RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
ZNF559-213ENST00000603380 HRCP23327 699 aa19.18■□□□□ 0.66
ZNF559-213ENST00000603380 PELP1Q8IZL8 1130 aaKnown RBP19■□□□□ 0.63
ZNF559-213ENST00000603380 PPARGC1BQ86YN6 1023 aaKnown RBP18.71■□□□□ 0.59
ZNF559-213ENST00000603380 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
ZNF559-213ENST00000603380 MYT1Q01538 1121 aa18.36■□□□□ 0.53
ZNF559-213ENST00000603380 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
ZNF559-213ENST00000603380 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.52
ZNF559-213ENST00000603380 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
ZNF559-213ENST00000603380 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
ZNF559-213ENST00000603380 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
ZNF559-213ENST00000603380 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
ZNF559-213ENST00000603380 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
ZNF559-213ENST00000603380 TRIM26Q12899 539 aaPredicted RBP17.89■□□□□ 0.45
ZNF559-213ENST00000603380 ZEB1P37275 1124 aaPredicted RBP17.85■□□□□ 0.45
ZNF559-213ENST00000603380 ACIN1Q9UKV3 1341 aaKnown RBP17.76■□□□□ 0.43
ZNF559-213ENST00000603380 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
ZNF559-213ENST00000603380 LOC105371045A0A1W2PR82 267 aa17.68■□□□□ 0.42
ZNF559-213ENST00000603380 GTF3C3Q9Y5Q9 886 aa17.6■□□□□ 0.41
ZNF559-213ENST00000603380 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
ZNF559-213ENST00000603380 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
ZNF559-213ENST00000603380 ZCCHC6Q5VYS8 1495 aaKnown RBP17.29■□□□□ 0.36
ZNF559-213ENST00000603380 DIEXFQ68CQ4 756 aaKnown RBP17.24■□□□□ 0.35
ZNF559-213ENST00000603380 BCL11AQ9H165 835 aa17.14■□□□□ 0.33
ZNF559-213ENST00000603380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
ZNF559-213ENST00000603380 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.32
ZNF559-213ENST00000603380 CCER1Q8TC90 406 aaPredicted RBP17.01■□□□□ 0.31
ZNF559-213ENST00000603380 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
ZNF559-213ENST00000603380 ANP32EQ9BTT0 268 aa16.93■□□□□ 0.3
ZNF559-213ENST00000603380 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
ZNF559-213ENST00000603380 ZNF316A6NFI3 1004 aaPredicted RBP16.83■□□□□ 0.28
ZNF559-213ENST00000603380 MIER1Q8N108 512 aa16.78■□□□□ 0.28
ZNF559-213ENST00000603380 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
ZNF559-213ENST00000603380 TSHZ2Q9NRE2 1034 aa16.74■□□□□ 0.27
ZNF559-213ENST00000603380 PRKCSHP14314 528 aaPredicted RBP16.71■□□□□ 0.27
ZNF559-213ENST00000603380 SUPT16HQ9Y5B9 1047 aaKnown RBP16.7■□□□□ 0.26
ZNF559-213ENST00000603380 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
ZNF559-213ENST00000603380 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
ZNF559-213ENST00000603380 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
ZNF559-213ENST00000603380 ABCC9O60706 1549 aa16.5■□□□□ 0.23
ZNF559-213ENST00000603380 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
ZNF559-213ENST00000603380 WRNQ14191 1432 aaPredicted RBP eCLIP16.42■□□□□ 0.22
ZNF559-213ENST00000603380 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
ZNF559-213ENST00000603380 ERICH6Q7L0X2 663 aa16.31■□□□□ 0.2
ZNF559-213ENST00000603380 RBM19Q9Y4C8 960 aaKnown RBP16.29■□□□□ 0.2
ZNF559-213ENST00000603380 MSH5O43196 834 aa16.22■□□□□ 0.19
ZNF559-213ENST00000603380 BCANQ96GW7 911 aa16.2■□□□□ 0.18
ZNF559-213ENST00000603380 CEP162Q5TB80 1403 aa16.2■□□□□ 0.18
ZNF559-213ENST00000603380 APLP2Q06481 763 aa16.18■□□□□ 0.18
ZNF559-213ENST00000603380 FKBP8Q14318 412 aa16.13■□□□□ 0.17
ZNF559-213ENST00000603380 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
ZNF559-213ENST00000603380 TNIKQ9UKE5 1360 aa16.07■□□□□ 0.16
ZNF559-213ENST00000603380 KCNH8Q96L42 1107 aa16.06■□□□□ 0.16
ZNF559-213ENST00000603380 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
ZNF559-213ENST00000603380 FANCIQ9NVI1 1328 aa16.04■□□□□ 0.16
ZNF559-213ENST00000603380 MYT1LQ9UL68 1186 aa16.01■□□□□ 0.15
ZNF559-213ENST00000603380 ITGAEP38570 1179 aa15.99■□□□□ 0.15
ZNF559-213ENST00000603380 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
ZNF559-213ENST00000603380 DEKP35659 375 aaKnown RBP15.98■□□□□ 0.15
ZNF559-213ENST00000603380 NEFLP07196 543 aa15.93■□□□□ 0.14
ZNF559-213ENST00000603380 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
ZNF559-213ENST00000603380 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
ZNF559-213ENST00000603380 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
ZNF559-213ENST00000603380 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
ZNF559-213ENST00000603380 SOGA1O94964 1423 aa15.87■□□□□ 0.13
ZNF559-213ENST00000603380 SALL2Q9Y467 1007 aaPredicted RBP15.86■□□□□ 0.13
ZNF559-213ENST00000603380 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
ZNF559-213ENST00000603380 MROH2BQ7Z745 1585 aa15.83■□□□□ 0.13
ZNF559-213ENST00000603380 ERICH6BQ5W0A0 696 aa15.83■□□□□ 0.12
ZNF559-213ENST00000603380 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
ZNF559-213ENST00000603380 WIZO95785 1651 aa15.8■□□□□ 0.12
ZNF559-213ENST00000603380 EEA1Q15075 1411 aa15.79■□□□□ 0.12
ZNF559-213ENST00000603380 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
ZNF559-213ENST00000603380 CDK11AQ9UQ88 783 aaPredicted RBP15.78■□□□□ 0.12
ZNF559-213ENST00000603380 RUSC2Q8N2Y8 1516 aa15.77■□□□□ 0.11
ZNF559-213ENST00000603380 TRIM52Q96A61 297 aa15.74■□□□□ 0.11
ZNF559-213ENST00000603380 CLIP1P30622 1438 aa15.73■□□□□ 0.11
ZNF559-213ENST00000603380 UBE2Q2Q8WVN8 375 aa15.73■□□□□ 0.11
ZNF559-213ENST00000603380 VPS8Q8N3P4 1428 aa15.73■□□□□ 0.11
ZNF559-213ENST00000603380 CCDC136Q96JN2 1154 aa15.72■□□□□ 0.11
ZNF559-213ENST00000603380 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
ZNF559-213ENST00000603380 DDX10Q13206 875 aaKnown RBP15.69■□□□□ 0.1
ZNF559-213ENST00000603380 NACADO15069 1562 aa15.68■□□□□ 0.1
ZNF559-213ENST00000603380 CCER2I3L3R5 266 aa15.67■□□□□ 0.1
ZNF559-213ENST00000603380 NBR1Q14596 966 aa15.66■□□□□ 0.1
ZNF559-213ENST00000603380 PPP1R15AO75807 674 aaPredicted RBP15.65■□□□□ 0.1
ZNF559-213ENST00000603380 NOP58Q9Y2X3 529 aaKnown RBP15.64■□□□□ 0.09
ZNF559-213ENST00000603380 IL27Q8NEV9 243 aa15.63■□□□□ 0.09
ZNF559-213ENST00000603380 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
ZNF559-213ENST00000603380 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
ZNF559-213ENST00000603380 CUX2O14529 1486 aa15.6■□□□□ 0.09
ZNF559-213ENST00000603380 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
ZNF559-213ENST00000603380 KIF21BO75037 1637 aa15.57■□□□□ 0.08
ZNF559-213ENST00000603380 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.57■□□□□ 0.08
ZNF559-213ENST00000603380 ANP32CO43423 234 aa15.54■□□□□ 0.08
ZNF559-213ENST00000603380 RTN4Q9NQC3 1192 aaKnown RBP15.54■□□□□ 0.08
ZNF559-213ENST00000603380 PPP4R2Q9NY27 417 aa15.54■□□□□ 0.08
ZNF559-213ENST00000603380 MAPKBP1O60336 1514 aa15.54■□□□□ 0.08
ZNF559-213ENST00000603380 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
ZNF559-213ENST00000603380 RRBP1Q9P2E9 1410 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms