RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 DCAF8L2P0C7V8 631 aa27.42■■□□□ 1.98
LRRFIP1-201ENST00000244815 NISCHQ9Y2I1 1504 aa27.14■■□□□ 1.94
LRRFIP1-201ENST00000244815 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
LRRFIP1-201ENST00000244815 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
LRRFIP1-201ENST00000244815 EHMT2Q96KQ7 1210 aa25.55■■□□□ 1.68
LRRFIP1-201ENST00000244815 PCGF6Q9BYE7 350 aa25.3■■□□□ 1.64
LRRFIP1-201ENST00000244815 FAM9AQ8IZU1 332 aaPredicted RBP25.09■■□□□ 1.61
LRRFIP1-201ENST00000244815 APLP2Q06481 763 aa24.79■■□□□ 1.56
LRRFIP1-201ENST00000244815 PELP1Q8IZL8 1130 aaKnown RBP24.77■■□□□ 1.56
LRRFIP1-201ENST00000244815 TTBK1Q5TCY1 1321 aaPredicted RBP24.74■■□□□ 1.55
LRRFIP1-201ENST00000244815 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
LRRFIP1-201ENST00000244815 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.54
LRRFIP1-201ENST00000244815 CCER1Q8TC90 406 aaPredicted RBP24.49■■□□□ 1.51
LRRFIP1-201ENST00000244815 CENPBP07199 599 aaPredicted RBP24.45■■□□□ 1.51
LRRFIP1-201ENST00000244815 HRCP23327 699 aa24.33■■□□□ 1.49
LRRFIP1-201ENST00000244815 RANGAP1P46060 587 aaPredicted RBP24.28■■□□□ 1.48
LRRFIP1-201ENST00000244815 TRIM26Q12899 539 aaPredicted RBP24.21■■□□□ 1.47
LRRFIP1-201ENST00000244815 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
LRRFIP1-201ENST00000244815 UBTFP17480 764 aaKnown RBP24.18■■□□□ 1.46
LRRFIP1-201ENST00000244815 PPARGC1BQ86YN6 1023 aaKnown RBP24.16■■□□□ 1.46
LRRFIP1-201ENST00000244815 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
LRRFIP1-201ENST00000244815 YTHDC1Q96MU7 727 aaKnown RBP23.98■■□□□ 1.43
LRRFIP1-201ENST00000244815 ATP1B4Q9UN42 357 aaPredicted RBP23.86■■□□□ 1.41
LRRFIP1-201ENST00000244815 ERICH6Q7L0X2 663 aa23.73■■□□□ 1.39
LRRFIP1-201ENST00000244815 NEFLP07196 543 aa23.64■■□□□ 1.38
LRRFIP1-201ENST00000244815 MYT1Q01538 1121 aa23.61■■□□□ 1.37
LRRFIP1-201ENST00000244815 HNRNPUL2Q1KMD3 747 aaKnown RBP23.51■■□□□ 1.35
LRRFIP1-201ENST00000244815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.5■■□□□ 1.35
LRRFIP1-201ENST00000244815 ITGAEP38570 1179 aa23.43■■□□□ 1.34
LRRFIP1-201ENST00000244815 DIEXFQ68CQ4 756 aaKnown RBP23.36■■□□□ 1.33
LRRFIP1-201ENST00000244815 GTF3C3Q9Y5Q9 886 aa23.03■■□□□ 1.28
LRRFIP1-201ENST00000244815 POLR3GLQ9BT43 218 aa22.98■■□□□ 1.27
LRRFIP1-201ENST00000244815 CNGB1Q14028 1251 aaPredicted RBP22.89■■□□□ 1.26
LRRFIP1-201ENST00000244815 ZNF316A6NFI3 1004 aaPredicted RBP22.83■■□□□ 1.24
LRRFIP1-201ENST00000244815 FAM50AQ14320 339 aaKnown RBP22.79■■□□□ 1.24
LRRFIP1-201ENST00000244815 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
LRRFIP1-201ENST00000244815 ABCC9O60706 1549 aa22.78■■□□□ 1.24
LRRFIP1-201ENST00000244815 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
LRRFIP1-201ENST00000244815 NEUROD1Q13562 356 aa22.73■■□□□ 1.23
LRRFIP1-201ENST00000244815 DAXXQ9UER7 740 aaPredicted RBP22.69■■□□□ 1.22
LRRFIP1-201ENST00000244815 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
LRRFIP1-201ENST00000244815 BCANQ96GW7 911 aa22.67■■□□□ 1.22
LRRFIP1-201ENST00000244815 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
LRRFIP1-201ENST00000244815 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
LRRFIP1-201ENST00000244815 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
LRRFIP1-201ENST00000244815 ANP32CO43423 234 aa22.53■■□□□ 1.2
LRRFIP1-201ENST00000244815 MYT1LQ9UL68 1186 aa22.53■■□□□ 1.2
LRRFIP1-201ENST00000244815 RTL5Q5HYW3 569 aaPredicted RBP22.44■■□□□ 1.18
LRRFIP1-201ENST00000244815 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
LRRFIP1-201ENST00000244815 CDK11AQ9UQ88 783 aaPredicted RBP22.35■■□□□ 1.17
LRRFIP1-201ENST00000244815 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
LRRFIP1-201ENST00000244815 ZNF326Q5BKZ1 582 aaKnown RBP22.3■■□□□ 1.16
LRRFIP1-201ENST00000244815 CLSPNQ9HAW4 1339 aa22.3■■□□□ 1.16
LRRFIP1-201ENST00000244815 SCAF1Q9H7N4 1312 aaKnown RBP22.29■■□□□ 1.16
LRRFIP1-201ENST00000244815 SLC4A1APQ9BWU0 796 aaKnown RBP22.24■■□□□ 1.15
LRRFIP1-201ENST00000244815 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
LRRFIP1-201ENST00000244815 FKBP8Q14318 412 aa22.15■■□□□ 1.14
LRRFIP1-201ENST00000244815 DDX10Q13206 875 aaKnown RBP22.13■■□□□ 1.13
LRRFIP1-201ENST00000244815 MIER1Q8N108 512 aa22.11■■□□□ 1.13
LRRFIP1-201ENST00000244815 ARID3CA6NKF2 412 aa22.08■■□□□ 1.12
LRRFIP1-201ENST00000244815 TONSLQ96HA7 1378 aa22.01■■□□□ 1.11
LRRFIP1-201ENST00000244815 HNRNPUQ00839 825 aaKnown RBP eCLIP22■■□□□ 1.11
LRRFIP1-201ENST00000244815 FBLN2P98095 1184 aa21.97■■□□□ 1.11
LRRFIP1-201ENST00000244815 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
LRRFIP1-201ENST00000244815 ANP32AP39687 249 aaKnown RBP21.92■■□□□ 1.1
LRRFIP1-201ENST00000244815 CLIP1P30622 1438 aa21.89■■□□□ 1.09
LRRFIP1-201ENST00000244815 ZNF777Q9ULD5 760 aaPredicted RBP21.88■■□□□ 1.09
LRRFIP1-201ENST00000244815 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
LRRFIP1-201ENST00000244815 FAM9BQ8IZU0 186 aa21.87■■□□□ 1.09
LRRFIP1-201ENST00000244815 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
LRRFIP1-201ENST00000244815 HIRIP3Q9BW71 556 aaPredicted RBP21.82■■□□□ 1.08
LRRFIP1-201ENST00000244815 NPM2Q86SE8 214 aaKnown RBP21.81■■□□□ 1.08
LRRFIP1-201ENST00000244815 CHIC2Q9UKJ5 165 aa21.78■■□□□ 1.08
LRRFIP1-201ENST00000244815 CANXP27824 592 aaKnown RBP21.77■■□□□ 1.08
LRRFIP1-201ENST00000244815 EEA1Q15075 1411 aa21.73■■□□□ 1.07
LRRFIP1-201ENST00000244815 MRS2Q9HD23 443 aa21.69■■□□□ 1.06
LRRFIP1-201ENST00000244815 SALL2Q9Y467 1007 aaPredicted RBP21.69■■□□□ 1.06
LRRFIP1-201ENST00000244815 GOLGA3Q08378 1498 aa21.68■■□□□ 1.06
LRRFIP1-201ENST00000244815 IRX6P78412 446 aaPredicted RBP21.67■■□□□ 1.06
LRRFIP1-201ENST00000244815 TNIKQ9UKE5 1360 aa21.67■■□□□ 1.06
LRRFIP1-201ENST00000244815 CCDC136Q96JN2 1154 aa21.66■■□□□ 1.06
LRRFIP1-201ENST00000244815 TMC1Q8TDI8 760 aa21.65■■□□□ 1.06
LRRFIP1-201ENST00000244815 ZBTB47Q9UFB7 747 aaPredicted RBP21.65■■□□□ 1.06
LRRFIP1-201ENST00000244815 BCL11AQ9H165 835 aa21.63■■□□□ 1.05
LRRFIP1-201ENST00000244815 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
LRRFIP1-201ENST00000244815 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
LRRFIP1-201ENST00000244815 EIF4G2P78344 907 aaKnown RBP eCLIP21.56■■□□□ 1.04
LRRFIP1-201ENST00000244815 NBR1Q14596 966 aa21.54■■□□□ 1.04
LRRFIP1-201ENST00000244815 NEFMP07197 916 aa21.52■■□□□ 1.04
LRRFIP1-201ENST00000244815 RRP7BPQ9NSQ0 103 aa21.52■■□□□ 1.04
LRRFIP1-201ENST00000244815 KDM2AQ9Y2K7 1162 aa21.49■■□□□ 1.03
LRRFIP1-201ENST00000244815 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
LRRFIP1-201ENST00000244815 RB1CC1Q8TDY2 1594 aa21.45■■□□□ 1.02
LRRFIP1-201ENST00000244815 SIN3AQ96ST3 1273 aa21.43■■□□□ 1.02
LRRFIP1-201ENST00000244815 TSPY4P0CV99 314 aa21.43■■□□□ 1.02
LRRFIP1-201ENST00000244815 TSPY10P0CW01 314 aa21.43■■□□□ 1.02
LRRFIP1-201ENST00000244815 SUPT16HQ9Y5B9 1047 aaKnown RBP21.43■■□□□ 1.02
LRRFIP1-201ENST00000244815 CECR2Q9BXF3 1484 aa21.42■■□□□ 1.02
LRRFIP1-201ENST00000244815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.42■■□□□ 1.022e-7■■□□□ 12.8
LRRFIP1-201ENST00000244815 EIF5BO60841 1220 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms