RNA–Protein interactions for RNA: ENST00000587851.1

SPPL2B-204, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 3

Gene SPPL2B, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-204ENST00000587851 NISCHQ9Y2I1 1504 aa52.77■■■■■ 6.04
SPPL2B-204ENST00000587851 CCDC180Q9P1Z9 1646 aa47.06■■■■■ 5.12
SPPL2B-204ENST00000587851 ABCC9O60706 1549 aa46.09■■■■■ 4.97
SPPL2B-204ENST00000587851 RB1CC1Q8TDY2 1594 aa44.26■■■■■ 4.68
SPPL2B-204ENST00000587851 NACADO15069 1562 aa44.14■■■■■ 4.66
SPPL2B-204ENST00000587851 DCAF8L2P0C7V8 631 aa44.1■■■■■ 4.65
SPPL2B-204ENST00000587851 ZCCHC6Q5VYS8 1495 aaKnown RBP43.98■■■■■ 4.63
SPPL2B-204ENST00000587851 MYO15BQ96JP2 1530 aa43.75■■■■■ 4.59
SPPL2B-204ENST00000587851 DCAF1Q9Y4B6 1507 aa43.58■■■■■ 4.57
SPPL2B-204ENST00000587851 UNC13AQ9UPW8 1703 aa43.5■■■■■ 4.55
SPPL2B-204ENST00000587851 SCRIBQ14160 1630 aa43.01■■■■■ 4.48
SPPL2B-204ENST00000587851 PABPN1Q86U42 306 aaKnown RBP eCLIP42.97■■■■■ 4.47
SPPL2B-204ENST00000587851 BICRAQ9NZM4 1560 aa42.97■■■■■ 4.47
SPPL2B-204ENST00000587851 SHROOM4Q9ULL8 1493 aa42.35■■■■■ 4.37
SPPL2B-204ENST00000587851 DNAJC5BQ9UF47 199 aa42.23■■■■■ 4.35
SPPL2B-204ENST00000587851 EIF4G1Q04637 1599 aaKnown RBP41.83■■■■■ 4.29
SPPL2B-204ENST00000587851 CC2D2AQ9P2K1 1620 aa41.71■■■■■ 4.27
SPPL2B-204ENST00000587851 CECR2Q9BXF3 1484 aa41.35■■■■■ 4.21
SPPL2B-204ENST00000587851 SMARCA4P51532 1647 aa41.07■■■■■ 4.16
SPPL2B-204ENST00000587851 BAZ1AQ9NRL2 1556 aaPredicted RBP40.93■■■■■ 4.14
SPPL2B-204ENST00000587851 ATAD2BQ9ULI0 1458 aa40.74■■■■■ 4.11
SPPL2B-204ENST00000587851 MROH2BQ7Z745 1585 aa40.73■■■■■ 4.11
SPPL2B-204ENST00000587851 SMARCA2P51531 1590 aa40.7■■■■■ 4.11
SPPL2B-204ENST00000587851 NCAPD3P42695 1498 aa40.65■■■■■ 4.1
SPPL2B-204ENST00000587851 HMGXB3Q12766 1538 aa40.57■■■■■ 4.08
SPPL2B-204ENST00000587851 PEG3Q9GZU2 1588 aa40.56■■■■■ 4.08
SPPL2B-204ENST00000587851 BAZ1BQ9UIG0 1483 aaKnown RBP40.45■■■■■ 4.07
SPPL2B-204ENST00000587851 WIZO95785 1651 aa40.39■■■■■ 4.06
SPPL2B-204ENST00000587851 RSF1Q96T23 1441 aaPredicted RBP40.15■■■■■ 4.02
SPPL2B-204ENST00000587851 NESP48681 1621 aa39.88■■■■□ 3.97
SPPL2B-204ENST00000587851 TOP2AP11388 1531 aaKnown RBP39.86■■■■□ 3.97
SPPL2B-204ENST00000587851 LAMC3Q9Y6N6 1575 aa39.71■■■■□ 3.95
SPPL2B-204ENST00000587851 ERCC6Q03468 1493 aa39.7■■■■□ 3.95
SPPL2B-204ENST00000587851 KIF21AQ7Z4S6 1674 aa39.54■■■■□ 3.92
SPPL2B-204ENST00000587851 CADPSQ9ULU8 1353 aa39.47■■■■□ 3.91
SPPL2B-204ENST00000587851 THOC2Q8NI27 1593 aaKnown RBP39.34■■■■□ 3.89
SPPL2B-204ENST00000587851 PDS5BQ9NTI5 1447 aa39.34■■■■□ 3.89
SPPL2B-204ENST00000587851 CCDC88BA6NC98 1476 aa39.33■■■■□ 3.89
SPPL2B-204ENST00000587851 CFTRP13569 1480 aa39.26■■■■□ 3.88
SPPL2B-204ENST00000587851 PRDM2Q13029 1718 aa39.25■■■■□ 3.87
SPPL2B-204ENST00000587851 CUX2O14529 1486 aa39.24■■■■□ 3.87
SPPL2B-204ENST00000587851 FANCD2Q9BXW9 1451 aa39.12■■■■□ 3.85
SPPL2B-204ENST00000587851 SUPT5HO00267 1087 aaKnown RBP39.12■■■■□ 3.85
SPPL2B-204ENST00000587851 CEP164Q9UPV0 1460 aa39.1■■■■□ 3.85
SPPL2B-204ENST00000587851 MRC2Q9UBG0 1479 aa39.05■■■■□ 3.84
SPPL2B-204ENST00000587851 WDR62O43379 1518 aa38.94■■■■□ 3.82
SPPL2B-204ENST00000587851 URB2Q14146 1524 aaKnown RBP38.77■■■■□ 3.8
SPPL2B-204ENST00000587851 TOPBP1Q92547 1522 aa38.51■■■■□ 3.76
SPPL2B-204ENST00000587851 DNMBPQ6XZF7 1577 aa38.48■■■■□ 3.75
SPPL2B-204ENST00000587851 ABCC8Q09428 1581 aa38.37■■■■□ 3.73
SPPL2B-204ENST00000587851 CUX1P39880 1505 aa38.22■■■■□ 3.71
SPPL2B-204ENST00000587851 IFT140Q96RY7 1462 aa38.22■■■■□ 3.71
SPPL2B-204ENST00000587851 POLA1P09884 1462 aaPredicted RBP38.16■■■■□ 3.7
SPPL2B-204ENST00000587851 ZNF608Q9ULD9 1512 aaPredicted RBP38.13■■■■□ 3.69
SPPL2B-204ENST00000587851 TARBP1Q13395 1621 aaKnown RBP38.13■■■■□ 3.69
SPPL2B-204ENST00000587851 FGD5Q6ZNL6 1462 aa38.1■■■■□ 3.69
SPPL2B-204ENST00000587851 EIF4G3O43432 1585 aaKnown RBP38.08■■■■□ 3.69
SPPL2B-204ENST00000587851 RAD54L2Q9Y4B4 1467 aa38.03■■■■□ 3.68
SPPL2B-204ENST00000587851 DNAJC5Q9H3Z4 198 aa38■■■■□ 3.67
SPPL2B-204ENST00000587851 SOGA1O94964 1423 aa37.94■■■■□ 3.66
SPPL2B-204ENST00000587851 BIVM-ERCC5R4GMW8 1640 aa37.93■■■■□ 3.66
SPPL2B-204ENST00000587851 SYNJ1O43426 1573 aa37.93■■■■□ 3.66
SPPL2B-204ENST00000587851 WDR97A6NE52 1622 aa37.91■■■■□ 3.66
SPPL2B-204ENST00000587851 WRNQ14191 1432 aaPredicted RBP eCLIP37.88■■■■□ 3.66
SPPL2B-204ENST00000587851 TOP2BQ02880 1626 aa37.87■■■■□ 3.65
SPPL2B-204ENST00000587851 AQRO60306 1485 aaKnown RBP eCLIP37.87■■■■□ 3.659e-12■■■■■ 42.6
SPPL2B-204ENST00000587851 TDRD9Q8NDG6 1382 aaKnown RBP37.77■■■■□ 3.64
SPPL2B-204ENST00000587851 CHD1O14646 1710 aa37.69■■■■□ 3.62
SPPL2B-204ENST00000587851 PBRM1Q86U86 1689 aa37.69■■■■□ 3.62
SPPL2B-204ENST00000587851 ABCA10Q8WWZ4 1543 aa37.66■■■■□ 3.62
SPPL2B-204ENST00000587851 ABCA5Q8WWZ7 1642 aa37.63■■■■□ 3.61
SPPL2B-204ENST00000587851 SNAPC4Q5SXM2 1469 aa37.58■■■■□ 3.61
SPPL2B-204ENST00000587851 GAPVD1Q14C86 1478 aa37.54■■■■□ 3.6
SPPL2B-204ENST00000587851 GRIN2BQ13224 1484 aa37.52■■■■□ 3.6
SPPL2B-204ENST00000587851 OSCARQ8IYS5 282 aa37.49■■■■□ 3.59
SPPL2B-204ENST00000587851 MAGI1Q96QZ7 1491 aaPredicted RBP37.44■■■■□ 3.58
SPPL2B-204ENST00000587851 FBLN2P98095 1184 aa37.41■■■■□ 3.58
SPPL2B-204ENST00000587851 SYNJ2O15056 1496 aa37.3■■■■□ 3.56
SPPL2B-204ENST00000587851 ADAMTS12P58397 1594 aa37.29■■■■□ 3.56
SPPL2B-204ENST00000587851 CHMP7Q8WUX9 453 aaPredicted RBP37.22■■■■□ 3.55
SPPL2B-204ENST00000587851 ERICH3Q5RHP9 1530 aa37.21■■■■□ 3.55
SPPL2B-204ENST00000587851 RIMBP3CA6NJZ7 1639 aa37.16■■■■□ 3.54
SPPL2B-204ENST00000587851 RIMBP3BA6NNM3 1639 aa37.16■■■■□ 3.54
SPPL2B-204ENST00000587851 RIMBP3Q9UFD9 1639 aa37.16■■■■□ 3.54
SPPL2B-204ENST00000587851 CLASP1Q7Z460 1538 aa37.12■■■■□ 3.53
SPPL2B-204ENST00000587851 GRIN2AQ12879 1464 aa37.09■■■■□ 3.53
SPPL2B-204ENST00000587851 ARHGEF11O15085 1522 aa37.07■■■■□ 3.53
SPPL2B-204ENST00000587851 FHAD1B1AJZ9 1412 aa37.06■■■■□ 3.52
SPPL2B-204ENST00000587851 KIF27Q86VH2 1401 aa37.05■■■■□ 3.52
SPPL2B-204ENST00000587851 CEP170Q5SW79 1584 aa37■■■■□ 3.51
SPPL2B-204ENST00000587851 CUL7Q14999 1698 aa36.96■■■■□ 3.51
SPPL2B-204ENST00000587851 TRIM41Q8WV44 630 aa36.9■■■■□ 3.5
SPPL2B-204ENST00000587851 NUP160Q12769 1436 aa36.88■■■■□ 3.49
SPPL2B-204ENST00000587851 IGF1RP08069 1367 aa36.86■■■■□ 3.49
SPPL2B-204ENST00000587851 RUSC2Q8N2Y8 1516 aa36.82■■■■□ 3.48
SPPL2B-204ENST00000587851 ARAP1Q96P48 1450 aa36.77■■■■□ 3.48
SPPL2B-204ENST00000587851 SHROOM2Q13796 1616 aa36.71■■■■□ 3.47
SPPL2B-204ENST00000587851 ERCC6L2Q5T890 1561 aa36.68■■■■□ 3.46
SPPL2B-204ENST00000587851 CARMIL1Q5VZK9 1371 aa36.67■■■■□ 3.46
SPPL2B-204ENST00000587851 CYB5RLQ6IPT4 315 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms