RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 NISCHQ9Y2I1 1504 aa34.06■■■■□ 3.04
PTPN7-203ENST00000435759 ABCC9O60706 1549 aa30.61■■■□□ 2.49
PTPN7-203ENST00000435759 CCDC180Q9P1Z9 1646 aa30.32■■■□□ 2.44
PTPN7-203ENST00000435759 DCAF8L2P0C7V8 631 aa29.01■■■□□ 2.23
PTPN7-203ENST00000435759 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
PTPN7-203ENST00000435759 DNAJC5BQ9UF47 199 aa28.92■■■□□ 2.22
PTPN7-203ENST00000435759 NACADO15069 1562 aa28.78■■■□□ 2.2
PTPN7-203ENST00000435759 PABPN1Q86U42 306 aaKnown RBP eCLIP28.67■■■□□ 2.18
PTPN7-203ENST00000435759 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
PTPN7-203ENST00000435759 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
PTPN7-203ENST00000435759 BICRAQ9NZM4 1560 aa28.21■■■□□ 2.11
PTPN7-203ENST00000435759 ZCCHC6Q5VYS8 1495 aaKnown RBP28.18■■■□□ 2.1
PTPN7-203ENST00000435759 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
PTPN7-203ENST00000435759 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
PTPN7-203ENST00000435759 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.02
PTPN7-203ENST00000435759 CC2D2AQ9P2K1 1620 aa27.54■■■□□ 2
PTPN7-203ENST00000435759 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
PTPN7-203ENST00000435759 EIF4G1Q04637 1599 aaKnown RBP27.48■■□□□ 1.99
PTPN7-203ENST00000435759 NCAPD3P42695 1498 aa26.68■■□□□ 1.86
PTPN7-203ENST00000435759 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
PTPN7-203ENST00000435759 SMARCA4P51532 1647 aa26.48■■□□□ 1.83
PTPN7-203ENST00000435759 DNAJC5Q9H3Z4 198 aa26.42■■□□□ 1.82
PTPN7-203ENST00000435759 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
PTPN7-203ENST00000435759 BAZ1AQ9NRL2 1556 aaPredicted RBP26.35■■□□□ 1.81
PTPN7-203ENST00000435759 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
PTPN7-203ENST00000435759 ERCC6Q03468 1493 aa26.34■■□□□ 1.81
PTPN7-203ENST00000435759 NESP48681 1621 aa26.32■■□□□ 1.8
PTPN7-203ENST00000435759 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
PTPN7-203ENST00000435759 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
PTPN7-203ENST00000435759 CUX2O14529 1486 aa26.23■■□□□ 1.79
PTPN7-203ENST00000435759 PEG3Q9GZU2 1588 aa26.2■■□□□ 1.78
PTPN7-203ENST00000435759 LAMC3Q9Y6N6 1575 aa25.95■■□□□ 1.74
PTPN7-203ENST00000435759 WIZO95785 1651 aa25.93■■□□□ 1.74
PTPN7-203ENST00000435759 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
PTPN7-203ENST00000435759 PDS5BQ9NTI5 1447 aa25.91■■□□□ 1.74
PTPN7-203ENST00000435759 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
PTPN7-203ENST00000435759 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
PTPN7-203ENST00000435759 KIF21AQ7Z4S6 1674 aa25.78■■□□□ 1.72
PTPN7-203ENST00000435759 MRC2Q9UBG0 1479 aa25.65■■□□□ 1.7
PTPN7-203ENST00000435759 CFTRP13569 1480 aa25.58■■□□□ 1.69
PTPN7-203ENST00000435759 FANCD2Q9BXW9 1451 aa25.57■■□□□ 1.68
PTPN7-203ENST00000435759 WDR62O43379 1518 aa25.54■■□□□ 1.68
PTPN7-203ENST00000435759 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
PTPN7-203ENST00000435759 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
PTPN7-203ENST00000435759 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
PTPN7-203ENST00000435759 URB2Q14146 1524 aaKnown RBP25.37■■□□□ 1.65
PTPN7-203ENST00000435759 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
PTPN7-203ENST00000435759 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
PTPN7-203ENST00000435759 ZNF608Q9ULD9 1512 aaPredicted RBP25.11■■□□□ 1.61
PTPN7-203ENST00000435759 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
PTPN7-203ENST00000435759 IFT140Q96RY7 1462 aa25.04■■□□□ 1.6
PTPN7-203ENST00000435759 PRDM2Q13029 1718 aa25.01■■□□□ 1.59
PTPN7-203ENST00000435759 ABCC8Q09428 1581 aa24.95■■□□□ 1.58
PTPN7-203ENST00000435759 AQRO60306 1485 aaKnown RBP eCLIP24.92■■□□□ 1.582e-7■■■■□ 23.6
PTPN7-203ENST00000435759 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
PTPN7-203ENST00000435759 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
PTPN7-203ENST00000435759 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.57
PTPN7-203ENST00000435759 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.56
PTPN7-203ENST00000435759 FBLN2P98095 1184 aa24.81■■□□□ 1.56
PTPN7-203ENST00000435759 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
PTPN7-203ENST00000435759 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
PTPN7-203ENST00000435759 SOGA1O94964 1423 aa24.79■■□□□ 1.56
PTPN7-203ENST00000435759 EIF4G3O43432 1585 aaKnown RBP24.79■■□□□ 1.56
PTPN7-203ENST00000435759 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
PTPN7-203ENST00000435759 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
PTPN7-203ENST00000435759 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
PTPN7-203ENST00000435759 CYB5RLQ6IPT4 315 aa24.71■■□□□ 1.55
PTPN7-203ENST00000435759 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
PTPN7-203ENST00000435759 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
PTPN7-203ENST00000435759 CUX1P39880 1505 aa24.67■■□□□ 1.54
PTPN7-203ENST00000435759 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.53
PTPN7-203ENST00000435759 CHD1O14646 1710 aa24.57■■□□□ 1.52
PTPN7-203ENST00000435759 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
PTPN7-203ENST00000435759 GRIN2BQ13224 1484 aa24.49■■□□□ 1.51
PTPN7-203ENST00000435759 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
PTPN7-203ENST00000435759 GAPVD1Q14C86 1478 aa24.43■■□□□ 1.5
PTPN7-203ENST00000435759 MAGI1Q96QZ7 1491 aaPredicted RBP24.43■■□□□ 1.5
PTPN7-203ENST00000435759 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
PTPN7-203ENST00000435759 SYNJ2O15056 1496 aa24.39■■□□□ 1.5
PTPN7-203ENST00000435759 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
PTPN7-203ENST00000435759 CLASP1Q7Z460 1538 aa24.37■■□□□ 1.49
PTPN7-203ENST00000435759 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
PTPN7-203ENST00000435759 WRNQ14191 1432 aaPredicted RBP eCLIP24.32■■□□□ 1.48
PTPN7-203ENST00000435759 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
PTPN7-203ENST00000435759 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
PTPN7-203ENST00000435759 PBRM1Q86U86 1689 aa24.23■■□□□ 1.47
PTPN7-203ENST00000435759 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
PTPN7-203ENST00000435759 GRIN2AQ12879 1464 aa24.16■■□□□ 1.46
PTPN7-203ENST00000435759 BIVM-ERCC5R4GMW8 1640 aa24.14■■□□□ 1.46
PTPN7-203ENST00000435759 FHAD1B1AJZ9 1412 aa24.11■■□□□ 1.45
PTPN7-203ENST00000435759 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
PTPN7-203ENST00000435759 NUP160Q12769 1436 aa24.1■■□□□ 1.45
PTPN7-203ENST00000435759 ADAMTS12P58397 1594 aa24.08■■□□□ 1.44
PTPN7-203ENST00000435759 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
PTPN7-203ENST00000435759 ERICH3Q5RHP9 1530 aa24.02■■□□□ 1.44
PTPN7-203ENST00000435759 JPH4Q96JJ6 628 aa24.01■■□□□ 1.43
PTPN7-203ENST00000435759 IGF1RP08069 1367 aa23.93■■□□□ 1.42
PTPN7-203ENST00000435759 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
PTPN7-203ENST00000435759 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
PTPN7-203ENST00000435759 KIF27Q86VH2 1401 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms