RNA–Protein interactions for RNA: ENST00000565628.1

SPIRE2-208, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 3

Gene SPIRE2, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-208ENST00000565628 NISCHQ9Y2I1 1504 aa35.22■■■■□ 3.23
SPIRE2-208ENST00000565628 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.59
SPIRE2-208ENST00000565628 ABCC9O60706 1549 aa30.72■■■□□ 2.51
SPIRE2-208ENST00000565628 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
SPIRE2-208ENST00000565628 RB1CC1Q8TDY2 1594 aa29.53■■■□□ 2.32
SPIRE2-208ENST00000565628 NACADO15069 1562 aa29.51■■■□□ 2.31
SPIRE2-208ENST00000565628 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
SPIRE2-208ENST00000565628 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
SPIRE2-208ENST00000565628 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
SPIRE2-208ENST00000565628 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.22e-8■■□□□ 11.8
SPIRE2-208ENST00000565628 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
SPIRE2-208ENST00000565628 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
SPIRE2-208ENST00000565628 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
SPIRE2-208ENST00000565628 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
SPIRE2-208ENST00000565628 DNAJC5BQ9UF47 199 aa28.26■■■□□ 2.11
SPIRE2-208ENST00000565628 EIF4G1Q04637 1599 aaKnown RBP27.83■■■□□ 2.05
SPIRE2-208ENST00000565628 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.03
SPIRE2-208ENST00000565628 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
SPIRE2-208ENST00000565628 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
SPIRE2-208ENST00000565628 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
SPIRE2-208ENST00000565628 SMARCA4P51532 1647 aa27.25■■□□□ 1.95
SPIRE2-208ENST00000565628 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
SPIRE2-208ENST00000565628 SMARCA2P51531 1590 aa27.21■■□□□ 1.95
SPIRE2-208ENST00000565628 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
SPIRE2-208ENST00000565628 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
SPIRE2-208ENST00000565628 PEG3Q9GZU2 1588 aa27.03■■□□□ 1.92
SPIRE2-208ENST00000565628 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
SPIRE2-208ENST00000565628 RSF1Q96T23 1441 aaPredicted RBP26.85■■□□□ 1.89
SPIRE2-208ENST00000565628 WIZO95785 1651 aa26.71■■□□□ 1.87
SPIRE2-208ENST00000565628 ERCC6Q03468 1493 aa26.58■■□□□ 1.85
SPIRE2-208ENST00000565628 TOP2AP11388 1531 aaKnown RBP26.53■■□□□ 1.84
SPIRE2-208ENST00000565628 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
SPIRE2-208ENST00000565628 NESP48681 1621 aa26.5■■□□□ 1.83
SPIRE2-208ENST00000565628 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
SPIRE2-208ENST00000565628 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
SPIRE2-208ENST00000565628 CUX2O14529 1486 aa26.29■■□□□ 1.8
SPIRE2-208ENST00000565628 CFTRP13569 1480 aa26.29■■□□□ 1.8
SPIRE2-208ENST00000565628 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
SPIRE2-208ENST00000565628 SUPT5HO00267 1087 aaKnown RBP26.25■■□□□ 1.79
SPIRE2-208ENST00000565628 FANCD2Q9BXW9 1451 aa26.15■■□□□ 1.78
SPIRE2-208ENST00000565628 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
SPIRE2-208ENST00000565628 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
SPIRE2-208ENST00000565628 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
SPIRE2-208ENST00000565628 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
SPIRE2-208ENST00000565628 WDR62O43379 1518 aa25.93■■□□□ 1.74
SPIRE2-208ENST00000565628 URB2Q14146 1524 aaKnown RBP25.81■■□□□ 1.72
SPIRE2-208ENST00000565628 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
SPIRE2-208ENST00000565628 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
SPIRE2-208ENST00000565628 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
SPIRE2-208ENST00000565628 DNAJC5Q9H3Z4 198 aa25.63■■□□□ 1.69
SPIRE2-208ENST00000565628 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
SPIRE2-208ENST00000565628 IFT140Q96RY7 1462 aa25.6■■□□□ 1.69
SPIRE2-208ENST00000565628 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
SPIRE2-208ENST00000565628 SOGA1O94964 1423 aa25.46■■□□□ 1.67
SPIRE2-208ENST00000565628 CUX1P39880 1505 aa25.42■■□□□ 1.66
SPIRE2-208ENST00000565628 ZNF608Q9ULD9 1512 aaPredicted RBP25.39■■□□□ 1.66
SPIRE2-208ENST00000565628 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.65
SPIRE2-208ENST00000565628 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.65
SPIRE2-208ENST00000565628 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
SPIRE2-208ENST00000565628 OSCARQ8IYS5 282 aa25.34■■□□□ 1.65
SPIRE2-208ENST00000565628 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.641e-9■■■□□ 16
SPIRE2-208ENST00000565628 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
SPIRE2-208ENST00000565628 TARBP1Q13395 1621 aaKnown RBP25.3■■□□□ 1.64
SPIRE2-208ENST00000565628 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
SPIRE2-208ENST00000565628 WDR97A6NE52 1622 aa25.2■■□□□ 1.62
SPIRE2-208ENST00000565628 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
SPIRE2-208ENST00000565628 FBLN2P98095 1184 aa25.17■■□□□ 1.62
SPIRE2-208ENST00000565628 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
SPIRE2-208ENST00000565628 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
SPIRE2-208ENST00000565628 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
SPIRE2-208ENST00000565628 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
SPIRE2-208ENST00000565628 CHMP7Q8WUX9 453 aaPredicted RBP25.11■■□□□ 1.61
SPIRE2-208ENST00000565628 BIVM-ERCC5R4GMW8 1640 aa25.1■■□□□ 1.61
SPIRE2-208ENST00000565628 MAGI1Q96QZ7 1491 aaPredicted RBP25.07■■□□□ 1.6
SPIRE2-208ENST00000565628 SNAPC4Q5SXM2 1469 aa25.04■■□□□ 1.6
SPIRE2-208ENST00000565628 SYNJ2O15056 1496 aa24.97■■□□□ 1.59
SPIRE2-208ENST00000565628 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
SPIRE2-208ENST00000565628 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
SPIRE2-208ENST00000565628 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
SPIRE2-208ENST00000565628 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
SPIRE2-208ENST00000565628 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
SPIRE2-208ENST00000565628 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
SPIRE2-208ENST00000565628 CHD1O14646 1710 aa24.81■■□□□ 1.56
SPIRE2-208ENST00000565628 IGF1RP08069 1367 aa24.78■■□□□ 1.56
SPIRE2-208ENST00000565628 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
SPIRE2-208ENST00000565628 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
SPIRE2-208ENST00000565628 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
SPIRE2-208ENST00000565628 CLASP1Q7Z460 1538 aa24.67■■□□□ 1.54
SPIRE2-208ENST00000565628 NUP160Q12769 1436 aa24.67■■□□□ 1.54
SPIRE2-208ENST00000565628 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
SPIRE2-208ENST00000565628 CARMIL1Q5VZK9 1371 aa24.64■■□□□ 1.53
SPIRE2-208ENST00000565628 RIMBP3CA6NJZ7 1639 aa24.62■■□□□ 1.53
SPIRE2-208ENST00000565628 RIMBP3BA6NNM3 1639 aa24.62■■□□□ 1.53
SPIRE2-208ENST00000565628 RIMBP3Q9UFD9 1639 aa24.62■■□□□ 1.53
SPIRE2-208ENST00000565628 JPH4Q96JJ6 628 aa24.56■■□□□ 1.52
SPIRE2-208ENST00000565628 CUL7Q14999 1698 aa24.56■■□□□ 1.52
SPIRE2-208ENST00000565628 CEP170Q5SW79 1584 aa24.54■■□□□ 1.52
SPIRE2-208ENST00000565628 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
SPIRE2-208ENST00000565628 KIAA0586Q9BVV6 1533 aa24.47■■□□□ 1.51
SPIRE2-208ENST00000565628 RUSC2Q8N2Y8 1516 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms