RNA–Protein interactions for RNA: ENST00000585352.5

ZNF559-203, Transcript of zinc finger protein 559, humanhuman

TSL 1 (best) BASIC

Gene ZNF559, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-203ENST00000585352 AEBP2Q6ZN18 517 aaPredicted RBP27.38■■□□□ 1.97
ZNF559-203ENST00000585352 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
ZNF559-203ENST00000585352 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.33
ZNF559-203ENST00000585352 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
ZNF559-203ENST00000585352 FOXD1Q16676 465 aa21.72■■□□□ 1.07
ZNF559-203ENST00000585352 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
ZNF559-203ENST00000585352 PPP6R1Q9UPN7 881 aa20.42■□□□□ 0.86
ZNF559-203ENST00000585352 NISCHQ9Y2I1 1504 aa20.42■□□□□ 0.86
ZNF559-203ENST00000585352 ADRA2BP18089 450 aa20.35■□□□□ 0.85
ZNF559-203ENST00000585352 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
ZNF559-203ENST00000585352 MSH5O43196 834 aa20.32■□□□□ 0.84
ZNF559-203ENST00000585352 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
ZNF559-203ENST00000585352 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
ZNF559-203ENST00000585352 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
ZNF559-203ENST00000585352 DMRT2Q9Y5R5 561 aa18.57■□□□□ 0.56
ZNF559-203ENST00000585352 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
ZNF559-203ENST00000585352 CNKSR2Q8WXI2 1034 aa18.08■□□□□ 0.48
ZNF559-203ENST00000585352 CCDC180Q9P1Z9 1646 aa18.07■□□□□ 0.48
ZNF559-203ENST00000585352 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
ZNF559-203ENST00000585352 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
ZNF559-203ENST00000585352 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
ZNF559-203ENST00000585352 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
ZNF559-203ENST00000585352 NPM3O75607 178 aaKnown RBP17.52■□□□□ 0.4
ZNF559-203ENST00000585352 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
ZNF559-203ENST00000585352 RNF39Q9H2S5 420 aa17.35■□□□□ 0.37
ZNF559-203ENST00000585352 KCNA4P22459 653 aa17.31■□□□□ 0.36
ZNF559-203ENST00000585352 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
ZNF559-203ENST00000585352 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
ZNF559-203ENST00000585352 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
ZNF559-203ENST00000585352 ABCC9O60706 1549 aa17.11■□□□□ 0.33
ZNF559-203ENST00000585352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
ZNF559-203ENST00000585352 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.31
ZNF559-203ENST00000585352 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
ZNF559-203ENST00000585352 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
ZNF559-203ENST00000585352 NACADO15069 1562 aa16.83■□□□□ 0.28
ZNF559-203ENST00000585352 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.27
ZNF559-203ENST00000585352 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
ZNF559-203ENST00000585352 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
ZNF559-203ENST00000585352 SCRIBQ14160 1630 aa16.49■□□□□ 0.23
ZNF559-203ENST00000585352 SHROOM4Q9ULL8 1493 aa16.43■□□□□ 0.22
ZNF559-203ENST00000585352 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
ZNF559-203ENST00000585352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.39■□□□□ 0.21
ZNF559-203ENST00000585352 HNRNPUL2Q1KMD3 747 aaKnown RBP16.39■□□□□ 0.21
ZNF559-203ENST00000585352 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
ZNF559-203ENST00000585352 CAPN15O75808 1086 aa16.36■□□□□ 0.21
ZNF559-203ENST00000585352 APLP2Q06481 763 aa16.36■□□□□ 0.21
ZNF559-203ENST00000585352 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
ZNF559-203ENST00000585352 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
ZNF559-203ENST00000585352 DSG3P32926 999 aa16.28■□□□□ 0.2
ZNF559-203ENST00000585352 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
ZNF559-203ENST00000585352 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
ZNF559-203ENST00000585352 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
ZNF559-203ENST00000585352 TRHP20396 242 aaPredicted RBP16.13■□□□□ 0.17
ZNF559-203ENST00000585352 BICRAQ9NZM4 1560 aa16.08■□□□□ 0.16
ZNF559-203ENST00000585352 ABCB7O75027 752 aa15.97■□□□□ 0.15
ZNF559-203ENST00000585352 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
ZNF559-203ENST00000585352 ZBTB22O15209 634 aa15.92■□□□□ 0.14
ZNF559-203ENST00000585352 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
ZNF559-203ENST00000585352 SMARCA4P51532 1647 aa15.79■□□□□ 0.12
ZNF559-203ENST00000585352 POLA2Q14181 598 aa15.77■□□□□ 0.12
ZNF559-203ENST00000585352 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
ZNF559-203ENST00000585352 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.11
ZNF559-203ENST00000585352 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
ZNF559-203ENST00000585352 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
ZNF559-203ENST00000585352 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
ZNF559-203ENST00000585352 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
ZNF559-203ENST00000585352 ATXN8OSP0DMR3 200 aa15.69■□□□□ 0.1
ZNF559-203ENST00000585352 SMARCA2P51531 1590 aa15.66■□□□□ 0.1
ZNF559-203ENST00000585352 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
ZNF559-203ENST00000585352 WIZO95785 1651 aa15.59■□□□□ 0.09
ZNF559-203ENST00000585352 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
ZNF559-203ENST00000585352 ZBTB12Q9Y330 459 aaPredicted RBP15.56■□□□□ 0.08
ZNF559-203ENST00000585352 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
ZNF559-203ENST00000585352 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.08
ZNF559-203ENST00000585352 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.08
ZNF559-203ENST00000585352 HMGXB3Q12766 1538 aa15.52■□□□□ 0.07
ZNF559-203ENST00000585352 CC2D2AQ9P2K1 1620 aa15.51■□□□□ 0.07
ZNF559-203ENST00000585352 NCAPD3P42695 1498 aa15.43■□□□□ 0.06
ZNF559-203ENST00000585352 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
ZNF559-203ENST00000585352 POTEHQ6S545 545 aa15.3■□□□□ 0.04
ZNF559-203ENST00000585352 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
ZNF559-203ENST00000585352 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
ZNF559-203ENST00000585352 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
ZNF559-203ENST00000585352 FBLN2P98095 1184 aa15.2■□□□□ 0.02
ZNF559-203ENST00000585352 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
ZNF559-203ENST00000585352 CHRDL2Q6WN34 429 aa15.12■□□□□ 0.01
ZNF559-203ENST00000585352 PRDM2Q13029 1718 aa15.11■□□□□ 0.01
ZNF559-203ENST00000585352 MKRN4PQ13434 485 aaPredicted RBP15.08■□□□□ 0
ZNF559-203ENST00000585352 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
ZNF559-203ENST00000585352 SPDYE6P0CI01 402 aa15.07■□□□□ 0
ZNF559-203ENST00000585352 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
ZNF559-203ENST00000585352 REM2Q8IYK8 340 aaPredicted RBP15.06■□□□□ 0
ZNF559-203ENST00000585352 LAMC3Q9Y6N6 1575 aa15.06■□□□□ 0
ZNF559-203ENST00000585352 CFTRP13569 1480 aa15.04■□□□□ -0
ZNF559-203ENST00000585352 CADPSQ9ULU8 1353 aa15.02■□□□□ -0
ZNF559-203ENST00000585352 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
ZNF559-203ENST00000585352 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
ZNF559-203ENST00000585352 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
ZNF559-203ENST00000585352 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
ZNF559-203ENST00000585352 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms