RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-205ENST00000464870 NISCHQ9Y2I1 1504 aa29.24■■■□□ 2.27
PTPN7-205ENST00000464870 CCDC180Q9P1Z9 1646 aa25.89■■□□□ 1.74
PTPN7-205ENST00000464870 ABCC9O60706 1549 aa25.4■■□□□ 1.66
PTPN7-205ENST00000464870 DCAF8L2P0C7V8 631 aa24.57■■□□□ 1.52
PTPN7-205ENST00000464870 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
PTPN7-205ENST00000464870 NACADO15069 1562 aa24.41■■□□□ 1.5
PTPN7-205ENST00000464870 ZCCHC6Q5VYS8 1495 aaKnown RBP24.35■■□□□ 1.49
PTPN7-205ENST00000464870 MYO15BQ96JP2 1530 aa24.28■■□□□ 1.48
PTPN7-205ENST00000464870 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
PTPN7-205ENST00000464870 PABPN1Q86U42 306 aaKnown RBP eCLIP23.8■■□□□ 1.4
PTPN7-205ENST00000464870 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
PTPN7-205ENST00000464870 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
PTPN7-205ENST00000464870 BICRAQ9NZM4 1560 aa23.62■■□□□ 1.37
PTPN7-205ENST00000464870 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
PTPN7-205ENST00000464870 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
PTPN7-205ENST00000464870 EIF4G1Q04637 1599 aaKnown RBP23.03■■□□□ 1.28
PTPN7-205ENST00000464870 CC2D2AQ9P2K1 1620 aa22.91■■□□□ 1.26
PTPN7-205ENST00000464870 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
PTPN7-205ENST00000464870 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
PTPN7-205ENST00000464870 SMARCA4P51532 1647 aa22.64■■□□□ 1.21
PTPN7-205ENST00000464870 ATAD2BQ9ULI0 1458 aa22.56■■□□□ 1.2
PTPN7-205ENST00000464870 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
PTPN7-205ENST00000464870 SMARCA2P51531 1590 aa22.53■■□□□ 1.2
PTPN7-205ENST00000464870 MROH2BQ7Z745 1585 aa22.53■■□□□ 1.2
PTPN7-205ENST00000464870 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
PTPN7-205ENST00000464870 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
PTPN7-205ENST00000464870 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
PTPN7-205ENST00000464870 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
PTPN7-205ENST00000464870 WIZO95785 1651 aa22.23■■□□□ 1.15
PTPN7-205ENST00000464870 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
PTPN7-205ENST00000464870 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
PTPN7-205ENST00000464870 NESP48681 1621 aa21.96■■□□□ 1.11
PTPN7-205ENST00000464870 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
PTPN7-205ENST00000464870 ERCC6Q03468 1493 aa21.91■■□□□ 1.1
PTPN7-205ENST00000464870 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
PTPN7-205ENST00000464870 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
PTPN7-205ENST00000464870 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
PTPN7-205ENST00000464870 CFTRP13569 1480 aa21.77■■□□□ 1.07
PTPN7-205ENST00000464870 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.06
PTPN7-205ENST00000464870 CUX2O14529 1486 aa21.64■■□□□ 1.05
PTPN7-205ENST00000464870 KIF21AQ7Z4S6 1674 aa21.61■■□□□ 1.05
PTPN7-205ENST00000464870 CEP164Q9UPV0 1460 aa21.61■■□□□ 1.05
PTPN7-205ENST00000464870 MRC2Q9UBG0 1479 aa21.57■■□□□ 1.04
PTPN7-205ENST00000464870 THOC2Q8NI27 1593 aaKnown RBP21.55■■□□□ 1.04
PTPN7-205ENST00000464870 WDR62O43379 1518 aa21.45■■□□□ 1.02
PTPN7-205ENST00000464870 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
PTPN7-205ENST00000464870 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.02
PTPN7-205ENST00000464870 ABCC8Q09428 1581 aa21.33■■□□□ 1.01
PTPN7-205ENST00000464870 TOPBP1Q92547 1522 aa21.29■■□□□ 1
PTPN7-205ENST00000464870 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
PTPN7-205ENST00000464870 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
PTPN7-205ENST00000464870 CUX1P39880 1505 aa21.12■□□□□ 0.97
PTPN7-205ENST00000464870 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
PTPN7-205ENST00000464870 SOGA1O94964 1423 aa21.09■□□□□ 0.97
PTPN7-205ENST00000464870 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
PTPN7-205ENST00000464870 FGD5Q6ZNL6 1462 aa21.07■□□□□ 0.96
PTPN7-205ENST00000464870 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
PTPN7-205ENST00000464870 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
PTPN7-205ENST00000464870 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
PTPN7-205ENST00000464870 DNAJC5Q9H3Z4 198 aa20.97■□□□□ 0.95
PTPN7-205ENST00000464870 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.952e-7■■■■□ 23.6
PTPN7-205ENST00000464870 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
PTPN7-205ENST00000464870 TOP2BQ02880 1626 aa20.94■□□□□ 0.94
PTPN7-205ENST00000464870 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
PTPN7-205ENST00000464870 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
PTPN7-205ENST00000464870 BIVM-ERCC5R4GMW8 1640 aa20.9■□□□□ 0.94
PTPN7-205ENST00000464870 EIF4G3O43432 1585 aaKnown RBP20.9■□□□□ 0.94
PTPN7-205ENST00000464870 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
PTPN7-205ENST00000464870 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
PTPN7-205ENST00000464870 OSCARQ8IYS5 282 aa20.84■□□□□ 0.93
PTPN7-205ENST00000464870 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
PTPN7-205ENST00000464870 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
PTPN7-205ENST00000464870 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
PTPN7-205ENST00000464870 FBLN2P98095 1184 aa20.78■□□□□ 0.92
PTPN7-205ENST00000464870 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
PTPN7-205ENST00000464870 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
PTPN7-205ENST00000464870 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
PTPN7-205ENST00000464870 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
PTPN7-205ENST00000464870 SYNJ2O15056 1496 aa20.65■□□□□ 0.9
PTPN7-205ENST00000464870 KIF27Q86VH2 1401 aa20.64■□□□□ 0.89
PTPN7-205ENST00000464870 PBRM1Q86U86 1689 aa20.63■□□□□ 0.89
PTPN7-205ENST00000464870 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
PTPN7-205ENST00000464870 FHAD1B1AJZ9 1412 aa20.59■□□□□ 0.89
PTPN7-205ENST00000464870 CHD1O14646 1710 aa20.58■□□□□ 0.89
PTPN7-205ENST00000464870 IGF1RP08069 1367 aa20.56■□□□□ 0.88
PTPN7-205ENST00000464870 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
PTPN7-205ENST00000464870 GRIN2AQ12879 1464 aa20.51■□□□□ 0.87
PTPN7-205ENST00000464870 FAM9AQ8IZU1 332 aaPredicted RBP20.45■□□□□ 0.86
PTPN7-205ENST00000464870 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
PTPN7-205ENST00000464870 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
PTPN7-205ENST00000464870 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
PTPN7-205ENST00000464870 NUP160Q12769 1436 aa20.42■□□□□ 0.86
PTPN7-205ENST00000464870 CUL7Q14999 1698 aa20.4■□□□□ 0.86
PTPN7-205ENST00000464870 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
PTPN7-205ENST00000464870 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
PTPN7-205ENST00000464870 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
PTPN7-205ENST00000464870 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
PTPN7-205ENST00000464870 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
PTPN7-205ENST00000464870 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
PTPN7-205ENST00000464870 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms