RNA–Protein interactions for RNA: ENST00000587557.5

ZNF559-206, Transcript of zinc finger protein 559, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF559, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-206ENST00000587557 NISCHQ9Y2I1 1504 aa21.23■□□□□ 0.99
ZNF559-206ENST00000587557 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
ZNF559-206ENST00000587557 CCDC180Q9P1Z9 1646 aa18.07■□□□□ 0.48
ZNF559-206ENST00000587557 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
ZNF559-206ENST00000587557 SUPT5HO00267 1087 aaKnown RBP17.77■□□□□ 0.44
ZNF559-206ENST00000587557 DCAF8L2P0C7V8 631 aa17.7■□□□□ 0.42
ZNF559-206ENST00000587557 DCAF1Q9Y4B6 1507 aa17.41■□□□□ 0.38
ZNF559-206ENST00000587557 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
ZNF559-206ENST00000587557 ABCC9O60706 1549 aa17.21■□□□□ 0.34
ZNF559-206ENST00000587557 SLC24A1O60721 1099 aa17.16■□□□□ 0.34
ZNF559-206ENST00000587557 PELP1Q8IZL8 1130 aaKnown RBP17.12■□□□□ 0.33
ZNF559-206ENST00000587557 MYO15BQ96JP2 1530 aa17.1■□□□□ 0.33
ZNF559-206ENST00000587557 PRKCSHP14314 528 aaPredicted RBP16.98■□□□□ 0.31
ZNF559-206ENST00000587557 MYT1Q01538 1121 aa16.94■□□□□ 0.3
ZNF559-206ENST00000587557 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
ZNF559-206ENST00000587557 NACADO15069 1562 aa16.82■□□□□ 0.28
ZNF559-206ENST00000587557 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
ZNF559-206ENST00000587557 LOC105371045A0A1W2PR82 267 aa16.72■□□□□ 0.27
ZNF559-206ENST00000587557 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
ZNF559-206ENST00000587557 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
ZNF559-206ENST00000587557 HRCP23327 699 aa16.65■□□□□ 0.26
ZNF559-206ENST00000587557 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
ZNF559-206ENST00000587557 CECR2Q9BXF3 1484 aa16.56■□□□□ 0.24
ZNF559-206ENST00000587557 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
ZNF559-206ENST00000587557 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
ZNF559-206ENST00000587557 FAM9AQ8IZU1 332 aaPredicted RBP16.42■□□□□ 0.22
ZNF559-206ENST00000587557 TTBK1Q5TCY1 1321 aaPredicted RBP16.41■□□□□ 0.22
ZNF559-206ENST00000587557 WIZO95785 1651 aa16.39■□□□□ 0.21
ZNF559-206ENST00000587557 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
ZNF559-206ENST00000587557 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
ZNF559-206ENST00000587557 BAZ1AQ9NRL2 1556 aaPredicted RBP16.32■□□□□ 0.2
ZNF559-206ENST00000587557 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
ZNF559-206ENST00000587557 APLP2Q06481 763 aa16.28■□□□□ 0.2
ZNF559-206ENST00000587557 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
ZNF559-206ENST00000587557 BICRAQ9NZM4 1560 aa16.25■□□□□ 0.19
ZNF559-206ENST00000587557 ERICH6Q7L0X2 663 aa16.21■□□□□ 0.19
ZNF559-206ENST00000587557 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
ZNF559-206ENST00000587557 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
ZNF559-206ENST00000587557 EIF4G1Q04637 1599 aaKnown RBP16.12■□□□□ 0.17
ZNF559-206ENST00000587557 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
ZNF559-206ENST00000587557 SMARCA2P51531 1590 aa16.05■□□□□ 0.16
ZNF559-206ENST00000587557 ZEB1P37275 1124 aaPredicted RBP16.03■□□□□ 0.16
ZNF559-206ENST00000587557 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
ZNF559-206ENST00000587557 BCL11AQ9H165 835 aa15.99■□□□□ 0.15
ZNF559-206ENST00000587557 DAXXQ9UER7 740 aaPredicted RBP15.96■□□□□ 0.15
ZNF559-206ENST00000587557 SOGA1O94964 1423 aa15.89■□□□□ 0.13
ZNF559-206ENST00000587557 PEG3Q9GZU2 1588 aa15.84■□□□□ 0.13
ZNF559-206ENST00000587557 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
ZNF559-206ENST00000587557 EEA1Q15075 1411 aa15.83■□□□□ 0.13
ZNF559-206ENST00000587557 CEP162Q5TB80 1403 aa15.81■□□□□ 0.12
ZNF559-206ENST00000587557 ATAD2BQ9ULI0 1458 aa15.81■□□□□ 0.12
ZNF559-206ENST00000587557 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
ZNF559-206ENST00000587557 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
ZNF559-206ENST00000587557 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
ZNF559-206ENST00000587557 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
ZNF559-206ENST00000587557 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
ZNF559-206ENST00000587557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
ZNF559-206ENST00000587557 CCER1Q8TC90 406 aaPredicted RBP15.72■□□□□ 0.11
ZNF559-206ENST00000587557 GOLGA3Q08378 1498 aa15.71■□□□□ 0.11
ZNF559-206ENST00000587557 SYNJ1O43426 1573 aa15.68■□□□□ 0.1
ZNF559-206ENST00000587557 PLEKHG5O94827 1062 aa15.63■□□□□ 0.09
ZNF559-206ENST00000587557 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
ZNF559-206ENST00000587557 EIF5BO60841 1220 aaKnown RBP15.61■□□□□ 0.09
ZNF559-206ENST00000587557 KIF21BO75037 1637 aa15.58■□□□□ 0.08
ZNF559-206ENST00000587557 NCAPD3P42695 1498 aa15.57■□□□□ 0.08
ZNF559-206ENST00000587557 CLIP1P30622 1438 aa15.55■□□□□ 0.08
ZNF559-206ENST00000587557 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
ZNF559-206ENST00000587557 RAPGEF2Q9Y4G8 1499 aa15.5■□□□□ 0.07
ZNF559-206ENST00000587557 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
ZNF559-206ENST00000587557 RANGAP1P46060 587 aaPredicted RBP15.49■□□□□ 0.07
ZNF559-206ENST00000587557 CC2D2AQ9P2K1 1620 aa15.47■□□□□ 0.07
ZNF559-206ENST00000587557 VPS8Q8N3P4 1428 aa15.46■□□□□ 0.07
ZNF559-206ENST00000587557 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
ZNF559-206ENST00000587557 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
ZNF559-206ENST00000587557 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
ZNF559-206ENST00000587557 DIEXFQ68CQ4 756 aaKnown RBP15.36■□□□□ 0.05
ZNF559-206ENST00000587557 CUX1P39880 1505 aa15.35■□□□□ 0.05
ZNF559-206ENST00000587557 PRXQ9BXM0 1461 aa15.35■□□□□ 0.05
ZNF559-206ENST00000587557 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
ZNF559-206ENST00000587557 CFTRP13569 1480 aa15.34■□□□□ 0.05
ZNF559-206ENST00000587557 KIF27Q86VH2 1401 aa15.33■□□□□ 0.04
ZNF559-206ENST00000587557 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
ZNF559-206ENST00000587557 PLPPR3Q6T4P5 718 aa15.28■□□□□ 0.04
ZNF559-206ENST00000587557 ZNF316A6NFI3 1004 aaPredicted RBP15.26■□□□□ 0.03
ZNF559-206ENST00000587557 ARAP1Q96P48 1450 aa15.26■□□□□ 0.03
ZNF559-206ENST00000587557 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
ZNF559-206ENST00000587557 KANK4Q5T7N3 995 aaPredicted RBP15.2■□□□□ 0.02
ZNF559-206ENST00000587557 ACIN1Q9UKV3 1341 aaKnown RBP15.2■□□□□ 0.02
ZNF559-206ENST00000587557 NESP48681 1621 aa15.19■□□□□ 0.02
ZNF559-206ENST00000587557 CUX2O14529 1486 aa15.18■□□□□ 0.02
ZNF559-206ENST00000587557 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
ZNF559-206ENST00000587557 CENPBP07199 599 aaPredicted RBP15.17■□□□□ 0.02
ZNF559-206ENST00000587557 NEUROD1Q13562 356 aa15.17■□□□□ 0.02
ZNF559-206ENST00000587557 IGF1RP08069 1367 aa15.15■□□□□ 0.02
ZNF559-206ENST00000587557 ARHGAP35Q9NRY4 1499 aa15.14■□□□□ 0.01
ZNF559-206ENST00000587557 AEBP2Q6ZN18 517 aaPredicted RBP15.12■□□□□ 0.01
ZNF559-206ENST00000587557 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
ZNF559-206ENST00000587557 CARMIL1Q5VZK9 1371 aa15.1■□□□□ 0.01
ZNF559-206ENST00000587557 FANCD2Q9BXW9 1451 aa15.1■□□□□ 0.01
ZNF559-206ENST00000587557 RRBP1Q9P2E9 1410 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms