RNA–Protein interactions for RNA: ENST00000216410.7

GNPNAT1-201, Transcript of glucosamine-phosphate N-acetyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNPNAT1, Length 3,860 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPNAT1-201ENST00000216410 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
GNPNAT1-201ENST00000216410 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
GNPNAT1-201ENST00000216410 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
GNPNAT1-201ENST00000216410 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
GNPNAT1-201ENST00000216410 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
GNPNAT1-201ENST00000216410 EHMT2Q96KQ7 1210 aa21.27■□□□□ 0.99
GNPNAT1-201ENST00000216410 HRCP23327 699 aa21.13■□□□□ 0.97
GNPNAT1-201ENST00000216410 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
GNPNAT1-201ENST00000216410 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
GNPNAT1-201ENST00000216410 LOC105371045A0A1W2PR82 267 aa20.91■□□□□ 0.94
GNPNAT1-201ENST00000216410 FAM9AQ8IZU1 332 aaPredicted RBP20.91■□□□□ 0.94
GNPNAT1-201ENST00000216410 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
GNPNAT1-201ENST00000216410 TRIM26Q12899 539 aaPredicted RBP20.49■□□□□ 0.87
GNPNAT1-201ENST00000216410 TRIM41Q8WV44 630 aa20.45■□□□□ 0.86
GNPNAT1-201ENST00000216410 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
GNPNAT1-201ENST00000216410 ZEB1P37275 1124 aaPredicted RBP20.28■□□□□ 0.84
GNPNAT1-201ENST00000216410 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
GNPNAT1-201ENST00000216410 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.8
GNPNAT1-201ENST00000216410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.06■□□□□ 0.8
GNPNAT1-201ENST00000216410 YTHDC1Q96MU7 727 aaKnown RBP20.04■□□□□ 0.8
GNPNAT1-201ENST00000216410 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
GNPNAT1-201ENST00000216410 CENPBP07199 599 aaPredicted RBP19.94■□□□□ 0.78
GNPNAT1-201ENST00000216410 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
GNPNAT1-201ENST00000216410 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.77
GNPNAT1-201ENST00000216410 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
GNPNAT1-201ENST00000216410 UBTFP17480 764 aaKnown RBP19.77■□□□□ 0.76
GNPNAT1-201ENST00000216410 DIEXFQ68CQ4 756 aaKnown RBP19.74■□□□□ 0.75
GNPNAT1-201ENST00000216410 GTF3C3Q9Y5Q9 886 aa19.73■□□□□ 0.75
GNPNAT1-201ENST00000216410 APLP2Q06481 763 aa19.64■□□□□ 0.73
GNPNAT1-201ENST00000216410 HNRNPUL2Q1KMD3 747 aaKnown RBP19.61■□□□□ 0.73
GNPNAT1-201ENST00000216410 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
GNPNAT1-201ENST00000216410 ACIN1Q9UKV3 1341 aaKnown RBP19.6■□□□□ 0.73
GNPNAT1-201ENST00000216410 CCDC180Q9P1Z9 1646 aa19.36■□□□□ 0.69
GNPNAT1-201ENST00000216410 ABCC9O60706 1549 aa19.34■□□□□ 0.69
GNPNAT1-201ENST00000216410 SCRIBQ14160 1630 aa19.34■□□□□ 0.69
GNPNAT1-201ENST00000216410 ZNF316A6NFI3 1004 aaPredicted RBP19.27■□□□□ 0.68
GNPNAT1-201ENST00000216410 ITGAEP38570 1179 aa19.26■□□□□ 0.67
GNPNAT1-201ENST00000216410 RSF1Q96T23 1441 aaPredicted RBP19.23■□□□□ 0.67
GNPNAT1-201ENST00000216410 MYT1Q01538 1121 aa19.21■□□□□ 0.67
GNPNAT1-201ENST00000216410 MIER1Q8N108 512 aa19.12■□□□□ 0.65
GNPNAT1-201ENST00000216410 ATP1B4Q9UN42 357 aaPredicted RBP19.12■□□□□ 0.65
GNPNAT1-201ENST00000216410 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
GNPNAT1-201ENST00000216410 BCANQ96GW7 911 aa19.06■□□□□ 0.64
GNPNAT1-201ENST00000216410 CSRNP3Q8WYN3 585 aa19.04■□□□□ 0.64
GNPNAT1-201ENST00000216410 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
GNPNAT1-201ENST00000216410 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
GNPNAT1-201ENST00000216410 NEFLP07196 543 aa18.88■□□□□ 0.61
GNPNAT1-201ENST00000216410 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
GNPNAT1-201ENST00000216410 ERICH6Q7L0X2 663 aa18.77■□□□□ 0.6
GNPNAT1-201ENST00000216410 CNGB1Q14028 1251 aaPredicted RBP18.71■□□□□ 0.59
GNPNAT1-201ENST00000216410 SOGA1O94964 1423 aa18.7■□□□□ 0.58
GNPNAT1-201ENST00000216410 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
GNPNAT1-201ENST00000216410 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
GNPNAT1-201ENST00000216410 HIRIP3Q9BW71 556 aaPredicted RBP18.64■□□□□ 0.57
GNPNAT1-201ENST00000216410 FKBP8Q14318 412 aa18.63■□□□□ 0.57
GNPNAT1-201ENST00000216410 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
GNPNAT1-201ENST00000216410 DDX10Q13206 875 aaKnown RBP18.61■□□□□ 0.57
GNPNAT1-201ENST00000216410 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
GNPNAT1-201ENST00000216410 TNIKQ9UKE5 1360 aa18.57■□□□□ 0.56
GNPNAT1-201ENST00000216410 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
GNPNAT1-201ENST00000216410 P3H3Q8IVL6 736 aa18.55■□□□□ 0.56
GNPNAT1-201ENST00000216410 CLIP1P30622 1438 aa18.55■□□□□ 0.56
GNPNAT1-201ENST00000216410 SUPT16HQ9Y5B9 1047 aaKnown RBP18.54■□□□□ 0.56
GNPNAT1-201ENST00000216410 WIZO95785 1651 aa18.54■□□□□ 0.56
GNPNAT1-201ENST00000216410 POLR3GLQ9BT43 218 aa18.48■□□□□ 0.55
GNPNAT1-201ENST00000216410 RUSC2Q8N2Y8 1516 aa18.46■□□□□ 0.55
GNPNAT1-201ENST00000216410 ANP32CO43423 234 aa18.44■□□□□ 0.54
GNPNAT1-201ENST00000216410 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
GNPNAT1-201ENST00000216410 IRX6P78412 446 aaPredicted RBP18.41■□□□□ 0.54
GNPNAT1-201ENST00000216410 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
GNPNAT1-201ENST00000216410 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
GNPNAT1-201ENST00000216410 KANK4Q5T7N3 995 aaPredicted RBP18.34■□□□□ 0.53
GNPNAT1-201ENST00000216410 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.53
GNPNAT1-201ENST00000216410 NACADO15069 1562 aa18.33■□□□□ 0.52
GNPNAT1-201ENST00000216410 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
GNPNAT1-201ENST00000216410 ANP32EQ9BTT0 268 aa18.31■□□□□ 0.52
GNPNAT1-201ENST00000216410 TSHZ2Q9NRE2 1034 aa18.3■□□□□ 0.52
GNPNAT1-201ENST00000216410 EEA1Q15075 1411 aa18.29■□□□□ 0.52
GNPNAT1-201ENST00000216410 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
GNPNAT1-201ENST00000216410 CLSPNQ9HAW4 1339 aa18.27■□□□□ 0.52
GNPNAT1-201ENST00000216410 CDK11AQ9UQ88 783 aaPredicted RBP18.25■□□□□ 0.51
GNPNAT1-201ENST00000216410 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
GNPNAT1-201ENST00000216410 ARID3CA6NKF2 412 aa18.22■□□□□ 0.51
GNPNAT1-201ENST00000216410 SENP3-EIF4A1A0A087X0R7 540 aa18.2■□□□□ 0.5
GNPNAT1-201ENST00000216410 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
GNPNAT1-201ENST00000216410 FAM9BQ8IZU0 186 aa18.15■□□□□ 0.5
GNPNAT1-201ENST00000216410 ZNF326Q5BKZ1 582 aaKnown RBP18.13■□□□□ 0.49
GNPNAT1-201ENST00000216410 TONSLQ96HA7 1378 aa18.11■□□□□ 0.49
GNPNAT1-201ENST00000216410 DHX57Q6P158 1386 aaKnown RBP18.1■□□□□ 0.49
GNPNAT1-201ENST00000216410 RBM19Q9Y4C8 960 aaKnown RBP18.1■□□□□ 0.49
GNPNAT1-201ENST00000216410 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
GNPNAT1-201ENST00000216410 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
GNPNAT1-201ENST00000216410 BCL11AQ9H165 835 aa18.08■□□□□ 0.49
GNPNAT1-201ENST00000216410 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
GNPNAT1-201ENST00000216410 CCNB3Q8WWL7 1395 aa18.05■□□□□ 0.48
GNPNAT1-201ENST00000216410 NBR1Q14596 966 aa18.04■□□□□ 0.48
GNPNAT1-201ENST00000216410 BAZ1BQ9UIG0 1483 aaKnown RBP18.01■□□□□ 0.47
GNPNAT1-201ENST00000216410 RAB3GAP2Q9H2M9 1393 aa17.98■□□□□ 0.47
GNPNAT1-201ENST00000216410 RTL5Q5HYW3 569 aaPredicted RBP17.97■□□□□ 0.47
GNPNAT1-201ENST00000216410 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms