RNA–Protein interactions for RNA: ENST00000557604.1

GNPNAT1-205, Transcript of glucosamine-phosphate N-acetyltransferase 1, humanhuman

TSL 3

Gene GNPNAT1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPNAT1-205ENST00000557604 NISCHQ9Y2I1 1504 aa53.25■■■■■ 6.11
GNPNAT1-205ENST00000557604 CCDC180Q9P1Z9 1646 aa47.33■■■■■ 5.17
GNPNAT1-205ENST00000557604 ABCC9O60706 1549 aa46.49■■■■■ 5.03
GNPNAT1-205ENST00000557604 RB1CC1Q8TDY2 1594 aa44.68■■■■■ 4.74
GNPNAT1-205ENST00000557604 DCAF8L2P0C7V8 631 aa44.66■■■■■ 4.74
GNPNAT1-205ENST00000557604 NACADO15069 1562 aa44.61■■■■■ 4.73
GNPNAT1-205ENST00000557604 MYO15BQ96JP2 1530 aa44.33■■■■■ 4.69
GNPNAT1-205ENST00000557604 ZCCHC6Q5VYS8 1495 aaKnown RBP44.32■■■■■ 4.69
GNPNAT1-205ENST00000557604 DCAF1Q9Y4B6 1507 aa44.08■■■■■ 4.65
GNPNAT1-205ENST00000557604 PABPN1Q86U42 306 aaKnown RBP eCLIP43.47■■■■■ 4.55
GNPNAT1-205ENST00000557604 UNC13AQ9UPW8 1703 aa43.44■■■■■ 4.54
GNPNAT1-205ENST00000557604 BICRAQ9NZM4 1560 aa43.24■■■■■ 4.51
GNPNAT1-205ENST00000557604 SCRIBQ14160 1630 aa43.18■■■■■ 4.5
GNPNAT1-205ENST00000557604 SHROOM4Q9ULL8 1493 aa42.92■■■■■ 4.46
GNPNAT1-205ENST00000557604 DNAJC5BQ9UF47 199 aa42.77■■■■■ 4.44
GNPNAT1-205ENST00000557604 EIF4G1Q04637 1599 aaKnown RBP42.16■■■■■ 4.34
GNPNAT1-205ENST00000557604 CC2D2AQ9P2K1 1620 aa42■■■■■ 4.31
GNPNAT1-205ENST00000557604 CECR2Q9BXF3 1484 aa41.82■■■■■ 4.29
GNPNAT1-205ENST00000557604 BAZ1AQ9NRL2 1556 aaPredicted RBP41.3■■■■■ 4.2
GNPNAT1-205ENST00000557604 SMARCA4P51532 1647 aa41.29■■■■■ 4.2
GNPNAT1-205ENST00000557604 NCAPD3P42695 1498 aa41.19■■■■■ 4.18
GNPNAT1-205ENST00000557604 ATAD2BQ9ULI0 1458 aa41.17■■■■■ 4.18
GNPNAT1-205ENST00000557604 SMARCA2P51531 1590 aa41.12■■■■■ 4.17
GNPNAT1-205ENST00000557604 MROH2BQ7Z745 1585 aa41■■■■■ 4.15
GNPNAT1-205ENST00000557604 HMGXB3Q12766 1538 aa40.93■■■■■ 4.14
GNPNAT1-205ENST00000557604 PEG3Q9GZU2 1588 aa40.92■■■■■ 4.14
GNPNAT1-205ENST00000557604 BAZ1BQ9UIG0 1483 aaKnown RBP40.84■■■■■ 4.13
GNPNAT1-205ENST00000557604 RSF1Q96T23 1441 aaPredicted RBP40.55■■■■■ 4.08
GNPNAT1-205ENST00000557604 WIZO95785 1651 aa40.5■■■■■ 4.07
GNPNAT1-205ENST00000557604 NESP48681 1621 aa40.16■■■■■ 4.02
GNPNAT1-205ENST00000557604 ERCC6Q03468 1493 aa40.14■■■■■ 4.02
GNPNAT1-205ENST00000557604 TOP2AP11388 1531 aaKnown RBP40.14■■■■■ 4.02
GNPNAT1-205ENST00000557604 LAMC3Q9Y6N6 1575 aa40.08■■■■■ 4.01
GNPNAT1-205ENST00000557604 CADPSQ9ULU8 1353 aa40■■■■□ 3.99
GNPNAT1-205ENST00000557604 PDS5BQ9NTI5 1447 aa39.91■■■■□ 3.98
GNPNAT1-205ENST00000557604 CUX2O14529 1486 aa39.75■■■■□ 3.95
GNPNAT1-205ENST00000557604 CFTRP13569 1480 aa39.71■■■■□ 3.95
GNPNAT1-205ENST00000557604 CCDC88BA6NC98 1476 aa39.68■■■■□ 3.94
GNPNAT1-205ENST00000557604 KIF21AQ7Z4S6 1674 aa39.59■■■■□ 3.93
GNPNAT1-205ENST00000557604 THOC2Q8NI27 1593 aaKnown RBP39.54■■■■□ 3.92
GNPNAT1-205ENST00000557604 FANCD2Q9BXW9 1451 aa39.51■■■■□ 3.92
GNPNAT1-205ENST00000557604 SUPT5HO00267 1087 aaKnown RBP39.49■■■■□ 3.91
GNPNAT1-205ENST00000557604 CEP164Q9UPV0 1460 aa39.49■■■■□ 3.91
GNPNAT1-205ENST00000557604 MRC2Q9UBG0 1479 aa39.44■■■■□ 3.9
GNPNAT1-205ENST00000557604 WDR62O43379 1518 aa39.27■■■■□ 3.88
GNPNAT1-205ENST00000557604 PRDM2Q13029 1718 aa39.2■■■■□ 3.87
GNPNAT1-205ENST00000557604 URB2Q14146 1524 aaKnown RBP39.08■■■■□ 3.85
GNPNAT1-205ENST00000557604 ABCC8Q09428 1581 aa38.91■■■■□ 3.82
GNPNAT1-205ENST00000557604 TOPBP1Q92547 1522 aa38.84■■■■□ 3.81
GNPNAT1-205ENST00000557604 DNMBPQ6XZF7 1577 aa38.78■■■■□ 3.8
GNPNAT1-205ENST00000557604 DNAJC5Q9H3Z4 198 aa38.69■■■■□ 3.78
GNPNAT1-205ENST00000557604 IFT140Q96RY7 1462 aa38.67■■■■□ 3.78
GNPNAT1-205ENST00000557604 POLA1P09884 1462 aaPredicted RBP38.51■■■■□ 3.76
GNPNAT1-205ENST00000557604 CUX1P39880 1505 aa38.48■■■■□ 3.75
GNPNAT1-205ENST00000557604 ZNF608Q9ULD9 1512 aaPredicted RBP38.44■■■■□ 3.74
GNPNAT1-205ENST00000557604 SOGA1O94964 1423 aa38.4■■■■□ 3.74
GNPNAT1-205ENST00000557604 FGD5Q6ZNL6 1462 aa38.4■■■■□ 3.74
GNPNAT1-205ENST00000557604 TARBP1Q13395 1621 aaKnown RBP38.37■■■■□ 3.73
GNPNAT1-205ENST00000557604 RAD54L2Q9Y4B4 1467 aa38.34■■■■□ 3.73
GNPNAT1-205ENST00000557604 WRNQ14191 1432 aaPredicted RBP eCLIP38.27■■■■□ 3.72
GNPNAT1-205ENST00000557604 EIF4G3O43432 1585 aaKnown RBP38.25■■■■□ 3.71
GNPNAT1-205ENST00000557604 AQRO60306 1485 aaKnown RBP eCLIP38.25■■■■□ 3.715e-11■■□□□ 13.4
GNPNAT1-205ENST00000557604 TDRD9Q8NDG6 1382 aaKnown RBP38.19■■■■□ 3.7
GNPNAT1-205ENST00000557604 OSCARQ8IYS5 282 aa38.16■■■■□ 3.7
GNPNAT1-205ENST00000557604 WDR97A6NE52 1622 aa38.12■■■■□ 3.69
GNPNAT1-205ENST00000557604 TOP2BQ02880 1626 aa38.12■■■■□ 3.69
GNPNAT1-205ENST00000557604 BIVM-ERCC5R4GMW8 1640 aa38.08■■■■□ 3.69
GNPNAT1-205ENST00000557604 SYNJ1O43426 1573 aa38.06■■■■□ 3.68
GNPNAT1-205ENST00000557604 ABCA10Q8WWZ4 1543 aa38.03■■■■□ 3.68
GNPNAT1-205ENST00000557604 GRIN2BQ13224 1484 aa37.96■■■■□ 3.67
GNPNAT1-205ENST00000557604 GAPVD1Q14C86 1478 aa37.94■■■■□ 3.66
GNPNAT1-205ENST00000557604 FBLN2P98095 1184 aa37.9■■■■□ 3.66
GNPNAT1-205ENST00000557604 SNAPC4Q5SXM2 1469 aa37.88■■■■□ 3.65
GNPNAT1-205ENST00000557604 MAGI1Q96QZ7 1491 aaPredicted RBP37.86■■■■□ 3.65
GNPNAT1-205ENST00000557604 ABCA5Q8WWZ7 1642 aa37.82■■■■□ 3.64
GNPNAT1-205ENST00000557604 CHMP7Q8WUX9 453 aaPredicted RBP37.79■■■■□ 3.64
GNPNAT1-205ENST00000557604 CHD1O14646 1710 aa37.72■■■■□ 3.63
GNPNAT1-205ENST00000557604 PBRM1Q86U86 1689 aa37.72■■■■□ 3.63
GNPNAT1-205ENST00000557604 SYNJ2O15056 1496 aa37.71■■■■□ 3.63
GNPNAT1-205ENST00000557604 ERICH3Q5RHP9 1530 aa37.58■■■■□ 3.61
GNPNAT1-205ENST00000557604 FHAD1B1AJZ9 1412 aa37.52■■■■□ 3.6
GNPNAT1-205ENST00000557604 KIF27Q86VH2 1401 aa37.51■■■■□ 3.59
GNPNAT1-205ENST00000557604 ADAMTS12P58397 1594 aa37.48■■■■□ 3.59
GNPNAT1-205ENST00000557604 GRIN2AQ12879 1464 aa37.45■■■■□ 3.59
GNPNAT1-205ENST00000557604 ARHGEF11O15085 1522 aa37.41■■■■□ 3.58
GNPNAT1-205ENST00000557604 CLASP1Q7Z460 1538 aa37.4■■■■□ 3.58
GNPNAT1-205ENST00000557604 TRIM41Q8WV44 630 aa37.38■■■■□ 3.57
GNPNAT1-205ENST00000557604 RIMBP3CA6NJZ7 1639 aa37.38■■■■□ 3.57
GNPNAT1-205ENST00000557604 RIMBP3BA6NNM3 1639 aa37.38■■■■□ 3.57
GNPNAT1-205ENST00000557604 RIMBP3Q9UFD9 1639 aa37.38■■■■□ 3.57
GNPNAT1-205ENST00000557604 IGF1RP08069 1367 aa37.34■■■■□ 3.57
GNPNAT1-205ENST00000557604 NUP160Q12769 1436 aa37.28■■■■□ 3.56
GNPNAT1-205ENST00000557604 CEP170Q5SW79 1584 aa37.19■■■■□ 3.54
GNPNAT1-205ENST00000557604 CUL7Q14999 1698 aa37.17■■■■□ 3.54
GNPNAT1-205ENST00000557604 CYB5RLQ6IPT4 315 aa37.16■■■■□ 3.54
GNPNAT1-205ENST00000557604 CARMIL1Q5VZK9 1371 aa37.15■■■■□ 3.54
GNPNAT1-205ENST00000557604 ARAP1Q96P48 1450 aa37.09■■■■□ 3.53
GNPNAT1-205ENST00000557604 RUSC2Q8N2Y8 1516 aa37.01■■■■□ 3.52
GNPNAT1-205ENST00000557604 JPH4Q96JJ6 628 aa36.97■■■■□ 3.51
GNPNAT1-205ENST00000557604 SHROOM2Q13796 1616 aa36.93■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms