RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 NISCHQ9Y2I1 1504 aa47.67■■■■■ 5.22
CDC42BPB-206ENST00000559790 CCDC180Q9P1Z9 1646 aa42.89■■■■■ 4.46
CDC42BPB-206ENST00000559790 ABCC9O60706 1549 aa42.51■■■■■ 4.39
CDC42BPB-206ENST00000559790 RB1CC1Q8TDY2 1594 aa40.57■■■■■ 4.09
CDC42BPB-206ENST00000559790 NACADO15069 1562 aa40.34■■■■■ 4.05
CDC42BPB-206ENST00000559790 UNC13AQ9UPW8 1703 aa40.03■■■■■ 4
CDC42BPB-206ENST00000559790 MYO15BQ96JP2 1530 aa39.88■■■■□ 3.97
CDC42BPB-206ENST00000559790 DNAJC5BQ9UF47 199 aa39.76■■■■□ 3.96
CDC42BPB-206ENST00000559790 DCAF8L2P0C7V8 631 aa39.69■■■■□ 3.94
CDC42BPB-206ENST00000559790 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
CDC42BPB-206ENST00000559790 BICRAQ9NZM4 1560 aa39.6■■■■□ 3.93
CDC42BPB-206ENST00000559790 PABPN1Q86U42 306 aaKnown RBP eCLIP39.45■■■■□ 3.91
CDC42BPB-206ENST00000559790 DCAF1Q9Y4B6 1507 aa39.43■■■■□ 3.9
CDC42BPB-206ENST00000559790 SCRIBQ14160 1630 aa38.98■■■■□ 3.83
CDC42BPB-206ENST00000559790 SHROOM4Q9ULL8 1493 aa38.91■■■■□ 3.82
CDC42BPB-206ENST00000559790 CC2D2AQ9P2K1 1620 aa38.54■■■■□ 3.76
CDC42BPB-206ENST00000559790 EIF4G1Q04637 1599 aaKnown RBP38.48■■■■□ 3.75
CDC42BPB-206ENST00000559790 CECR2Q9BXF3 1484 aa38.26■■■■□ 3.72
CDC42BPB-206ENST00000559790 SMARCA4P51532 1647 aa37.25■■■■□ 3.55
CDC42BPB-206ENST00000559790 NCAPD3P42695 1498 aa37.2■■■■□ 3.54
CDC42BPB-206ENST00000559790 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.53
CDC42BPB-206ENST00000559790 HMGXB3Q12766 1538 aa37.05■■■■□ 3.52
CDC42BPB-206ENST00000559790 SMARCA2P51531 1590 aa37.02■■■■□ 3.52
CDC42BPB-206ENST00000559790 BAZ1AQ9NRL2 1556 aaPredicted RBP36.96■■■■□ 3.51
CDC42BPB-206ENST00000559790 PEG3Q9GZU2 1588 aa36.91■■■■□ 3.5
CDC42BPB-206ENST00000559790 MROH2BQ7Z745 1585 aa36.78■■■■□ 3.48
CDC42BPB-206ENST00000559790 BAZ1BQ9UIG0 1483 aaKnown RBP36.72■■■■□ 3.47
CDC42BPB-206ENST00000559790 NESP48681 1621 aa36.66■■■■□ 3.46
CDC42BPB-206ENST00000559790 CUX2O14529 1486 aa36.59■■■■□ 3.45
CDC42BPB-206ENST00000559790 ERCC6Q03468 1493 aa36.56■■■■□ 3.44
CDC42BPB-206ENST00000559790 THOC2Q8NI27 1593 aaKnown RBP36.4■■■■□ 3.42
CDC42BPB-206ENST00000559790 LAMC3Q9Y6N6 1575 aa36.4■■■■□ 3.42
CDC42BPB-206ENST00000559790 WIZO95785 1651 aa36.4■■■■□ 3.42
CDC42BPB-206ENST00000559790 KIF21AQ7Z4S6 1674 aa36.35■■■■□ 3.41
CDC42BPB-206ENST00000559790 DNAJC5Q9H3Z4 198 aa36.27■■■■□ 3.4
CDC42BPB-206ENST00000559790 CADPSQ9ULU8 1353 aa35.99■■■■□ 3.35
CDC42BPB-206ENST00000559790 RSF1Q96T23 1441 aaPredicted RBP35.98■■■■□ 3.35
CDC42BPB-206ENST00000559790 PDS5BQ9NTI5 1447 aa35.98■■■■□ 3.35
CDC42BPB-206ENST00000559790 TOP2AP11388 1531 aaKnown RBP35.89■■■■□ 3.34
CDC42BPB-206ENST00000559790 WDR62O43379 1518 aa35.83■■■■□ 3.33
CDC42BPB-206ENST00000559790 MRC2Q9UBG0 1479 aa35.81■■■■□ 3.32
CDC42BPB-206ENST00000559790 CFTRP13569 1480 aa35.71■■■■□ 3.31
CDC42BPB-206ENST00000559790 PRDM2Q13029 1718 aa35.68■■■■□ 3.3
CDC42BPB-206ENST00000559790 CEP164Q9UPV0 1460 aa35.67■■■■□ 3.3
CDC42BPB-206ENST00000559790 FANCD2Q9BXW9 1451 aa35.65■■■■□ 3.3
CDC42BPB-206ENST00000559790 URB2Q14146 1524 aaKnown RBP35.46■■■■□ 3.27
CDC42BPB-206ENST00000559790 CCDC88BA6NC98 1476 aa35.4■■■■□ 3.26
CDC42BPB-206ENST00000559790 TOPBP1Q92547 1522 aa35.06■■■■□ 3.2
CDC42BPB-206ENST00000559790 DNMBPQ6XZF7 1577 aa34.97■■■■□ 3.19
CDC42BPB-206ENST00000559790 ZNF608Q9ULD9 1512 aaPredicted RBP34.96■■■■□ 3.19
CDC42BPB-206ENST00000559790 IFT140Q96RY7 1462 aa34.93■■■■□ 3.18
CDC42BPB-206ENST00000559790 EIF4G3O43432 1585 aaKnown RBP34.87■■■■□ 3.17
CDC42BPB-206ENST00000559790 TARBP1Q13395 1621 aaKnown RBP34.86■■■■□ 3.17
CDC42BPB-206ENST00000559790 ABCC8Q09428 1581 aa34.83■■■■□ 3.17
CDC42BPB-206ENST00000559790 POLA1P09884 1462 aaPredicted RBP34.71■■■■□ 3.15
CDC42BPB-206ENST00000559790 OSCARQ8IYS5 282 aa34.68■■■■□ 3.14
CDC42BPB-206ENST00000559790 CHD1O14646 1710 aa34.67■■■■□ 3.14
CDC42BPB-206ENST00000559790 TRIM41Q8WV44 630 aa34.61■■■■□ 3.13
CDC42BPB-206ENST00000559790 RIMBP3CA6NJZ7 1639 aa34.61■■■■□ 3.13
CDC42BPB-206ENST00000559790 RIMBP3BA6NNM3 1639 aa34.61■■■■□ 3.13
CDC42BPB-206ENST00000559790 RIMBP3Q9UFD9 1639 aa34.61■■■■□ 3.13
CDC42BPB-206ENST00000559790 CUX1P39880 1505 aa34.56■■■■□ 3.12
CDC42BPB-206ENST00000559790 AQRO60306 1485 aaKnown RBP eCLIP34.56■■■■□ 3.12
CDC42BPB-206ENST00000559790 RAD54L2Q9Y4B4 1467 aa34.53■■■■□ 3.12
CDC42BPB-206ENST00000559790 WDR97A6NE52 1622 aa34.51■■■■□ 3.11
CDC42BPB-206ENST00000559790 FGD5Q6ZNL6 1462 aa34.49■■■■□ 3.11
CDC42BPB-206ENST00000559790 ARHGEF11O15085 1522 aa34.44■■■■□ 3.1
CDC42BPB-206ENST00000559790 SOGA1O94964 1423 aa34.38■■■■□ 3.09
CDC42BPB-206ENST00000559790 TDRD9Q8NDG6 1382 aaKnown RBP34.31■■■■□ 3.08
CDC42BPB-206ENST00000559790 PBRM1Q86U86 1689 aa34.28■■■■□ 3.08
CDC42BPB-206ENST00000559790 SNAPC4Q5SXM2 1469 aa34.27■■■■□ 3.08
CDC42BPB-206ENST00000559790 CLASP1Q7Z460 1538 aa34.2■■■■□ 3.07
CDC42BPB-206ENST00000559790 ABCA5Q8WWZ7 1642 aa34.2■■■■□ 3.07
CDC42BPB-206ENST00000559790 SUPT5HO00267 1087 aaKnown RBP34.17■■■■□ 3.06
CDC42BPB-206ENST00000559790 MAGI1Q96QZ7 1491 aaPredicted RBP34.17■■■■□ 3.06
CDC42BPB-206ENST00000559790 ARAP1Q96P48 1450 aa34.14■■■■□ 3.06
CDC42BPB-206ENST00000559790 GRIN2BQ13224 1484 aa34.14■■■■□ 3.06
CDC42BPB-206ENST00000559790 BIVM-ERCC5R4GMW8 1640 aa34.13■■■■□ 3.05
CDC42BPB-206ENST00000559790 ABCA10Q8WWZ4 1543 aa34.11■■■■□ 3.05
CDC42BPB-206ENST00000559790 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
CDC42BPB-206ENST00000559790 TOP2BQ02880 1626 aa34.04■■■■□ 3.04
CDC42BPB-206ENST00000559790 SYNJ2O15056 1496 aa34.04■■■■□ 3.04
CDC42BPB-206ENST00000559790 GAPVD1Q14C86 1478 aa34.03■■■■□ 3.04
CDC42BPB-206ENST00000559790 FBLN2P98095 1184 aa34.02■■■■□ 3.04
CDC42BPB-206ENST00000559790 ADAMTS12P58397 1594 aa33.9■■■■□ 3.02
CDC42BPB-206ENST00000559790 CYB5RLQ6IPT4 315 aa33.87■■■■□ 3.01
CDC42BPB-206ENST00000559790 WRNQ14191 1432 aaPredicted RBP eCLIP33.87■■■■□ 3.01
CDC42BPB-206ENST00000559790 CHMP7Q8WUX9 453 aaPredicted RBP33.83■■■■□ 3.01
CDC42BPB-206ENST00000559790 GRIN2AQ12879 1464 aa33.76■■■■□ 3
CDC42BPB-206ENST00000559790 CEP170Q5SW79 1584 aa33.76■■■□□ 2.99
CDC42BPB-206ENST00000559790 ERCC6L2Q5T890 1561 aa33.69■■■□□ 2.98
CDC42BPB-206ENST00000559790 NUP160Q12769 1436 aa33.68■■■□□ 2.98
CDC42BPB-206ENST00000559790 ERICH3Q5RHP9 1530 aa33.68■■■□□ 2.98
CDC42BPB-206ENST00000559790 SHROOM2Q13796 1616 aa33.67■■■□□ 2.98
CDC42BPB-206ENST00000559790 FHAD1B1AJZ9 1412 aa33.59■■■□□ 2.97
CDC42BPB-206ENST00000559790 RUSC2Q8N2Y8 1516 aa33.44■■■□□ 2.94
CDC42BPB-206ENST00000559790 TRHP20396 242 aaPredicted RBP33.34■■■□□ 2.93
CDC42BPB-206ENST00000559790 CUL7Q14999 1698 aa33.29■■■□□ 2.92
CDC42BPB-206ENST00000559790 PRG4Q92954 1404 aaPredicted RBP33.2■■■□□ 2.91
CDC42BPB-206ENST00000559790 KIF13AQ9H1H9 1805 aa33.2■■■□□ 2.91
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