
PRPF8Q6P2Q9 SPPL2B-204ENST00000587851 586 ntTSL 318.25■□□□□ 0.513e-9■■□□□ 12.1
PRPF8Q6P2Q9 RAP1B-218ENST00000538877 550 ntTSL 420.77■□□□□ 0.923e-7■■□□□ 12.1
PRPF8Q6P2Q9 RAP1B-213ENST00000501412 1488 ntTSL 218.16■□□□□ 0.53e-7■■□□□ 12.1
PRPF8Q6P2Q9 RAP1B-209ENST00000460800 755 ntTSL 317.31■□□□□ 0.363e-7■■□□□ 12.1
PRPF8Q6P2Q9 RAP1B-212ENST00000489473 561 ntTSL 416.95■□□□□ 0.33e-7■■□□□ 12.1
PRPF8Q6P2Q9 RAP1B-205ENST00000422358 468 ntTSL 416.65■□□□□ 0.263e-7■■□□□ 12.1
PRPF8Q6P2Q9 RAP1B-225ENST00000541386 480 ntTSL 416.14■□□□□ 0.173e-7■■□□□ 12.1
PRPF8Q6P2Q9 RAP1B-211ENST00000485252 312 ntTSL 515□□□□□ -0.013e-7■■□□□ 12.1
PRPF8Q6P2Q9 KCTD20-203ENST00000443316 406 ntTSL 215.05■□□□□ -05e-7■■□□□ 12.1
PRPF8Q6P2Q9 CARD10-209ENST00000488141 2169 ntTSL 216.16■□□□□ 0.181e-6■■□□□ 12.1
PRPF8Q6P2Q9 CIZ1-219ENST00000485001 596 ntTSL 310.3□□□□□ -0.764e-7■■□□□ 12.1
PRPF8Q6P2Q9 CIZ1-212ENST00000471773 717 ntTSL 26.5□□□□□ -1.374e-7■■□□□ 12.1
PRPF8Q6P2Q9 SNRPA1-215ENST00000561187 509 ntTSL 223.49■■□□□ 1.353e-11■■□□□ 12.1
PRPF8Q6P2Q9 GNPNAT1-205ENST00000557604 785 ntTSL 318.36■□□□□ 0.533e-11■■□□□ 12.1
PRPF8Q6P2Q9 TJP2-204ENST00000413932 822 ntTSL 316.91■□□□□ 0.31e-31■■□□□ 12.1
PRPF8Q6P2Q9 SNRPA1-204ENST00000558020 466 ntTSL 311.72□□□□□ -0.533e-11■■□□□ 12.1
PRPF8Q6P2Q9 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.62□□□□□ -0.553e-11■■□□□ 12.1
PRPF8Q6P2Q9 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.693e-11■■□□□ 12.1
PRPF8Q6P2Q9 SOX5-211ENST00000538083 617 ntTSL 48□□□□□ -1.133e-11■■□□□ 12.1
PRPF8Q6P2Q9 SPIRE2-204ENST00000562029 2215 ntTSL 214.14□□□□□ -0.152e-6■■□□□ 12.1
PRPF8Q6P2Q9 SPIRE2-208ENST00000565628 505 ntTSL 312.17□□□□□ -0.462e-6■■□□□ 12.1
PRPF8Q6P2Q9 LUC7L-219ENST00000494545 725 ntTSL 519.43■□□□□ 0.73e-11■■□□□ 12.1
PRPF8Q6P2Q9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.933e-6■■□□□ 12.1
PRPF8Q6P2Q9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.933e-6■■□□□ 12.1
PRPF8Q6P2Q9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.013e-6■■□□□ 12.1
PRPF8Q6P2Q9 EP400-209ENST00000616136 3134 ntTSL 29.8□□□□□ -0.846e-8■■□□□ 12.1
PRPF8Q6P2Q9 REC8-204ENST00000559797 1007 ntTSL 512.02□□□□□ -0.496e-7■■□□□ 12.1
PRPF8Q6P2Q9 VTN-203ENST00000542029 501 ntTSL 39.78□□□□□ -0.842e-15■■□□□ 12.1
PRPF8Q6P2Q9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.078e-11■■□□□ 12.1
PRPF8Q6P2Q9 CTBP1-211ENST00000511907 900 ntTSL 316.59■□□□□ 0.253e-6■■□□□ 12.1
PRPF8Q6P2Q9 CTBP1-210ENST00000510739 774 ntTSL 313.7□□□□□ -0.223e-6■■□□□ 12.1
PRPF8Q6P2Q9 CDC42BPB-206ENST00000559790 713 ntTSL 316.56■□□□□ 0.242e-8■■□□□ 12.1
PRPF8Q6P2Q9 CDC42BPB-207ENST00000560492 646 ntTSL 29.3□□□□□ -0.922e-8■■□□□ 12.1
PRPF8Q6P2Q9 CSTB-202ENST00000480147 2344 nt16.16■□□□□ 0.185e-10■■□□□ 12.1
PRPF8Q6P2Q9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.53■□□□□ 0.082e-7■■□□□ 12.1
PRPF8Q6P2Q9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.88□□□□□ -0.355e-10■■□□□ 12.1
PRPF8Q6P2Q9 CSTB-203ENST00000639959 1855 ntTSL 512.19□□□□□ -0.465e-10■■□□□ 12.1
PRPF8Q6P2Q9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.555e-10■■□□□ 12.1
PRPF8Q6P2Q9 LRRFIP1-215ENST00000498053 593 ntTSL 314.83□□□□□ -0.034e-7■■□□□ 12.1
PRPF8Q6P2Q9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.264e-7■■□□□ 12.1
PRPF8Q6P2Q9 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.354e-7■■□□□ 12.1
PRPF8Q6P2Q9 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.79□□□□□ -0.524e-7■■□□□ 12.1
PRPF8Q6P2Q9 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.362e-6■■□□□ 12.1
PRPF8Q6P2Q9 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.762e-6■■□□□ 12.1
PRPF8Q6P2Q9 SLC6A8-205ENST00000442457 523 ntTSL 310.36□□□□□ -0.758e-8■■□□□ 12.1
PRPF8Q6P2Q9 HDLBP-228ENST00000459788 563 ntTSL 28.76□□□□□ -1.013e-11■■□□□ 12.1
PRPF8Q6P2Q9 ZSWIM8-208ENST00000466354 630 ntTSL 316.59■□□□□ 0.251e-7■■□□□ 12.1
PRPF8Q6P2Q9 ZSWIM8-216ENST00000603309 923 ntTSL 212.12□□□□□ -0.471e-7■■□□□ 12.1
PRPF8Q6P2Q9 PRPSAP1-204ENST00000436498 1003 ntTSL 316.88■□□□□ 0.292e-11■■□□□ 12.1
PRPF8Q6P2Q9 METTL5-209ENST00000471560 550 ntTSL 214.24□□□□□ -0.137e-8■■□□□ 12.1
PRPF8Q6P2Q9 PTPN7-203ENST00000435759 575 ntTSL 411.8□□□□□ -0.523e-6■■□□□ 12.1
PRPF8Q6P2Q9 PTPN7-215ENST00000492451 560 ntTSL 511.64□□□□□ -0.553e-6■■□□□ 12.1
PRPF8Q6P2Q9 PTPN7-205ENST00000464870 542 ntTSL 410.11□□□□□ -0.793e-6■■□□□ 12.1
PRPF8Q6P2Q9 PTPN7-211ENST00000479092 545 ntTSL 59.88□□□□□ -0.833e-6■■□□□ 12.1
PRPF8Q6P2Q9 PTPN7-206ENST00000467283 577 ntTSL 49.81□□□□□ -0.843e-6■■□□□ 12.1
PRPF8Q6P2Q9 PTPN7-214ENST00000491584 573 ntTSL 29.81□□□□□ -0.843e-6■■□□□ 12.1
PRPF8Q6P2Q9 PTPN7-219ENST00000629151 437 ntTSL 5 BASIC9.35□□□□□ -0.913e-6■■□□□ 12.1
PRPF8Q6P2Q9 PTPN7-213ENST00000486116 551 ntTSL 49.07□□□□□ -0.963e-6■■□□□ 12.1
PRPF8Q6P2Q9 PTPN7-208ENST00000476061 550 ntTSL 48.54□□□□□ -1.043e-6■■□□□ 12.1
PRPF8Q6P2Q9 ANKRD11-209ENST00000564553 471 ntTSL 311.53□□□□□ -0.562e-7■■□□□ 12.1
PRPF8Q6P2Q9 RERE-206ENST00000464367 639 ntTSL 312.78□□□□□ -0.363e-6■■□□□ 12.1
PRPF8Q6P2Q9 ATG4B-224ENST00000494132 828 ntTSL 212.59□□□□□ -0.398e-9■■□□□ 12.1
PRPF8Q6P2Q9 HDAC1-208ENST00000482310 779 ntTSL 511.01□□□□□ -0.653e-11■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-210ENST00000592298 588 ntTSL 212.61□□□□□ -0.397e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.557e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-209ENST00000603974 911 ntTSL 59.28□□□□□ -0.927e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-204ENST00000593242 586 ntTSL 48.38□□□□□ -1.077e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-212ENST00000605006 597 ntTSL 48.38□□□□□ -1.077e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-213ENST00000605071 725 ntTSL 38.36□□□□□ -1.077e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-208ENST00000603656 827 ntTSL 58.17□□□□□ -1.17e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-211ENST00000604886 587 ntTSL 48.01□□□□□ -1.137e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-213ENST00000603380 3054 ntAPPRIS P3 TSL 2 BASIC7.84□□□□□ -1.157e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-206ENST00000587557 2991 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.167e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC7.74□□□□□ -1.177e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-204ENST00000585377 571 ntTSL 47.66□□□□□ -1.187e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-216ENST00000605471 634 ntTSL 27.58□□□□□ -1.27e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-203ENST00000585352 967 ntTSL 1 (best) BASIC7.26□□□□□ -1.257e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-207ENST00000588124 801 ntTSL 57.26□□□□□ -1.257e-10■■□□□ 12.1
Retrieved 100 of 73,762 protein–RNA pairs in 999.9 ms