RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-211ENST00000479092 NISCHQ9Y2I1 1504 aa28.49■■■□□ 2.15
PTPN7-211ENST00000479092 CCDC180Q9P1Z9 1646 aa25.28■■□□□ 1.64
PTPN7-211ENST00000479092 ABCC9O60706 1549 aa24.56■■□□□ 1.52
PTPN7-211ENST00000479092 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
PTPN7-211ENST00000479092 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
PTPN7-211ENST00000479092 NACADO15069 1562 aa23.73■■□□□ 1.39
PTPN7-211ENST00000479092 RB1CC1Q8TDY2 1594 aa23.73■■□□□ 1.39
PTPN7-211ENST00000479092 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
PTPN7-211ENST00000479092 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
PTPN7-211ENST00000479092 SCRIBQ14160 1630 aa23.1■■□□□ 1.29
PTPN7-211ENST00000479092 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.29
PTPN7-211ENST00000479092 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.26
PTPN7-211ENST00000479092 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
PTPN7-211ENST00000479092 SHROOM4Q9ULL8 1493 aa22.81■■□□□ 1.24
PTPN7-211ENST00000479092 EIF4G1Q04637 1599 aaKnown RBP22.36■■□□□ 1.17
PTPN7-211ENST00000479092 DNAJC5BQ9UF47 199 aa22.25■■□□□ 1.15
PTPN7-211ENST00000479092 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.15
PTPN7-211ENST00000479092 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
PTPN7-211ENST00000479092 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
PTPN7-211ENST00000479092 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
PTPN7-211ENST00000479092 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.1
PTPN7-211ENST00000479092 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
PTPN7-211ENST00000479092 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
PTPN7-211ENST00000479092 NCAPD3P42695 1498 aa21.86■■□□□ 1.09
PTPN7-211ENST00000479092 PEG3Q9GZU2 1588 aa21.86■■□□□ 1.09
PTPN7-211ENST00000479092 HMGXB3Q12766 1538 aa21.82■■□□□ 1.08
PTPN7-211ENST00000479092 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
PTPN7-211ENST00000479092 RSF1Q96T23 1441 aaPredicted RBP21.77■■□□□ 1.08
PTPN7-211ENST00000479092 WIZO95785 1651 aa21.71■■□□□ 1.07
PTPN7-211ENST00000479092 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
PTPN7-211ENST00000479092 SUPT5HO00267 1087 aaKnown RBP21.36■■□□□ 1.01
PTPN7-211ENST00000479092 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
PTPN7-211ENST00000479092 NESP48681 1621 aa21.27■■□□□ 1
PTPN7-211ENST00000479092 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
PTPN7-211ENST00000479092 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
PTPN7-211ENST00000479092 ERCC6Q03468 1493 aa21.21■□□□□ 0.99
PTPN7-211ENST00000479092 CFTRP13569 1480 aa21.16■□□□□ 0.98
PTPN7-211ENST00000479092 PDS5BQ9NTI5 1447 aa21.15■□□□□ 0.98
PTPN7-211ENST00000479092 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
PTPN7-211ENST00000479092 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
PTPN7-211ENST00000479092 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
PTPN7-211ENST00000479092 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
PTPN7-211ENST00000479092 THOC2Q8NI27 1593 aaKnown RBP20.95■□□□□ 0.94
PTPN7-211ENST00000479092 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
PTPN7-211ENST00000479092 CUX2O14529 1486 aa20.89■□□□□ 0.94
PTPN7-211ENST00000479092 WDR62O43379 1518 aa20.84■□□□□ 0.93
PTPN7-211ENST00000479092 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
PTPN7-211ENST00000479092 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
PTPN7-211ENST00000479092 DNMBPQ6XZF7 1577 aa20.71■□□□□ 0.91
PTPN7-211ENST00000479092 TOPBP1Q92547 1522 aa20.69■□□□□ 0.9
PTPN7-211ENST00000479092 CUX1P39880 1505 aa20.6■□□□□ 0.89
PTPN7-211ENST00000479092 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.88
PTPN7-211ENST00000479092 IFT140Q96RY7 1462 aa20.55■□□□□ 0.88
PTPN7-211ENST00000479092 POLA1P09884 1462 aaPredicted RBP20.54■□□□□ 0.88
PTPN7-211ENST00000479092 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
PTPN7-211ENST00000479092 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
PTPN7-211ENST00000479092 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
PTPN7-211ENST00000479092 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
PTPN7-211ENST00000479092 TARBP1Q13395 1621 aaKnown RBP20.44■□□□□ 0.86
PTPN7-211ENST00000479092 SOGA1O94964 1423 aa20.44■□□□□ 0.86
PTPN7-211ENST00000479092 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
PTPN7-211ENST00000479092 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
PTPN7-211ENST00000479092 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
PTPN7-211ENST00000479092 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
PTPN7-211ENST00000479092 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
PTPN7-211ENST00000479092 TDRD9Q8NDG6 1382 aaKnown RBP20.3■□□□□ 0.84
PTPN7-211ENST00000479092 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.841e-7■■■■□ 23
PTPN7-211ENST00000479092 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
PTPN7-211ENST00000479092 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
PTPN7-211ENST00000479092 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
PTPN7-211ENST00000479092 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
PTPN7-211ENST00000479092 SNAPC4Q5SXM2 1469 aa20.18■□□□□ 0.82
PTPN7-211ENST00000479092 PBRM1Q86U86 1689 aa20.17■□□□□ 0.82
PTPN7-211ENST00000479092 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
PTPN7-211ENST00000479092 KIF27Q86VH2 1401 aa20.13■□□□□ 0.81
PTPN7-211ENST00000479092 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
PTPN7-211ENST00000479092 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
PTPN7-211ENST00000479092 FBLN2P98095 1184 aa20.06■□□□□ 0.8
PTPN7-211ENST00000479092 ADAMTS12P58397 1594 aa20.05■□□□□ 0.8
PTPN7-211ENST00000479092 CHD1O14646 1710 aa20.03■□□□□ 0.8
PTPN7-211ENST00000479092 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
PTPN7-211ENST00000479092 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.79
PTPN7-211ENST00000479092 OSCARQ8IYS5 282 aa20.01■□□□□ 0.79
PTPN7-211ENST00000479092 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
PTPN7-211ENST00000479092 CUL7Q14999 1698 aa19.97■□□□□ 0.79
PTPN7-211ENST00000479092 DNAJC5Q9H3Z4 198 aa19.96■□□□□ 0.79
PTPN7-211ENST00000479092 GRIN2AQ12879 1464 aa19.96■□□□□ 0.79
PTPN7-211ENST00000479092 IGF1RP08069 1367 aa19.95■□□□□ 0.78
PTPN7-211ENST00000479092 RUSC2Q8N2Y8 1516 aa19.91■□□□□ 0.78
PTPN7-211ENST00000479092 EEA1Q15075 1411 aa19.87■□□□□ 0.77
PTPN7-211ENST00000479092 CARMIL1Q5VZK9 1371 aa19.87■□□□□ 0.77
PTPN7-211ENST00000479092 NUP160Q12769 1436 aa19.85■□□□□ 0.77
PTPN7-211ENST00000479092 CLASP1Q7Z460 1538 aa19.84■□□□□ 0.77
PTPN7-211ENST00000479092 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
PTPN7-211ENST00000479092 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
PTPN7-211ENST00000479092 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
PTPN7-211ENST00000479092 PRXQ9BXM0 1461 aa19.74■□□□□ 0.75
PTPN7-211ENST00000479092 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
PTPN7-211ENST00000479092 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
PTPN7-211ENST00000479092 KIAA0586Q9BVV6 1533 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms